RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 RPRD2Q5VT52 1461 aaKnown RBP16.08■□□□□ 0.16
CHKB-211ENST00000489453 NKTRP30414 1462 aaKnown RBP16.07■□□□□ 0.16
CHKB-211ENST00000489453 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
CHKB-211ENST00000489453 PPP1R15AO75807 674 aaPredicted RBP16.06■□□□□ 0.16
CHKB-211ENST00000489453 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
CHKB-211ENST00000489453 FAM135BQ49AJ0 1406 aa16.05■□□□□ 0.16
CHKB-211ENST00000489453 UNC13BO14795 1591 aa16.04■□□□□ 0.16
CHKB-211ENST00000489453 MSH6P52701 1360 aa16.04■□□□□ 0.16
CHKB-211ENST00000489453 HDGFP51858 240 aaKnown RBP16.04■□□□□ 0.16
CHKB-211ENST00000489453 PHLPP1O60346 1717 aa16.03■□□□□ 0.16
CHKB-211ENST00000489453 TMEM131LA2VDJ0 1609 aa16.02■□□□□ 0.16
CHKB-211ENST00000489453 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
CHKB-211ENST00000489453 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.15
CHKB-211ENST00000489453 E9PCH4 1651 aa16.02■□□□□ 0.15
CHKB-211ENST00000489453 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
CHKB-211ENST00000489453 PLEKHG1Q9ULL1 1385 aa16■□□□□ 0.15
CHKB-211ENST00000489453 ZFYVE9O95405 1425 aa16■□□□□ 0.15
CHKB-211ENST00000489453 IQGAP3Q86VI3 1631 aa15.98■□□□□ 0.15
CHKB-211ENST00000489453 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHKB-211ENST00000489453 C14orf37Q86TY3 774 aa15.97■□□□□ 0.15
CHKB-211ENST00000489453 DIP2AQ14689 1571 aa15.96■□□□□ 0.15
CHKB-211ENST00000489453 SLAIN2Q9P270 581 aa15.95■□□□□ 0.14
CHKB-211ENST00000489453 RGS17Q9UGC6 210 aaPredicted RBP15.95■□□□□ 0.14
CHKB-211ENST00000489453 ROCK1Q13464 1354 aa15.94■□□□□ 0.14
CHKB-211ENST00000489453 NUTM2DQ5VT03 806 aaPredicted RBP15.93■□□□□ 0.14
CHKB-211ENST00000489453 SPHKAPQ2M3C7 1700 aa15.92■□□□□ 0.14
CHKB-211ENST00000489453 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.92■□□□□ 0.14
CHKB-211ENST00000489453 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
CHKB-211ENST00000489453 TRPM2O94759 1503 aa15.92■□□□□ 0.14
CHKB-211ENST00000489453 NUP155O75694 1391 aa15.91■□□□□ 0.14
CHKB-211ENST00000489453 JCADQ9P266 1359 aa15.91■□□□□ 0.14
CHKB-211ENST00000489453 ITGAEP38570 1179 aa15.91■□□□□ 0.14
CHKB-211ENST00000489453 NCOA3Q9Y6Q9 1424 aa15.91■□□□□ 0.14
CHKB-211ENST00000489453 COL16A1Q07092 1604 aaPredicted RBP15.9■□□□□ 0.14
CHKB-211ENST00000489453 PIK3R4Q99570 1358 aa15.89■□□□□ 0.13
CHKB-211ENST00000489453 ATF3P18847 181 aa15.89■□□□□ 0.13
CHKB-211ENST00000489453 SETD1AO15047 1707 aaKnown RBP15.88■□□□□ 0.13
CHKB-211ENST00000489453 ADAMTS13Q76LX8 1427 aa15.88■□□□□ 0.13
CHKB-211ENST00000489453 POTEAQ6S8J7 498 aa15.88■□□□□ 0.13
CHKB-211ENST00000489453 CADPS2Q86UW7 1296 aa15.88■□□□□ 0.13
CHKB-211ENST00000489453 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
CHKB-211ENST00000489453 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
CHKB-211ENST00000489453 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
CHKB-211ENST00000489453 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
CHKB-211ENST00000489453 AHDC1Q5TGY3 1603 aaPredicted RBP15.85■□□□□ 0.13
CHKB-211ENST00000489453 KIF1BO60333 1816 aa15.84■□□□□ 0.13
CHKB-211ENST00000489453 AMOTL2Q9Y2J4 779 aa15.83■□□□□ 0.12
CHKB-211ENST00000489453 SPATA31A6Q5VVP1 1343 aa15.83■□□□□ 0.12
CHKB-211ENST00000489453 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.12
CHKB-211ENST00000489453 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
CHKB-211ENST00000489453 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
CHKB-211ENST00000489453 SETBP1Q9Y6X0 1596 aa15.82■□□□□ 0.12
CHKB-211ENST00000489453 PTPRUQ92729 1446 aa15.8■□□□□ 0.12
CHKB-211ENST00000489453 LRP6O75581 1613 aa15.79■□□□□ 0.12
CHKB-211ENST00000489453 DCCP43146 1447 aa15.79■□□□□ 0.12
CHKB-211ENST00000489453 ZNF772Q68DY9 489 aaPredicted RBP15.79■□□□□ 0.12
CHKB-211ENST00000489453 CLTCL1P53675 1640 aa15.79■□□□□ 0.12
CHKB-211ENST00000489453 ASXL1Q8IXJ9 1541 aa15.78■□□□□ 0.12
CHKB-211ENST00000489453 NHSL1Q5SYE7 1610 aa15.77■□□□□ 0.12
CHKB-211ENST00000489453 BRINP3Q76B58 766 aa15.77■□□□□ 0.12
CHKB-211ENST00000489453 NUTM2BA6NNL0 878 aaPredicted RBP15.76■□□□□ 0.11
CHKB-211ENST00000489453 NUTM2EB1AL46 878 aaPredicted RBP15.76■□□□□ 0.11
CHKB-211ENST00000489453 NUTM2AQ8IVF1 878 aaPredicted RBP15.76■□□□□ 0.11
CHKB-211ENST00000489453 NALCNQ8IZF0 1738 aa15.76■□□□□ 0.11
CHKB-211ENST00000489453 NEXMIFQ5QGS0 1516 aa15.75■□□□□ 0.11
CHKB-211ENST00000489453 TRIM52Q96A61 297 aa15.74■□□□□ 0.11
CHKB-211ENST00000489453 MST1RQ04912 1400 aa15.73■□□□□ 0.11
CHKB-211ENST00000489453 METP08581 1390 aa15.73■□□□□ 0.11
CHKB-211ENST00000489453 ADGRL3Q9HAR2 1447 aa15.72■□□□□ 0.11
CHKB-211ENST00000489453 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
CHKB-211ENST00000489453 RXRBP28702 533 aa15.7■□□□□ 0.1
CHKB-211ENST00000489453 LRRC59Q96AG4 307 aaKnown RBP15.69■□□□□ 0.1
CHKB-211ENST00000489453 NAIPQ13075 1403 aa15.68■□□□□ 0.1
CHKB-211ENST00000489453 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
CHKB-211ENST00000489453 PPLO60437 1756 aa15.68■□□□□ 0.1
CHKB-211ENST00000489453 AFF2P51816 1311 aa15.68■□□□□ 0.1
CHKB-211ENST00000489453 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
CHKB-211ENST00000489453 PTCH1Q13635 1447 aa15.66■□□□□ 0.1
CHKB-211ENST00000489453 DDX17Q92841 729 aaKnown RBP15.65■□□□□ 0.1
CHKB-211ENST00000489453 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
CHKB-211ENST00000489453 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
CHKB-211ENST00000489453 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
CHKB-211ENST00000489453 UPF1Q92900 1129 aaKnown RBP eCLIP15.64■□□□□ 0.09
CHKB-211ENST00000489453 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
CHKB-211ENST00000489453 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
CHKB-211ENST00000489453 LAMC1P11047 1609 aa15.63■□□□□ 0.09
CHKB-211ENST00000489453 HFM1A2PYH4 1435 aa15.62■□□□□ 0.09
CHKB-211ENST00000489453 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
CHKB-211ENST00000489453 ROBO2Q9HCK4 1378 aa15.61■□□□□ 0.09
CHKB-211ENST00000489453 ADAMTS2O95450 1211 aa15.6■□□□□ 0.09
CHKB-211ENST00000489453 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
CHKB-211ENST00000489453 RBM6P78332 1123 aaKnown RBP15.59■□□□□ 0.09
CHKB-211ENST00000489453 QTRT2Q9H974 415 aaKnown RBP15.59■□□□□ 0.09
CHKB-211ENST00000489453 RGS12O14924 1447 aa15.58■□□□□ 0.08
CHKB-211ENST00000489453 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.08
CHKB-211ENST00000489453 ORAI2Q96SN7 254 aa15.57■□□□□ 0.08
CHKB-211ENST00000489453 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
CHKB-211ENST00000489453 IFT172Q9UG01 1749 aa15.57■□□□□ 0.08
CHKB-211ENST00000489453 MARF1Q9Y4F3 1742 aaKnown RBP15.57■□□□□ 0.08
CHKB-211ENST00000489453 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms