RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 KDM2AQ9Y2K7 1162 aa26.08■■□□□ 1.77
C9orf16-203ENST00000489240 MYOM2P54296 1465 aa26.08■■□□□ 1.77
C9orf16-203ENST00000489240 UHRF1BP1Q6BDS2 1440 aa26.06■■□□□ 1.76
C9orf16-203ENST00000489240 VGFO15240 615 aaPredicted RBP26.01■■□□□ 1.75
C9orf16-203ENST00000489240 ZFYVE9O95405 1425 aa26.01■■□□□ 1.75
C9orf16-203ENST00000489240 PRAG1Q86YV5 1406 aa26.01■■□□□ 1.75
C9orf16-203ENST00000489240 THEMISQ8N1K5 641 aaPredicted RBP26.01■■□□□ 1.75
C9orf16-203ENST00000489240 RIMS2Q9UQ26 1411 aa26.01■■□□□ 1.75
C9orf16-203ENST00000489240 TRPM1Q7Z4N2 1603 aa26■■□□□ 1.75
C9orf16-203ENST00000489240 HDGFP51858 240 aaKnown RBP26■■□□□ 1.75
C9orf16-203ENST00000489240 KIAA1210Q9ULL0 1709 aa26■■□□□ 1.75
C9orf16-203ENST00000489240 SLIT1O75093 1534 aa25.98■■□□□ 1.75
C9orf16-203ENST00000489240 NRXN1Q9ULB1 1477 aa25.98■■□□□ 1.75
C9orf16-203ENST00000489240 TMEM2Q9UHN6 1383 aa25.98■■□□□ 1.75
C9orf16-203ENST00000489240 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
C9orf16-203ENST00000489240 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.98■■□□□ 1.75
C9orf16-203ENST00000489240 ARHGAP23Q9P227 1491 aa25.96■■□□□ 1.75
C9orf16-203ENST00000489240 LAMC1P11047 1609 aa25.95■■□□□ 1.74
C9orf16-203ENST00000489240 ADGRF5Q8IZF2 1346 aa25.94■■□□□ 1.74
C9orf16-203ENST00000489240 RALGAPBQ86X10 1494 aa25.94■■□□□ 1.74
C9orf16-203ENST00000489240 PIK3C2GO75747 1445 aa25.91■■□□□ 1.74
C9orf16-203ENST00000489240 NUTM2DQ5VT03 806 aaPredicted RBP25.91■■□□□ 1.74
C9orf16-203ENST00000489240 EID1Q9Y6B2 187 aa25.91■■□□□ 1.74
C9orf16-203ENST00000489240 POLR1AO95602 1720 aaPredicted RBP25.89■■□□□ 1.74
C9orf16-203ENST00000489240 TXNDC2Q86VQ3 553 aa25.86■■□□□ 1.73
C9orf16-203ENST00000489240 IQGAP1P46940 1657 aa25.86■■□□□ 1.73
C9orf16-203ENST00000489240 SCAF11Q99590 1463 aaKnown RBP25.85■■□□□ 1.73
C9orf16-203ENST00000489240 SETBP1Q9Y6X0 1596 aa25.85■■□□□ 1.73
C9orf16-203ENST00000489240 ROCK2O75116 1388 aaKnown RBP25.84■■□□□ 1.73
C9orf16-203ENST00000489240 NRXN3Q9Y4C0 1643 aa25.84■■□□□ 1.73
C9orf16-203ENST00000489240 LTKP29376 864 aa25.83■■□□□ 1.73
C9orf16-203ENST00000489240 PLEKHG1Q9ULL1 1385 aa25.82■■□□□ 1.72
C9orf16-203ENST00000489240 ALKQ9UM73 1620 aa25.82■■□□□ 1.72
C9orf16-203ENST00000489240 ANKLE2Q86XL3 938 aa25.82■■□□□ 1.72
C9orf16-203ENST00000489240 C14orf93Q9H972 538 aaKnown RBP25.82■■□□□ 1.72
C9orf16-203ENST00000489240 SETD1AO15047 1707 aaKnown RBP25.82■■□□□ 1.72
C9orf16-203ENST00000489240 LMTK3Q96Q04 1460 aa25.81■■□□□ 1.72
C9orf16-203ENST00000489240 CFAP70Q5T0N1 1121 aa25.81■■□□□ 1.72
C9orf16-203ENST00000489240 GPRASP1Q5JY77 1395 aa25.81■■□□□ 1.72
C9orf16-203ENST00000489240 CARD11Q9BXL7 1154 aa25.79■■□□□ 1.72
C9orf16-203ENST00000489240 NBPF1Q3BBV0 1214 aa25.78■■□□□ 1.72
C9orf16-203ENST00000489240 BCANQ96GW7 911 aa25.77■■□□□ 1.72
C9orf16-203ENST00000489240 DIP2AQ14689 1571 aa25.77■■□□□ 1.72
C9orf16-203ENST00000489240 ADGRB1O14514 1584 aa25.75■■□□□ 1.71
C9orf16-203ENST00000489240 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
C9orf16-203ENST00000489240 MED14O60244 1454 aa25.72■■□□□ 1.71
C9orf16-203ENST00000489240 EIF4G2P78344 907 aaKnown RBP eCLIP25.72■■□□□ 1.71
C9orf16-203ENST00000489240 ADAMTS13Q76LX8 1427 aa25.71■■□□□ 1.71
C9orf16-203ENST00000489240 ASXL1Q8IXJ9 1541 aa25.71■■□□□ 1.71
C9orf16-203ENST00000489240 USP47Q96K76 1375 aa25.7■■□□□ 1.71
C9orf16-203ENST00000489240 NPHP4O75161 1426 aaPredicted RBP25.69■■□□□ 1.7
C9orf16-203ENST00000489240 HSPA2P54652 639 aa25.68■■□□□ 1.7
C9orf16-203ENST00000489240 NCKAP5LQ9HCH0 1330 aa25.67■■□□□ 1.7
C9orf16-203ENST00000489240 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
C9orf16-203ENST00000489240 TMEM132EQ6IEE7 984 aa25.67■■□□□ 1.7
C9orf16-203ENST00000489240 TBX22Q9Y458 520 aa25.67■■□□□ 1.7
C9orf16-203ENST00000489240 ARHGEF28Q8N1W1 1705 aaKnown RBP25.66■■□□□ 1.7
C9orf16-203ENST00000489240 KNDC1Q76NI1 1749 aa25.66■■□□□ 1.7
C9orf16-203ENST00000489240 HSPA5P11021 654 aaKnown RBP25.65■■□□□ 1.7
C9orf16-203ENST00000489240 EIF3AQ14152 1382 aaKnown RBP25.65■■□□□ 1.7
C9orf16-203ENST00000489240 YTHDC2Q9H6S0 1430 aaKnown RBP25.64■■□□□ 1.7
C9orf16-203ENST00000489240 SLC26A8Q96RN1 970 aa25.64■■□□□ 1.7
C9orf16-203ENST00000489240 METP08581 1390 aa25.62■■□□□ 1.69
C9orf16-203ENST00000489240 CHD2O14647 1828 aaKnown RBP25.62■■□□□ 1.69
C9orf16-203ENST00000489240 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
C9orf16-203ENST00000489240 PIK3R4Q99570 1358 aa25.6■■□□□ 1.69
C9orf16-203ENST00000489240 DLC1Q96QB1 1528 aa25.59■■□□□ 1.69
C9orf16-203ENST00000489240 ZNF316A6NFI3 1004 aaPredicted RBP25.59■■□□□ 1.69
C9orf16-203ENST00000489240 TRAK1Q9UPV9 953 aa25.58■■□□□ 1.69
C9orf16-203ENST00000489240 QRICH2Q9H0J4 1663 aa25.58■■□□□ 1.68
C9orf16-203ENST00000489240 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
C9orf16-203ENST00000489240 ST20-MTHFSA0A0A6YYL1 179 aa25.57■■□□□ 1.68
C9orf16-203ENST00000489240 STK26Q9P289 416 aa25.57■■□□□ 1.68
C9orf16-203ENST00000489240 XRN1Q8IZH2 1706 aaKnown RBP25.56■■□□□ 1.68
C9orf16-203ENST00000489240 CPS1P31327 1500 aa25.56■■□□□ 1.68
C9orf16-203ENST00000489240 HIRIP3Q9BW71 556 aaPredicted RBP25.55■■□□□ 1.68
C9orf16-203ENST00000489240 TECPR2O15040 1411 aa25.54■■□□□ 1.68
C9orf16-203ENST00000489240 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
C9orf16-203ENST00000489240 CENPJQ9HC77 1338 aaPredicted RBP25.52■■□□□ 1.68
C9orf16-203ENST00000489240 PTPRUQ92729 1446 aa25.52■■□□□ 1.68
C9orf16-203ENST00000489240 SLC24A1O60721 1099 aa25.51■■□□□ 1.67
C9orf16-203ENST00000489240 SIRT1Q96EB6 747 aa25.5■■□□□ 1.67
C9orf16-203ENST00000489240 FAM135BQ49AJ0 1406 aa25.49■■□□□ 1.67
C9orf16-203ENST00000489240 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
C9orf16-203ENST00000489240 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
C9orf16-203ENST00000489240 SBNO2Q9Y2G9 1366 aa25.48■■□□□ 1.67
C9orf16-203ENST00000489240 POGKQ9P215 609 aa25.48■■□□□ 1.67
C9orf16-203ENST00000489240 DMRT2Q9Y5R5 561 aa25.48■■□□□ 1.67
C9orf16-203ENST00000489240 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
C9orf16-203ENST00000489240 PRAM1Q96QH2 718 aa25.46■■□□□ 1.67
C9orf16-203ENST00000489240 TESK2Q96S53 571 aa25.46■■□□□ 1.67
C9orf16-203ENST00000489240 KCNA6P17658 529 aa25.43■■□□□ 1.66
C9orf16-203ENST00000489240 ROBO2Q9HCK4 1378 aa25.43■■□□□ 1.66
C9orf16-203ENST00000489240 TMF1P82094 1093 aa25.42■■□□□ 1.66
C9orf16-203ENST00000489240 STRCP1A6NGW2 1772 aa25.41■■□□□ 1.66
C9orf16-203ENST00000489240 WAPLQ7Z5K2 1190 aa25.4■■□□□ 1.66
C9orf16-203ENST00000489240 NKTRP30414 1462 aaKnown RBP25.4■■□□□ 1.66
C9orf16-203ENST00000489240 SAFB2Q14151 953 aaKnown RBP eCLIP25.39■■□□□ 1.66
C9orf16-203ENST00000489240 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.38■■□□□ 1.65
C9orf16-203ENST00000489240 PLEKHH1Q9ULM0 1364 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms