RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NEXMIFQ5QGS0 1516 aa21.2■□□□□ 0.98
HLA-F-229ENST00000489502 TXNDC2Q86VQ3 553 aa21.2■□□□□ 0.98
HLA-F-229ENST00000489502 EID1Q9Y6B2 187 aa21.19■□□□□ 0.98
HLA-F-229ENST00000489502 ZNF326Q5BKZ1 582 aaKnown RBP21.18■□□□□ 0.98
HLA-F-229ENST00000489502 NUTM2DQ5VT03 806 aaPredicted RBP21.18■□□□□ 0.98
HLA-F-229ENST00000489502 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
HLA-F-229ENST00000489502 SPATA31E1Q6ZUB1 1445 aa21.18■□□□□ 0.98
HLA-F-229ENST00000489502 SENP3Q9H4L4 574 aaPredicted RBP21.17■□□□□ 0.98
HLA-F-229ENST00000489502 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
HLA-F-229ENST00000489502 PPLO60437 1756 aa21.16■□□□□ 0.98
HLA-F-229ENST00000489502 PPP1R15AO75807 674 aaPredicted RBP21.15■□□□□ 0.98
HLA-F-229ENST00000489502 IFT172Q9UG01 1749 aa21.15■□□□□ 0.98
HLA-F-229ENST00000489502 PLEKHG1Q9ULL1 1385 aa21.12■□□□□ 0.97
HLA-F-229ENST00000489502 NRXN3Q9Y4C0 1643 aa21.11■□□□□ 0.97
HLA-F-229ENST00000489502 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
HLA-F-229ENST00000489502 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
HLA-F-229ENST00000489502 ZNF335Q9H4Z2 1342 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-229ENST00000489502 BCANQ96GW7 911 aa21.08■□□□□ 0.97
HLA-F-229ENST00000489502 SETBP1Q9Y6X0 1596 aa21.08■□□□□ 0.97
HLA-F-229ENST00000489502 LTBP4Q8N2S1 1624 aa21.07■□□□□ 0.96
HLA-F-229ENST00000489502 ADAMTS13Q76LX8 1427 aa21.06■□□□□ 0.96
HLA-F-229ENST00000489502 STRCP1A6NGW2 1772 aa21.06■□□□□ 0.96
HLA-F-229ENST00000489502 HDGFP51858 240 aaKnown RBP21.06■□□□□ 0.96
HLA-F-229ENST00000489502 SLC26A8Q96RN1 970 aa21.06■□□□□ 0.96
HLA-F-229ENST00000489502 DIP2AQ14689 1571 aa21.06■□□□□ 0.96
HLA-F-229ENST00000489502 RPGRIP1LQ68CZ1 1315 aa21.04■□□□□ 0.96
HLA-F-229ENST00000489502 SETD1AO15047 1707 aaKnown RBP21.02■□□□□ 0.96
HLA-F-229ENST00000489502 MYOM2P54296 1465 aa21.01■□□□□ 0.95
HLA-F-229ENST00000489502 NWD1Q149M9 1564 aa21.01■□□□□ 0.95
HLA-F-229ENST00000489502 SIN3AQ96ST3 1273 aa21■□□□□ 0.95
HLA-F-229ENST00000489502 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
HLA-F-229ENST00000489502 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
HLA-F-229ENST00000489502 ALKQ9UM73 1620 aa20.97■□□□□ 0.95
HLA-F-229ENST00000489502 PIK3C2GO75747 1445 aa20.97■□□□□ 0.95
HLA-F-229ENST00000489502 CPS1P31327 1500 aa20.97■□□□□ 0.95
HLA-F-229ENST00000489502 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
HLA-F-229ENST00000489502 NRXN1Q9ULB1 1477 aa20.96■□□□□ 0.95
HLA-F-229ENST00000489502 NEUROD1Q13562 356 aa20.95■□□□□ 0.94
HLA-F-229ENST00000489502 TBX22Q9Y458 520 aa20.94■□□□□ 0.94
HLA-F-229ENST00000489502 XRN1Q8IZH2 1706 aaKnown RBP20.94■□□□□ 0.94
HLA-F-229ENST00000489502 METP08581 1390 aa20.94■□□□□ 0.94
HLA-F-229ENST00000489502 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
HLA-F-229ENST00000489502 PTPRUQ92729 1446 aa20.93■□□□□ 0.94
HLA-F-229ENST00000489502 NKTRP30414 1462 aaKnown RBP20.93■□□□□ 0.94
HLA-F-229ENST00000489502 DCAF11Q8TEB1 546 aa20.92■□□□□ 0.94
HLA-F-229ENST00000489502 LAMC1P11047 1609 aa20.92■□□□□ 0.94
HLA-F-229ENST00000489502 LRRC7Q96NW7 1537 aa20.91■□□□□ 0.94
HLA-F-229ENST00000489502 KDM2AQ9Y2K7 1162 aa20.91■□□□□ 0.94
HLA-F-229ENST00000489502 PIK3R4Q99570 1358 aa20.9■□□□□ 0.94
HLA-F-229ENST00000489502 CERKQ8TCT0 537 aa20.9■□□□□ 0.94
HLA-F-229ENST00000489502 XIRP1Q702N8 1843 aaKnown RBP20.9■□□□□ 0.94
HLA-F-229ENST00000489502 KCNA6P17658 529 aa20.89■□□□□ 0.93
HLA-F-229ENST00000489502 L3MBTL2Q969R5 705 aa20.85■□□□□ 0.93
HLA-F-229ENST00000489502 IQSEC2Q5JU85 1478 aa20.84■□□□□ 0.93
HLA-F-229ENST00000489502 RBM33Q96EV2 1170 aaKnown RBP20.84■□□□□ 0.93
HLA-F-229ENST00000489502 AMOTL2Q9Y2J4 779 aa20.84■□□□□ 0.93
HLA-F-229ENST00000489502 PRAG1Q86YV5 1406 aa20.84■□□□□ 0.93
HLA-F-229ENST00000489502 TMEM94Q12767 1356 aa20.84■□□□□ 0.93
HLA-F-229ENST00000489502 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
HLA-F-229ENST00000489502 CFAP70Q5T0N1 1121 aa20.83■□□□□ 0.93
HLA-F-229ENST00000489502 CCER1Q8TC90 406 aaPredicted RBP20.83■□□□□ 0.93
HLA-F-229ENST00000489502 KNDC1Q76NI1 1749 aa20.82■□□□□ 0.92
HLA-F-229ENST00000489502 ADGRB1O14514 1584 aa20.82■□□□□ 0.92
HLA-F-229ENST00000489502 TMEM132EQ6IEE7 984 aa20.81■□□□□ 0.92
HLA-F-229ENST00000489502 PROSER2Q86WR7 435 aaPredicted RBP20.81■□□□□ 0.92
HLA-F-229ENST00000489502 C14orf93Q9H972 538 aaKnown RBP20.81■□□□□ 0.92
HLA-F-229ENST00000489502 PTCH1Q13635 1447 aa20.8■□□□□ 0.92
HLA-F-229ENST00000489502 KIAA1210Q9ULL0 1709 aa20.79■□□□□ 0.92
HLA-F-229ENST00000489502 STAC3Q96MF2 364 aa20.79■□□□□ 0.92
HLA-F-229ENST00000489502 CLSPNQ9HAW4 1339 aa20.78■□□□□ 0.92
HLA-F-229ENST00000489502 YTHDC2Q9H6S0 1430 aaKnown RBP20.78■□□□□ 0.92
HLA-F-229ENST00000489502 LRPPRCP42704 1394 aaKnown RBP20.78■□□□□ 0.92
HLA-F-229ENST00000489502 ROBO2Q9HCK4 1378 aa20.78■□□□□ 0.92
HLA-F-229ENST00000489502 STK26Q9P289 416 aa20.77■□□□□ 0.92
HLA-F-229ENST00000489502 NALCNQ8IZF0 1738 aa20.77■□□□□ 0.92
HLA-F-229ENST00000489502 TRPM1Q7Z4N2 1603 aa20.77■□□□□ 0.92
HLA-F-229ENST00000489502 TECPR2O15040 1411 aa20.77■□□□□ 0.91
HLA-F-229ENST00000489502 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
HLA-F-229ENST00000489502 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.72■□□□□ 0.91
HLA-F-229ENST00000489502 ABCC11Q96J66 1382 aa20.72■□□□□ 0.91
HLA-F-229ENST00000489502 ARHGEF28Q8N1W1 1705 aaKnown RBP20.71■□□□□ 0.91
HLA-F-229ENST00000489502 MSH6P52701 1360 aa20.71■□□□□ 0.91
HLA-F-229ENST00000489502 PLEKHH1Q9ULM0 1364 aa20.71■□□□□ 0.91
HLA-F-229ENST00000489502 ADGRL3Q9HAR2 1447 aa20.7■□□□□ 0.9
HLA-F-229ENST00000489502 DLC1Q96QB1 1528 aa20.7■□□□□ 0.9
HLA-F-229ENST00000489502 UBAP1LF5GYI3 381 aa20.7■□□□□ 0.9
HLA-F-229ENST00000489502 NBPF8Q3BBV2 869 aa20.7■□□□□ 0.9
HLA-F-229ENST00000489502 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
HLA-F-229ENST00000489502 NCOA3Q9Y6Q9 1424 aa20.69■□□□□ 0.9
HLA-F-229ENST00000489502 FBXO41Q8TF61 875 aa20.67■□□□□ 0.9
HLA-F-229ENST00000489502 WAPLQ7Z5K2 1190 aa20.66■□□□□ 0.9
HLA-F-229ENST00000489502 TRAK1Q9UPV9 953 aa20.66■□□□□ 0.9
HLA-F-229ENST00000489502 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
HLA-F-229ENST00000489502 RALGAPBQ86X10 1494 aa20.66■□□□□ 0.9
HLA-F-229ENST00000489502 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
HLA-F-229ENST00000489502 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
HLA-F-229ENST00000489502 DCCP43146 1447 aa20.63■□□□□ 0.89
HLA-F-229ENST00000489502 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
HLA-F-229ENST00000489502 SAFB2Q14151 953 aaKnown RBP eCLIP20.63■□□□□ 0.89
HLA-F-229ENST00000489502 PRAM1Q96QH2 718 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms