RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 SPHKAPQ2M3C7 1700 aa21.47■■□□□ 1.03
PLS3-207ENST00000489283 NUP155O75694 1391 aa21.47■■□□□ 1.03
PLS3-207ENST00000489283 RIMS2Q9UQ26 1411 aa21.46■■□□□ 1.03
PLS3-207ENST00000489283 ILDR2Q71H61 639 aa21.44■■□□□ 1.02
PLS3-207ENST00000489283 SLC26A8Q96RN1 970 aa21.44■■□□□ 1.02
PLS3-207ENST00000489283 MED1Q15648 1581 aaPredicted RBP21.44■■□□□ 1.02
PLS3-207ENST00000489283 CHD2O14647 1828 aaKnown RBP21.43■■□□□ 1.02
PLS3-207ENST00000489283 NKTRP30414 1462 aaKnown RBP21.43■■□□□ 1.02
PLS3-207ENST00000489283 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
PLS3-207ENST00000489283 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
PLS3-207ENST00000489283 KCNA6P17658 529 aa21.4■■□□□ 1.02
PLS3-207ENST00000489283 TMEM94Q12767 1356 aa21.39■■□□□ 1.02
PLS3-207ENST00000489283 BCANQ96GW7 911 aa21.39■■□□□ 1.01
PLS3-207ENST00000489283 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
PLS3-207ENST00000489283 PPP1R15AO75807 674 aaPredicted RBP21.38■■□□□ 1.01
PLS3-207ENST00000489283 NAIPQ13075 1403 aa21.38■■□□□ 1.01
PLS3-207ENST00000489283 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
PLS3-207ENST00000489283 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
PLS3-207ENST00000489283 CLTCL1P53675 1640 aa21.35■■□□□ 1.01
PLS3-207ENST00000489283 ROBO1Q9Y6N7 1651 aa21.34■■□□□ 1.01
PLS3-207ENST00000489283 ADAMTS13Q76LX8 1427 aa21.33■■□□□ 1.01
PLS3-207ENST00000489283 PROSER2Q86WR7 435 aaPredicted RBP21.33■■□□□ 1.01
PLS3-207ENST00000489283 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
PLS3-207ENST00000489283 NUTM2DQ5VT03 806 aaPredicted RBP21.32■■□□□ 1
PLS3-207ENST00000489283 RBM33Q96EV2 1170 aaKnown RBP21.32■■□□□ 1
PLS3-207ENST00000489283 TRPM2O94759 1503 aa21.32■■□□□ 1
PLS3-207ENST00000489283 NRXN3Q9Y4C0 1643 aa21.31■■□□□ 1
PLS3-207ENST00000489283 KIF1BO60333 1816 aa21.31■■□□□ 1
PLS3-207ENST00000489283 HFM1A2PYH4 1435 aa21.3■■□□□ 1
PLS3-207ENST00000489283 TBX22Q9Y458 520 aa21.28■■□□□ 1
PLS3-207ENST00000489283 FAM135BQ49AJ0 1406 aa21.28■■□□□ 1
PLS3-207ENST00000489283 SETBP1Q9Y6X0 1596 aa21.27■■□□□ 1
PLS3-207ENST00000489283 MSH6P52701 1360 aa21.27■■□□□ 1
PLS3-207ENST00000489283 SOCS7O14512 581 aa21.26■□□□□ 0.99
PLS3-207ENST00000489283 NEXMIFQ5QGS0 1516 aa21.25■□□□□ 0.99
PLS3-207ENST00000489283 PIK3R4Q99570 1358 aa21.24■□□□□ 0.99
PLS3-207ENST00000489283 XRN1Q8IZH2 1706 aaKnown RBP21.24■□□□□ 0.99
PLS3-207ENST00000489283 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.24■□□□□ 0.99
PLS3-207ENST00000489283 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
PLS3-207ENST00000489283 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
PLS3-207ENST00000489283 ZNF326Q5BKZ1 582 aaKnown RBP21.21■□□□□ 0.99
PLS3-207ENST00000489283 NCOA3Q9Y6Q9 1424 aa21.21■□□□□ 0.99
PLS3-207ENST00000489283 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
PLS3-207ENST00000489283 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
PLS3-207ENST00000489283 SETD1AO15047 1707 aaKnown RBP21.16■□□□□ 0.98
PLS3-207ENST00000489283 PPLO60437 1756 aa21.15■□□□□ 0.98
PLS3-207ENST00000489283 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
PLS3-207ENST00000489283 AMOTL2Q9Y2J4 779 aa21.15■□□□□ 0.98
PLS3-207ENST00000489283 SLAIN2Q9P270 581 aa21.14■□□□□ 0.97
PLS3-207ENST00000489283 COL16A1Q07092 1604 aaPredicted RBP21.14■□□□□ 0.97
PLS3-207ENST00000489283 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
PLS3-207ENST00000489283 METP08581 1390 aa21.12■□□□□ 0.97
PLS3-207ENST00000489283 NALCNQ8IZF0 1738 aa21.12■□□□□ 0.97
PLS3-207ENST00000489283 AHDC1Q5TGY3 1603 aaPredicted RBP21.1■□□□□ 0.97
PLS3-207ENST00000489283 C19orf44Q9H6X5 657 aa21.09■□□□□ 0.97
PLS3-207ENST00000489283 DCCP43146 1447 aa21.08■□□□□ 0.97
PLS3-207ENST00000489283 CADPS2Q86UW7 1296 aa21.08■□□□□ 0.97
PLS3-207ENST00000489283 ATF3P18847 181 aa21.07■□□□□ 0.96
PLS3-207ENST00000489283 IFT172Q9UG01 1749 aa21.07■□□□□ 0.96
PLS3-207ENST00000489283 FOXD1Q16676 465 aa21.05■□□□□ 0.96
PLS3-207ENST00000489283 JCADQ9P266 1359 aa21.04■□□□□ 0.96
PLS3-207ENST00000489283 SHPRHQ149N8 1683 aa21.04■□□□□ 0.96
PLS3-207ENST00000489283 ADGRL3Q9HAR2 1447 aa21.04■□□□□ 0.96
PLS3-207ENST00000489283 NHSL1Q5SYE7 1610 aa21.03■□□□□ 0.96
PLS3-207ENST00000489283 ASXL1Q8IXJ9 1541 aa21.03■□□□□ 0.96
PLS3-207ENST00000489283 MST1RQ04912 1400 aa21.03■□□□□ 0.96
PLS3-207ENST00000489283 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.96
PLS3-207ENST00000489283 RGS17Q9UGC6 210 aaPredicted RBP21.02■□□□□ 0.96
PLS3-207ENST00000489283 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
PLS3-207ENST00000489283 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.95
PLS3-207ENST00000489283 PTCH1Q13635 1447 aa21.01■□□□□ 0.95
PLS3-207ENST00000489283 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
PLS3-207ENST00000489283 SPATA31E1Q6ZUB1 1445 aa20.98■□□□□ 0.95
PLS3-207ENST00000489283 PRAG1Q86YV5 1406 aa20.98■□□□□ 0.95
PLS3-207ENST00000489283 BRINP3Q76B58 766 aa20.98■□□□□ 0.95
PLS3-207ENST00000489283 LRP6O75581 1613 aa20.97■□□□□ 0.95
PLS3-207ENST00000489283 ROBO2Q9HCK4 1378 aa20.96■□□□□ 0.95
PLS3-207ENST00000489283 SETD5Q9C0A6 1442 aa20.95■□□□□ 0.95
PLS3-207ENST00000489283 KNDC1Q76NI1 1749 aa20.93■□□□□ 0.94
PLS3-207ENST00000489283 SPATA31A6Q5VVP1 1343 aa20.92■□□□□ 0.94
PLS3-207ENST00000489283 LAMC1P11047 1609 aa20.91■□□□□ 0.94
PLS3-207ENST00000489283 POTEAQ6S8J7 498 aa20.91■□□□□ 0.94
PLS3-207ENST00000489283 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
PLS3-207ENST00000489283 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
PLS3-207ENST00000489283 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
PLS3-207ENST00000489283 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
PLS3-207ENST00000489283 C1orf167Q5SNV9 1468 aa20.89■□□□□ 0.94
PLS3-207ENST00000489283 ACIN1Q9UKV3 1341 aaKnown RBP20.89■□□□□ 0.93
PLS3-207ENST00000489283 CDC42BPGQ6DT37 1551 aa20.89■□□□□ 0.93
PLS3-207ENST00000489283 PIK3C2GO75747 1445 aa20.88■□□□□ 0.93
PLS3-207ENST00000489283 MEX3CQ5U5Q3 659 aaKnown RBP20.85■□□□□ 0.93
PLS3-207ENST00000489283 TECPR2O15040 1411 aa20.85■□□□□ 0.93
PLS3-207ENST00000489283 DDX17Q92841 729 aaKnown RBP20.84■□□□□ 0.93
PLS3-207ENST00000489283 MYOM2P54296 1465 aa20.83■□□□□ 0.93
PLS3-207ENST00000489283 LRPPRCP42704 1394 aaKnown RBP20.83■□□□□ 0.92
PLS3-207ENST00000489283 NRXN1Q9ULB1 1477 aa20.81■□□□□ 0.92
PLS3-207ENST00000489283 PNPLA6Q8IY17 1366 aa20.81■□□□□ 0.92
PLS3-207ENST00000489283 NUTM2BA6NNL0 878 aaPredicted RBP20.8■□□□□ 0.92
PLS3-207ENST00000489283 NUTM2EB1AL46 878 aaPredicted RBP20.8■□□□□ 0.92
PLS3-207ENST00000489283 NUTM2AQ8IVF1 878 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms