RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 GCC2Q8IWJ2 1684 aa14.46□□□□□ -0.09
SNX17-207ENST00000489402 MYO5BQ9ULV0 1848 aa14.46□□□□□ -0.09
SNX17-207ENST00000489402 NKTRP30414 1462 aaKnown RBP14.45□□□□□ -0.1
SNX17-207ENST00000489402 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
SNX17-207ENST00000489402 UNC13BO14795 1591 aa14.44□□□□□ -0.1
SNX17-207ENST00000489402 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
SNX17-207ENST00000489402 PROSER2Q86WR7 435 aaPredicted RBP14.44□□□□□ -0.1
SNX17-207ENST00000489402 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
SNX17-207ENST00000489402 HDGFP51858 240 aaKnown RBP14.43□□□□□ -0.1
SNX17-207ENST00000489402 ROBO1Q9Y6N7 1651 aa14.42□□□□□ -0.1
SNX17-207ENST00000489402 ZFYVE9O95405 1425 aa14.41□□□□□ -0.1
SNX17-207ENST00000489402 RIMS2Q9UQ26 1411 aa14.41□□□□□ -0.1
SNX17-207ENST00000489402 TMEM131LA2VDJ0 1609 aa14.41□□□□□ -0.1
SNX17-207ENST00000489402 RGS17Q9UGC6 210 aaPredicted RBP14.41□□□□□ -0.1
SNX17-207ENST00000489402 MSH6P52701 1360 aa14.41□□□□□ -0.1
SNX17-207ENST00000489402 PLEKHG1Q9ULL1 1385 aa14.41□□□□□ -0.1
SNX17-207ENST00000489402 NUTM2DQ5VT03 806 aaPredicted RBP14.4□□□□□ -0.1
SNX17-207ENST00000489402 E9PCH4 1651 aa14.39□□□□□ -0.11
SNX17-207ENST00000489402 CHD2O14647 1828 aaKnown RBP14.39□□□□□ -0.11
SNX17-207ENST00000489402 ROCK1Q13464 1354 aa14.39□□□□□ -0.11
SNX17-207ENST00000489402 IQGAP3Q86VI3 1631 aa14.39□□□□□ -0.11
SNX17-207ENST00000489402 CHGAP10645 457 aaKnown RBP14.38□□□□□ -0.11
SNX17-207ENST00000489402 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX17-207ENST00000489402 ITGAEP38570 1179 aa14.37□□□□□ -0.11
SNX17-207ENST00000489402 DIP2AQ14689 1571 aa14.36□□□□□ -0.11
SNX17-207ENST00000489402 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
SNX17-207ENST00000489402 PHLPP1O60346 1717 aa14.35□□□□□ -0.11
SNX17-207ENST00000489402 SLAIN2Q9P270 581 aa14.34□□□□□ -0.11
SNX17-207ENST00000489402 NUP155O75694 1391 aa14.34□□□□□ -0.11
SNX17-207ENST00000489402 C14orf37Q86TY3 774 aa14.33□□□□□ -0.12
SNX17-207ENST00000489402 NCOA3Q9Y6Q9 1424 aa14.32□□□□□ -0.12
SNX17-207ENST00000489402 TRPM2O94759 1503 aa14.31□□□□□ -0.12
SNX17-207ENST00000489402 PIK3R4Q99570 1358 aa14.31□□□□□ -0.12
SNX17-207ENST00000489402 ADAMTS13Q76LX8 1427 aa14.31□□□□□ -0.12
SNX17-207ENST00000489402 POTEAQ6S8J7 498 aa14.3□□□□□ -0.12
SNX17-207ENST00000489402 JCADQ9P266 1359 aa14.3□□□□□ -0.12
SNX17-207ENST00000489402 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
SNX17-207ENST00000489402 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
SNX17-207ENST00000489402 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.29□□□□□ -0.12
SNX17-207ENST00000489402 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
SNX17-207ENST00000489402 COL16A1Q07092 1604 aaPredicted RBP14.27□□□□□ -0.12
SNX17-207ENST00000489402 ATF3P18847 181 aa14.27□□□□□ -0.13
SNX17-207ENST00000489402 C19orf44Q9H6X5 657 aa14.27□□□□□ -0.13
SNX17-207ENST00000489402 NRXN3Q9Y4C0 1643 aa14.25□□□□□ -0.13
SNX17-207ENST00000489402 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
SNX17-207ENST00000489402 ZNF326Q5BKZ1 582 aaKnown RBP14.24□□□□□ -0.13
SNX17-207ENST00000489402 AMOTL2Q9Y2J4 779 aa14.24□□□□□ -0.13
SNX17-207ENST00000489402 SETBP1Q9Y6X0 1596 aa14.24□□□□□ -0.13
SNX17-207ENST00000489402 XRN1Q8IZH2 1706 aaKnown RBP14.24□□□□□ -0.13
SNX17-207ENST00000489402 DCCP43146 1447 aa14.23□□□□□ -0.13
SNX17-207ENST00000489402 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
SNX17-207ENST00000489402 MEX3CQ5U5Q3 659 aaKnown RBP14.22□□□□□ -0.13
SNX17-207ENST00000489402 SHPRHQ149N8 1683 aa14.22□□□□□ -0.13
SNX17-207ENST00000489402 KIF1BO60333 1816 aa14.2□□□□□ -0.14
SNX17-207ENST00000489402 LRP6O75581 1613 aa14.2□□□□□ -0.14
SNX17-207ENST00000489402 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
SNX17-207ENST00000489402 METP08581 1390 aa14.2□□□□□ -0.14
SNX17-207ENST00000489402 SETD1AO15047 1707 aaKnown RBP14.19□□□□□ -0.14
SNX17-207ENST00000489402 RRBP1Q9P2E9 1410 aaKnown RBP14.18□□□□□ -0.14
SNX17-207ENST00000489402 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
SNX17-207ENST00000489402 NEXMIFQ5QGS0 1516 aa14.18□□□□□ -0.14
SNX17-207ENST00000489402 ASXL1Q8IXJ9 1541 aa14.17□□□□□ -0.14
SNX17-207ENST00000489402 ZNF772Q68DY9 489 aaPredicted RBP14.17□□□□□ -0.14
SNX17-207ENST00000489402 DDX17Q92841 729 aaKnown RBP14.17□□□□□ -0.14
SNX17-207ENST00000489402 NAIPQ13075 1403 aa14.16□□□□□ -0.14
SNX17-207ENST00000489402 MST1RQ04912 1400 aa14.15□□□□□ -0.14
SNX17-207ENST00000489402 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
SNX17-207ENST00000489402 NHSL1Q5SYE7 1610 aa14.15□□□□□ -0.14
SNX17-207ENST00000489402 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
SNX17-207ENST00000489402 NALCNQ8IZF0 1738 aa14.14□□□□□ -0.15
SNX17-207ENST00000489402 NUTM2BA6NNL0 878 aaPredicted RBP14.13□□□□□ -0.15
SNX17-207ENST00000489402 NUTM2EB1AL46 878 aaPredicted RBP14.13□□□□□ -0.15
SNX17-207ENST00000489402 NUTM2AQ8IVF1 878 aaPredicted RBP14.13□□□□□ -0.15
SNX17-207ENST00000489402 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
SNX17-207ENST00000489402 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
SNX17-207ENST00000489402 HFM1A2PYH4 1435 aa14.11□□□□□ -0.15
SNX17-207ENST00000489402 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
SNX17-207ENST00000489402 PTCH1Q13635 1447 aa14.1□□□□□ -0.15
SNX17-207ENST00000489402 RXRBP28702 533 aa14.09□□□□□ -0.15
SNX17-207ENST00000489402 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
SNX17-207ENST00000489402 RPGRIP1LQ68CZ1 1315 aa14.09□□□□□ -0.15
SNX17-207ENST00000489402 PPLO60437 1756 aa14.08□□□□□ -0.16
SNX17-207ENST00000489402 AFF2P51816 1311 aa14.07□□□□□ -0.16
SNX17-207ENST00000489402 PNPLA6Q8IY17 1366 aa14.07□□□□□ -0.16
SNX17-207ENST00000489402 ROBO2Q9HCK4 1378 aa14.07□□□□□ -0.16
SNX17-207ENST00000489402 C1orf167Q5SNV9 1468 aa14.06□□□□□ -0.16
SNX17-207ENST00000489402 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
SNX17-207ENST00000489402 PRAG1Q86YV5 1406 aa14.06□□□□□ -0.16
SNX17-207ENST00000489402 C8orf37Q96NL8 207 aa14.05□□□□□ -0.16
SNX17-207ENST00000489402 LAMC1P11047 1609 aa14.04□□□□□ -0.16
SNX17-207ENST00000489402 ORAI2Q96SN7 254 aa14.04□□□□□ -0.16
SNX17-207ENST00000489402 UPF1Q92900 1129 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNX17-207ENST00000489402 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.16
SNX17-207ENST00000489402 ADGRF5Q8IZF2 1346 aa14.01□□□□□ -0.17
SNX17-207ENST00000489402 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
SNX17-207ENST00000489402 SOS2Q07890 1332 aaPredicted RBP14□□□□□ -0.17
SNX17-207ENST00000489402 ADAMTS2O95450 1211 aa14□□□□□ -0.17
SNX17-207ENST00000489402 NGLY1Q96IV0 654 aa14□□□□□ -0.17
SNX17-207ENST00000489402 QTRT2Q9H974 415 aaKnown RBP14□□□□□ -0.17
SNX17-207ENST00000489402 RBM6P78332 1123 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms