RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 PANK3Q9H999 370 aa26.29■■□□□ 1.8
SYNGR1-207ENST00000489206 CDCA8Q53HL2 280 aa26.29■■□□□ 1.8
SYNGR1-207ENST00000489206 MAP3K4Q9Y6R4 1608 aa26.28■■□□□ 1.8
SYNGR1-207ENST00000489206 ZNF518AQ6AHZ1 1483 aa26.28■■□□□ 1.8
SYNGR1-207ENST00000489206 PDE3BQ13370 1112 aa26.28■■□□□ 1.8
SYNGR1-207ENST00000489206 EIF3AQ14152 1382 aaKnown RBP26.27■■□□□ 1.8
SYNGR1-207ENST00000489206 BLMP54132 1417 aaPredicted RBP26.27■■□□□ 1.8
SYNGR1-207ENST00000489206 KIF3BO15066 747 aa26.26■■□□□ 1.79
SYNGR1-207ENST00000489206 B4GALNT3Q6L9W6 998 aa26.26■■□□□ 1.79
SYNGR1-207ENST00000489206 ANP32EQ9BTT0 268 aa26.25■■□□□ 1.79
SYNGR1-207ENST00000489206 KDM5AP29375 1690 aaKnown RBP26.24■■□□□ 1.79
SYNGR1-207ENST00000489206 MYOM1P52179 1685 aa26.24■■□□□ 1.79
SYNGR1-207ENST00000489206 PPRC1Q5VV67 1664 aaKnown RBP26.24■■□□□ 1.79
SYNGR1-207ENST00000489206 FANCIQ9NVI1 1328 aa26.23■■□□□ 1.79
SYNGR1-207ENST00000489206 ABCA6Q8N139 1617 aa26.23■■□□□ 1.79
SYNGR1-207ENST00000489206 DIP2BQ9P265 1576 aa26.22■■□□□ 1.79
SYNGR1-207ENST00000489206 SLC24A1O60721 1099 aa26.21■■□□□ 1.79
SYNGR1-207ENST00000489206 CC2D1BQ5T0F9 858 aaKnown RBP26.2■■□□□ 1.79
SYNGR1-207ENST00000489206 MYT1LQ9UL68 1186 aa26.2■■□□□ 1.78
SYNGR1-207ENST00000489206 MROH2AA6NES4 1674 aa26.19■■□□□ 1.78
SYNGR1-207ENST00000489206 FAM69CQ0P6D2 419 aa26.18■■□□□ 1.78
SYNGR1-207ENST00000489206 MYO3AQ8NEV4 1616 aa26.17■■□□□ 1.78
SYNGR1-207ENST00000489206 ASXL1Q8IXJ9 1541 aa26.17■■□□□ 1.78
SYNGR1-207ENST00000489206 NRXN1Q9ULB1 1477 aa26.16■■□□□ 1.78
SYNGR1-207ENST00000489206 NPC1L1Q9UHC9 1359 aa26.16■■□□□ 1.78
SYNGR1-207ENST00000489206 HECW2Q9P2P5 1572 aa26.16■■□□□ 1.78
SYNGR1-207ENST00000489206 MLH3Q9UHC1 1453 aa26.16■■□□□ 1.78
SYNGR1-207ENST00000489206 TSPOAP1O95153 1857 aa26.15■■□□□ 1.78
SYNGR1-207ENST00000489206 POGZQ7Z3K3 1410 aa26.15■■□□□ 1.78
SYNGR1-207ENST00000489206 UGGT1Q9NYU2 1555 aa26.15■■□□□ 1.78
SYNGR1-207ENST00000489206 KNSTRNQ9Y448 316 aa26.15■■□□□ 1.78
SYNGR1-207ENST00000489206 ADGRB3O60242 1522 aa26.14■■□□□ 1.78
SYNGR1-207ENST00000489206 RRP1P56182 461 aaKnown RBP26.12■■□□□ 1.77
SYNGR1-207ENST00000489206 SETBP1Q9Y6X0 1596 aa26.12■■□□□ 1.77
SYNGR1-207ENST00000489206 CCDC136Q96JN2 1154 aa26.11■■□□□ 1.77
SYNGR1-207ENST00000489206 CD109Q6YHK3 1445 aa26.11■■□□□ 1.77
SYNGR1-207ENST00000489206 RCAN3Q9UKA8 241 aa26.1■■□□□ 1.77
SYNGR1-207ENST00000489206 FRMPD1Q5SYB0 1578 aa26.1■■□□□ 1.77
SYNGR1-207ENST00000489206 PIK3C2GO75747 1445 aa26.1■■□□□ 1.77
SYNGR1-207ENST00000489206 PPLO60437 1756 aa26.09■■□□□ 1.77
SYNGR1-207ENST00000489206 AMER1Q5JTC6 1135 aaPredicted RBP26.09■■□□□ 1.77
SYNGR1-207ENST00000489206 SENP3-EIF4A1A0A087X0R7 540 aa26.07■■□□□ 1.76
SYNGR1-207ENST00000489206 SBNO2Q9Y2G9 1366 aa26.06■■□□□ 1.76
SYNGR1-207ENST00000489206 PPP2R1AP30153 589 aa26.06■■□□□ 1.76
SYNGR1-207ENST00000489206 ERVK-7P63135 1459 aa26.05■■□□□ 1.76
SYNGR1-207ENST00000489206 ADGRF5Q8IZF2 1346 aa26.03■■□□□ 1.76
SYNGR1-207ENST00000489206 NEO1Q92859 1461 aa26.03■■□□□ 1.76
SYNGR1-207ENST00000489206 CFAP70Q5T0N1 1121 aa26.02■■□□□ 1.76
SYNGR1-207ENST00000489206 ZC3H13Q5T200 1668 aaKnown RBP26.02■■□□□ 1.76
SYNGR1-207ENST00000489206 NPATQ14207 1427 aa26.01■■□□□ 1.75
SYNGR1-207ENST00000489206 CAMSAP1Q5T5Y3 1602 aa26■■□□□ 1.75
SYNGR1-207ENST00000489206 GLI2P10070 1586 aa26■■□□□ 1.75
SYNGR1-207ENST00000489206 ABCC3O15438 1527 aa26■■□□□ 1.75
SYNGR1-207ENST00000489206 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
SYNGR1-207ENST00000489206 WDR43Q15061 677 aaKnown RBP eCLIP25.98■■□□□ 1.75
SYNGR1-207ENST00000489206 NOS1P29475 1434 aa25.98■■□□□ 1.75
SYNGR1-207ENST00000489206 MSH5O43196 834 aa25.97■■□□□ 1.75
SYNGR1-207ENST00000489206 ADAMTS8Q9UP79 889 aa25.96■■□□□ 1.75
SYNGR1-207ENST00000489206 CDCA7LQ96GN5 454 aa25.96■■□□□ 1.75
SYNGR1-207ENST00000489206 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.75
SYNGR1-207ENST00000489206 RPGRIP1LQ68CZ1 1315 aa25.95■■□□□ 1.74
SYNGR1-207ENST00000489206 QRICH2Q9H0J4 1663 aa25.95■■□□□ 1.74
SYNGR1-207ENST00000489206 PIK3C2BO00750 1634 aa25.94■■□□□ 1.74
SYNGR1-207ENST00000489206 ADGRB1O14514 1584 aa25.92■■□□□ 1.74
SYNGR1-207ENST00000489206 DIP2CQ9Y2E4 1556 aa25.92■■□□□ 1.74
SYNGR1-207ENST00000489206 EXOC6Q8TAG9 804 aa25.91■■□□□ 1.74
SYNGR1-207ENST00000489206 RICTORQ6R327 1708 aa25.9■■□□□ 1.74
SYNGR1-207ENST00000489206 SIGLEC1Q9BZZ2 1709 aa25.9■■□□□ 1.74
SYNGR1-207ENST00000489206 CENPJQ9HC77 1338 aaPredicted RBP25.9■■□□□ 1.74
SYNGR1-207ENST00000489206 C14orf93Q9H972 538 aaKnown RBP25.88■■□□□ 1.73
SYNGR1-207ENST00000489206 ZNF521Q96K83 1311 aa25.87■■□□□ 1.73
SYNGR1-207ENST00000489206 USP32Q8NFA0 1604 aa25.87■■□□□ 1.73
SYNGR1-207ENST00000489206 GGT6Q6P531 493 aa25.86■■□□□ 1.73
SYNGR1-207ENST00000489206 PLEKHH1Q9ULM0 1364 aa25.86■■□□□ 1.73
SYNGR1-207ENST00000489206 ARHGAP31Q2M1Z3 1444 aa25.85■■□□□ 1.73
SYNGR1-207ENST00000489206 CHGAP10645 457 aaKnown RBP25.84■■□□□ 1.73
SYNGR1-207ENST00000489206 ERICH6Q7L0X2 663 aa25.84■■□□□ 1.73
SYNGR1-207ENST00000489206 NGEFQ8N5V2 710 aa25.82■■□□□ 1.72
SYNGR1-207ENST00000489206 NEXMIFQ5QGS0 1516 aa25.82■■□□□ 1.72
SYNGR1-207ENST00000489206 ARHGEF28Q8N1W1 1705 aaKnown RBP25.81■■□□□ 1.72
SYNGR1-207ENST00000489206 GOLGA2Q08379 1002 aa25.81■■□□□ 1.72
SYNGR1-207ENST00000489206 CARD14Q9BXL6 1004 aa25.81■■□□□ 1.72
SYNGR1-207ENST00000489206 DUSP27Q5VZP5 1158 aa25.8■■□□□ 1.72
SYNGR1-207ENST00000489206 TCERG1O14776 1098 aaKnown RBP25.79■■□□□ 1.72
SYNGR1-207ENST00000489206 POLR3AO14802 1390 aaPredicted RBP25.79■■□□□ 1.72
SYNGR1-207ENST00000489206 PUS7Q96PZ0 661 aaKnown RBP25.78■■□□□ 1.72
SYNGR1-207ENST00000489206 TRAK1Q9UPV9 953 aa25.75■■□□□ 1.71
SYNGR1-207ENST00000489206 ZFYVE9O95405 1425 aa25.74■■□□□ 1.71
SYNGR1-207ENST00000489206 NSD3Q9BZ95 1437 aa25.74■■□□□ 1.71
SYNGR1-207ENST00000489206 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
SYNGR1-207ENST00000489206 SLFN5Q08AF3 891 aa25.74■■□□□ 1.71
SYNGR1-207ENST00000489206 VGFO15240 615 aaPredicted RBP25.73■■□□□ 1.71
SYNGR1-207ENST00000489206 RAPGEF3O95398 923 aa25.73■■□□□ 1.71
SYNGR1-207ENST00000489206 TRMT2AQ8IZ69 625 aaKnown RBP25.73■■□□□ 1.71
SYNGR1-207ENST00000489206 MS4A1P11836 297 aa25.73■■□□□ 1.71
SYNGR1-207ENST00000489206 CRBNQ96SW2 442 aa25.73■■□□□ 1.71
SYNGR1-207ENST00000489206 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
SYNGR1-207ENST00000489206 PLIN1O60240 522 aa25.72■■□□□ 1.71
SYNGR1-207ENST00000489206 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.72■■□□□ 1.71
SYNGR1-207ENST00000489206 ANP32AP39687 249 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms