RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ZFYVE9O95405 1425 aa22.97■■□□□ 1.27
CLDN11-208ENST00000488989 NRXN1Q9ULB1 1477 aa22.97■■□□□ 1.27
CLDN11-208ENST00000488989 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
CLDN11-208ENST00000488989 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
CLDN11-208ENST00000488989 STAG3Q9UJ98 1225 aa22.95■■□□□ 1.26
CLDN11-208ENST00000488989 NBPF8Q3BBV2 869 aa22.94■■□□□ 1.26
CLDN11-208ENST00000488989 KDM2AQ9Y2K7 1162 aa22.93■■□□□ 1.26
CLDN11-208ENST00000488989 KIAA1210Q9ULL0 1709 aa22.93■■□□□ 1.26
CLDN11-208ENST00000488989 TRPM1Q7Z4N2 1603 aa22.93■■□□□ 1.26
CLDN11-208ENST00000488989 SLIT1O75093 1534 aa22.92■■□□□ 1.26
CLDN11-208ENST00000488989 ARHGAP23Q9P227 1491 aa22.92■■□□□ 1.26
CLDN11-208ENST00000488989 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
CLDN11-208ENST00000488989 TMEM2Q9UHN6 1383 aa22.9■■□□□ 1.26
CLDN11-208ENST00000488989 RALGAPBQ86X10 1494 aa22.9■■□□□ 1.26
CLDN11-208ENST00000488989 ADGRF5Q8IZF2 1346 aa22.88■■□□□ 1.25
CLDN11-208ENST00000488989 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
CLDN11-208ENST00000488989 THEMISQ8N1K5 641 aaPredicted RBP22.88■■□□□ 1.25
CLDN11-208ENST00000488989 PIK3C2GO75747 1445 aa22.88■■□□□ 1.25
CLDN11-208ENST00000488989 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.86■■□□□ 1.25
CLDN11-208ENST00000488989 LAMC1P11047 1609 aa22.84■■□□□ 1.25
CLDN11-208ENST00000488989 HDGFP51858 240 aaKnown RBP22.84■■□□□ 1.25
CLDN11-208ENST00000488989 GPRASP1Q5JY77 1395 aa22.82■■□□□ 1.24
CLDN11-208ENST00000488989 SETBP1Q9Y6X0 1596 aa22.8■■□□□ 1.24
CLDN11-208ENST00000488989 NRXN3Q9Y4C0 1643 aa22.8■■□□□ 1.24
CLDN11-208ENST00000488989 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
CLDN11-208ENST00000488989 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
CLDN11-208ENST00000488989 C14orf93Q9H972 538 aaKnown RBP22.78■■□□□ 1.24
CLDN11-208ENST00000488989 LTKP29376 864 aa22.77■■□□□ 1.24
CLDN11-208ENST00000488989 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
CLDN11-208ENST00000488989 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
CLDN11-208ENST00000488989 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
CLDN11-208ENST00000488989 EID1Q9Y6B2 187 aa22.76■■□□□ 1.23
CLDN11-208ENST00000488989 IQGAP1P46940 1657 aa22.76■■□□□ 1.23
CLDN11-208ENST00000488989 POLR1AO95602 1720 aaPredicted RBP22.76■■□□□ 1.23
CLDN11-208ENST00000488989 ROCK2O75116 1388 aaKnown RBP22.76■■□□□ 1.23
CLDN11-208ENST00000488989 NBPF1Q3BBV0 1214 aa22.75■■□□□ 1.23
CLDN11-208ENST00000488989 CFAP70Q5T0N1 1121 aa22.75■■□□□ 1.23
CLDN11-208ENST00000488989 TXNDC2Q86VQ3 553 aa22.75■■□□□ 1.23
CLDN11-208ENST00000488989 ADGRB1O14514 1584 aa22.75■■□□□ 1.23
CLDN11-208ENST00000488989 LMTK3Q96Q04 1460 aa22.74■■□□□ 1.23
CLDN11-208ENST00000488989 ASXL1Q8IXJ9 1541 aa22.72■■□□□ 1.23
CLDN11-208ENST00000488989 MED14O60244 1454 aa22.71■■□□□ 1.23
CLDN11-208ENST00000488989 ANKLE2Q86XL3 938 aa22.7■■□□□ 1.22
CLDN11-208ENST00000488989 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
CLDN11-208ENST00000488989 ADAMTS13Q76LX8 1427 aa22.7■■□□□ 1.22
CLDN11-208ENST00000488989 DIP2AQ14689 1571 aa22.7■■□□□ 1.22
CLDN11-208ENST00000488989 USP47Q96K76 1375 aa22.66■■□□□ 1.22
CLDN11-208ENST00000488989 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
CLDN11-208ENST00000488989 TBX22Q9Y458 520 aa22.63■■□□□ 1.21
CLDN11-208ENST00000488989 KNDC1Q76NI1 1749 aa22.62■■□□□ 1.21
CLDN11-208ENST00000488989 HSPA5P11021 654 aaKnown RBP22.62■■□□□ 1.21
CLDN11-208ENST00000488989 NPHP4O75161 1426 aaPredicted RBP22.62■■□□□ 1.21
CLDN11-208ENST00000488989 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
CLDN11-208ENST00000488989 TMEM132EQ6IEE7 984 aa22.61■■□□□ 1.21
CLDN11-208ENST00000488989 ARHGEF28Q8N1W1 1705 aaKnown RBP22.61■■□□□ 1.21
CLDN11-208ENST00000488989 YTHDC2Q9H6S0 1430 aaKnown RBP22.6■■□□□ 1.21
CLDN11-208ENST00000488989 METP08581 1390 aa22.6■■□□□ 1.21
CLDN11-208ENST00000488989 LRPPRCP42704 1394 aaKnown RBP22.59■■□□□ 1.21
CLDN11-208ENST00000488989 NCKAP5LQ9HCH0 1330 aa22.58■■□□□ 1.21
CLDN11-208ENST00000488989 DLC1Q96QB1 1528 aa22.58■■□□□ 1.21
CLDN11-208ENST00000488989 HSPA2P54652 639 aa22.58■■□□□ 1.21
CLDN11-208ENST00000488989 PIK3R4Q99570 1358 aa22.58■■□□□ 1.21
CLDN11-208ENST00000488989 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
CLDN11-208ENST00000488989 BCANQ96GW7 911 aa22.57■■□□□ 1.2
CLDN11-208ENST00000488989 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
CLDN11-208ENST00000488989 EIF3AQ14152 1382 aaKnown RBP22.57■■□□□ 1.2
CLDN11-208ENST00000488989 CHD2O14647 1828 aaKnown RBP22.57■■□□□ 1.2
CLDN11-208ENST00000488989 TECPR2O15040 1411 aa22.57■■□□□ 1.2
CLDN11-208ENST00000488989 ABCC11Q96J66 1382 aa22.56■■□□□ 1.2
CLDN11-208ENST00000488989 SLC26A8Q96RN1 970 aa22.55■■□□□ 1.2
CLDN11-208ENST00000488989 CPS1P31327 1500 aa22.54■■□□□ 1.2
CLDN11-208ENST00000488989 ST20-MTHFSA0A0A6YYL1 179 aa22.54■■□□□ 1.2
CLDN11-208ENST00000488989 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
CLDN11-208ENST00000488989 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
CLDN11-208ENST00000488989 TRAK1Q9UPV9 953 aa22.52■■□□□ 1.2
CLDN11-208ENST00000488989 SBNO2Q9Y2G9 1366 aa22.51■■□□□ 1.19
CLDN11-208ENST00000488989 SIRT1Q96EB6 747 aa22.51■■□□□ 1.19
CLDN11-208ENST00000488989 QRICH2Q9H0J4 1663 aa22.51■■□□□ 1.19
CLDN11-208ENST00000488989 TESK2Q96S53 571 aa22.5■■□□□ 1.19
CLDN11-208ENST00000488989 HIRIP3Q9BW71 556 aaPredicted RBP22.5■■□□□ 1.19
CLDN11-208ENST00000488989 FAM135BQ49AJ0 1406 aa22.48■■□□□ 1.19
CLDN11-208ENST00000488989 NWD1Q149M9 1564 aa22.48■■□□□ 1.19
CLDN11-208ENST00000488989 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
CLDN11-208ENST00000488989 STK26Q9P289 416 aa22.47■■□□□ 1.19
CLDN11-208ENST00000488989 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
CLDN11-208ENST00000488989 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
CLDN11-208ENST00000488989 AMOTL2Q9Y2J4 779 aa22.44■■□□□ 1.18
CLDN11-208ENST00000488989 ROBO2Q9HCK4 1378 aa22.42■■□□□ 1.18
CLDN11-208ENST00000488989 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
CLDN11-208ENST00000488989 PRAM1Q96QH2 718 aa22.41■■□□□ 1.18
CLDN11-208ENST00000488989 KCNA6P17658 529 aa22.4■■□□□ 1.18
CLDN11-208ENST00000488989 PLEKHH1Q9ULM0 1364 aa22.39■■□□□ 1.18
CLDN11-208ENST00000488989 STRCP1A6NGW2 1772 aa22.39■■□□□ 1.17
CLDN11-208ENST00000488989 CCDC7Q96M83 1385 aa22.38■■□□□ 1.17
CLDN11-208ENST00000488989 WASHC2AQ641Q2 1341 aa22.38■■□□□ 1.17
CLDN11-208ENST00000488989 TMF1P82094 1093 aa22.38■■□□□ 1.17
CLDN11-208ENST00000488989 POGKQ9P215 609 aa22.38■■□□□ 1.17
CLDN11-208ENST00000488989 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
CLDN11-208ENST00000488989 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
CLDN11-208ENST00000488989 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms