RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
PHF11-215ENST00000488958 FAM98CQ17RN3 349 aaKnown RBP12.43□□□□□ -0.42
PHF11-215ENST00000488958 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
PHF11-215ENST00000488958 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
PHF11-215ENST00000488958 BHMG1C9JSJ3 638 aaPredicted RBP12.42□□□□□ -0.42
PHF11-215ENST00000488958 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
PHF11-215ENST00000488958 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
PHF11-215ENST00000488958 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
PHF11-215ENST00000488958 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
PHF11-215ENST00000488958 CD46P15529 392 aa12.4□□□□□ -0.42
PHF11-215ENST00000488958 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
PHF11-215ENST00000488958 RDH13Q8NBN7 331 aa12.39□□□□□ -0.43
PHF11-215ENST00000488958 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
PHF11-215ENST00000488958 GOPCQ9HD26 462 aa12.38□□□□□ -0.43
PHF11-215ENST00000488958 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
PHF11-215ENST00000488958 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
PHF11-215ENST00000488958 HRO43593 1189 aa12.37□□□□□ -0.43
PHF11-215ENST00000488958 SH3D19Q5HYK7 790 aa12.37□□□□□ -0.43
PHF11-215ENST00000488958 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
PHF11-215ENST00000488958 ZFRQ96KR1 1074 aaKnown RBP12.37□□□□□ -0.43
PHF11-215ENST00000488958 STAC3Q96MF2 364 aa12.37□□□□□ -0.43
PHF11-215ENST00000488958 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
PHF11-215ENST00000488958 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
PHF11-215ENST00000488958 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
PHF11-215ENST00000488958 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
PHF11-215ENST00000488958 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
PHF11-215ENST00000488958 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
PHF11-215ENST00000488958 POLR3EQ9NVU0 708 aa12.34□□□□□ -0.43
PHF11-215ENST00000488958 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
PHF11-215ENST00000488958 SLC10A3P09131 477 aa12.33□□□□□ -0.44
PHF11-215ENST00000488958 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
PHF11-215ENST00000488958 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
PHF11-215ENST00000488958 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
PHF11-215ENST00000488958 ATP1B4Q9UN42 357 aaPredicted RBP12.33□□□□□ -0.44
PHF11-215ENST00000488958 GOLGA8CPA6NN73 597 aa12.32□□□□□ -0.44
PHF11-215ENST00000488958 RNF40O75150 1001 aa12.32□□□□□ -0.44
PHF11-215ENST00000488958 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
PHF11-215ENST00000488958 KRTAP3-2Q9BYR7 98 aa12.31□□□□□ -0.44
PHF11-215ENST00000488958 GCGRP47871 477 aa12.3□□□□□ -0.44
PHF11-215ENST00000488958 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
PHF11-215ENST00000488958 LRCH3Q96II8 777 aa12.29□□□□□ -0.44
PHF11-215ENST00000488958 KDM4AO75164 1064 aa12.28□□□□□ -0.44
PHF11-215ENST00000488958 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
PHF11-215ENST00000488958 CLK2P49760 499 aaKnown RBP12.27□□□□□ -0.45
PHF11-215ENST00000488958 RIC3Q7Z5B4 369 aa12.26□□□□□ -0.45
PHF11-215ENST00000488958 ANKK1Q8NFD2 765 aa12.26□□□□□ -0.45
PHF11-215ENST00000488958 MOXD2PA6NHM9 499 aa12.24□□□□□ -0.45
PHF11-215ENST00000488958 CFHP08603 1231 aa12.24□□□□□ -0.45
PHF11-215ENST00000488958 NDUFV2P19404 249 aa12.24□□□□□ -0.45
PHF11-215ENST00000488958 CDAN1Q8IWY9 1227 aa12.24□□□□□ -0.45
PHF11-215ENST00000488958 LIMD1Q9UGP4 676 aa12.24□□□□□ -0.45
PHF11-215ENST00000488958 USP46P62068 366 aa12.23□□□□□ -0.45
PHF11-215ENST00000488958 WNT2BQ93097 391 aa12.23□□□□□ -0.45
PHF11-215ENST00000488958 SPTLC1O15269 473 aa12.22□□□□□ -0.45
PHF11-215ENST00000488958 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
PHF11-215ENST00000488958 TIMELESSQ9UNS1 1208 aa12.22□□□□□ -0.45
PHF11-215ENST00000488958 SOWAHBA6NEL2 793 aa12.21□□□□□ -0.45
PHF11-215ENST00000488958 BCAMP50895 628 aa12.21□□□□□ -0.45
PHF11-215ENST00000488958 HOXA2O43364 376 aa12.2□□□□□ -0.46
PHF11-215ENST00000488958 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
PHF11-215ENST00000488958 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
PHF11-215ENST00000488958 PPP4CP60510 307 aa12.19□□□□□ -0.46
PHF11-215ENST00000488958 CSPP1Q1MSJ5 1256 aa12.19□□□□□ -0.46
PHF11-215ENST00000488958 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
PHF11-215ENST00000488958 ERICH6Q7L0X2 663 aa12.19□□□□□ -0.46
PHF11-215ENST00000488958 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
PHF11-215ENST00000488958 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
PHF11-215ENST00000488958 FUT2Q10981 343 aa12.18□□□□□ -0.46
PHF11-215ENST00000488958 GJA5P36382 358 aa12.17□□□□□ -0.46
PHF11-215ENST00000488958 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
PHF11-215ENST00000488958 TUSC1Q2TAM9 212 aa12.16□□□□□ -0.46
PHF11-215ENST00000488958 GRIPAP1Q4V328 841 aa12.16□□□□□ -0.46
PHF11-215ENST00000488958 HLA-CQ95604 372 aa12.16□□□□□ -0.46
PHF11-215ENST00000488958 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
PHF11-215ENST00000488958 FDX1P10109 184 aa12.15□□□□□ -0.46
PHF11-215ENST00000488958 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
PHF11-215ENST00000488958 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
PHF11-215ENST00000488958 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
PHF11-215ENST00000488958 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
PHF11-215ENST00000488958 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
PHF11-215ENST00000488958 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
PHF11-215ENST00000488958 QPCTQ16769 361 aa12.12□□□□□ -0.47
PHF11-215ENST00000488958 PCDHGC3Q9UN70 934 aa12.12□□□□□ -0.47
PHF11-215ENST00000488958 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
PHF11-215ENST00000488958 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
PHF11-215ENST00000488958 NUTM2DQ5VT03 806 aaPredicted RBP12.11□□□□□ -0.47
PHF11-215ENST00000488958 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
PHF11-215ENST00000488958 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
PHF11-215ENST00000488958 LILRB3O75022 631 aa12.11□□□□□ -0.47
PHF11-215ENST00000488958 RFC5P40937 340 aa12.11□□□□□ -0.47
PHF11-215ENST00000488958 APLP1P51693 650 aa12.11□□□□□ -0.47
PHF11-215ENST00000488958 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
PHF11-215ENST00000488958 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
PHF11-215ENST00000488958 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
PHF11-215ENST00000488958 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
PHF11-215ENST00000488958 PRPF38BQ5VTL8 546 aaKnown RBP12.1□□□□□ -0.47
PHF11-215ENST00000488958 HRCP23327 699 aa12.09□□□□□ -0.47
PHF11-215ENST00000488958 FLIIQ13045 1269 aa12.09□□□□□ -0.47
PHF11-215ENST00000488958 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
PHF11-215ENST00000488958 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms