RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	KCNA6	P17658	529 aa		19.86	■□□□□ 0.77
WDR46-238	ENST00000488944	BCAN	Q96GW7	911 aa		19.86	■□□□□ 0.77
WDR46-238	ENST00000488944	TMEM131L	A2VDJ0	1609 aa		19.86	■□□□□ 0.77
WDR46-238	ENST00000488944	ITGAE	P38570	1179 aa		19.85	■□□□□ 0.77
WDR46-238	ENST00000488944	ZFYVE9	O95405	1425 aa		19.85	■□□□□ 0.77
WDR46-238	ENST00000488944	NWD1	Q149M9	1564 aa		19.84	■□□□□ 0.77
WDR46-238	ENST00000488944	RIMS2	Q9UQ26	1411 aa		19.84	■□□□□ 0.77
WDR46-238	ENST00000488944	IQGAP3	Q86VI3	1631 aa		19.84	■□□□□ 0.77
WDR46-238	ENST00000488944	ROCK1	Q13464	1354 aa		19.83	■□□□□ 0.77
WDR46-238	ENST00000488944	PROSER2	Q86WR7	435 aa	Predicted RBP	19.83	■□□□□ 0.77
WDR46-238	ENST00000488944	PHF23	Q9BUL5	403 aa	Predicted RBP	19.83	■□□□□ 0.77
WDR46-238	ENST00000488944	CHGA	P10645	457 aa	Known RBP	19.82	■□□□□ 0.76
WDR46-238	ENST00000488944	NKTR	P30414	1462 aa	Known RBP	19.81	■□□□□ 0.76
WDR46-238	ENST00000488944	PPP1R15A	O75807	674 aa	Predicted RBP	19.81	■□□□□ 0.76
WDR46-238	ENST00000488944	PLEKHG1	Q9ULL1	1385 aa		19.81	■□□□□ 0.76
WDR46-238	ENST00000488944	CHD2	O14647	1828 aa	Known RBP	19.8	■□□□□ 0.76
WDR46-238	ENST00000488944	ROBO1	Q9Y6N7	1651 aa		19.79	■□□□□ 0.76
WDR46-238	ENST00000488944	FAM135B	Q49AJ0	1406 aa		19.78	■□□□□ 0.76
WDR46-238	ENST00000488944	NUTM2D	Q5VT03	806 aa	Predicted RBP	19.78	■□□□□ 0.76
WDR46-238	ENST00000488944	NUP155	O75694	1391 aa		19.78	■□□□□ 0.76
WDR46-238	ENST00000488944	HDGF	P51858	240 aa	Known RBP	19.74	■□□□□ 0.75
WDR46-238	ENST00000488944	MSH6	P52701	1360 aa		19.73	■□□□□ 0.75
WDR46-238	ENST00000488944	ADAMTS13	Q76LX8	1427 aa		19.72	■□□□□ 0.75
WDR46-238	ENST00000488944	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	19.72	■□□□□ 0.75
WDR46-238	ENST00000488944	SPHKAP	Q2M3C7	1700 aa		19.71	■□□□□ 0.75
WDR46-238	ENST00000488944	TBX22	Q9Y458	520 aa		19.71	■□□□□ 0.75
WDR46-238	ENST00000488944	DIP2A	Q14689	1571 aa		19.69	■□□□□ 0.74
WDR46-238	ENST00000488944	RGS17	Q9UGC6	210 aa	Predicted RBP	19.68	■□□□□ 0.74
WDR46-238	ENST00000488944	PHLPP1	O60346	1717 aa		19.68	■□□□□ 0.74
WDR46-238	ENST00000488944	SLAIN2	Q9P270	581 aa		19.67	■□□□□ 0.74
WDR46-238	ENST00000488944	C14orf37	Q86TY3	774 aa		19.65	■□□□□ 0.74
WDR46-238	ENST00000488944	TRPM2	O94759	1503 aa		19.65	■□□□□ 0.74
WDR46-238	ENST00000488944	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	19.65	■□□□□ 0.74
WDR46-238	ENST00000488944	NRXN3	Q9Y4C0	1643 aa		19.63	■□□□□ 0.73
WDR46-238	ENST00000488944	PTPRU	Q92729	1446 aa		19.63	■□□□□ 0.73
WDR46-238	ENST00000488944	RRBP1	Q9P2E9	1410 aa	Known RBP	19.63	■□□□□ 0.73
WDR46-238	ENST00000488944	PIK3R4	Q99570	1358 aa		19.63	■□□□□ 0.73
WDR46-238	ENST00000488944	CLTCL1	P53675	1640 aa		19.62	■□□□□ 0.73
WDR46-238	ENST00000488944	NCOA3	Q9Y6Q9	1424 aa		19.61	■□□□□ 0.73
WDR46-238	ENST00000488944	AMOTL2	Q9Y2J4	779 aa		19.61	■□□□□ 0.73
WDR46-238	ENST00000488944	COL16A1	Q07092	1604 aa	Predicted RBP	19.61	■□□□□ 0.73
WDR46-238	ENST00000488944	ZNF326	Q5BKZ1	582 aa	Known RBP	19.6	■□□□□ 0.73
WDR46-238	ENST00000488944	NAIP	Q13075	1403 aa		19.59	■□□□□ 0.73
WDR46-238	ENST00000488944	SETBP1	Q9Y6X0	1596 aa		19.59	■□□□□ 0.73
WDR46-238	ENST00000488944	XRN1	Q8IZH2	1706 aa	Known RBP	19.59	■□□□□ 0.73
WDR46-238	ENST00000488944	POTEA	Q6S8J7	498 aa		19.57	■□□□□ 0.72
WDR46-238	ENST00000488944	C19orf44	Q9H6X5	657 aa		19.57	■□□□□ 0.72
WDR46-238	ENST00000488944	KIF1B	O60333	1816 aa		19.57	■□□□□ 0.72
WDR46-238	ENST00000488944	JCAD	Q9P266	1359 aa		19.57	■□□□□ 0.72
WDR46-238	ENST00000488944	ATF3	P18847	181 aa		19.56	■□□□□ 0.72
WDR46-238	ENST00000488944	CADPS2	Q86UW7	1296 aa		19.56	■□□□□ 0.72
WDR46-238	ENST00000488944	NEXMIF	Q5QGS0	1516 aa		19.56	■□□□□ 0.72
WDR46-238	ENST00000488944	MET	P08581	1390 aa		19.54	■□□□□ 0.72
WDR46-238	ENST00000488944	AHDC1	Q5TGY3	1603 aa	Predicted RBP	19.54	■□□□□ 0.72
WDR46-238	ENST00000488944	TRIM52	Q96A61	297 aa		19.52	■□□□□ 0.72
WDR46-238	ENST00000488944	LRP6	O75581	1613 aa		19.51	■□□□□ 0.71
WDR46-238	ENST00000488944	HFM1	A2PYH4	1435 aa		19.5	■□□□□ 0.71
WDR46-238	ENST00000488944	BRINP3	Q76B58	766 aa		19.49	■□□□□ 0.71
WDR46-238	ENST00000488944	DCC	P43146	1447 aa		19.49	■□□□□ 0.71
WDR46-238	ENST00000488944	SHPRH	Q149N8	1683 aa		19.49	■□□□□ 0.71
WDR46-238	ENST00000488944	NALCN	Q8IZF0	1738 aa		19.48	■□□□□ 0.71
WDR46-238	ENST00000488944	SETD1A	O15047	1707 aa	Known RBP	19.48	■□□□□ 0.71
WDR46-238	ENST00000488944	ASXL1	Q8IXJ9	1541 aa		19.47	■□□□□ 0.71
WDR46-238	ENST00000488944	MST1R	Q04912	1400 aa		19.47	■□□□□ 0.71
WDR46-238	ENST00000488944	ADGRL3	Q9HAR2	1447 aa		19.45	■□□□□ 0.7
WDR46-238	ENST00000488944	SLC4A1AP	Q9BWU0	796 aa	Known RBP	19.45	■□□□□ 0.7
WDR46-238	ENST00000488944	SPATA31A6	Q5VVP1	1343 aa		19.45	■□□□□ 0.7
WDR46-238	ENST00000488944	NHSL1	Q5SYE7	1610 aa		19.44	■□□□□ 0.7
WDR46-238	ENST00000488944	MEX3C	Q5U5Q3	659 aa	Known RBP	19.44	■□□□□ 0.7
WDR46-238	ENST00000488944	PPL	O60437	1756 aa		19.42	■□□□□ 0.7
WDR46-238	ENST00000488944	FOXD1	Q16676	465 aa		19.41	■□□□□ 0.7
WDR46-238	ENST00000488944	NUTM2B	A6NNL0	878 aa	Predicted RBP	19.4	■□□□□ 0.7
WDR46-238	ENST00000488944	NUTM2E	B1AL46	878 aa	Predicted RBP	19.4	■□□□□ 0.7
WDR46-238	ENST00000488944	VGF	O15240	615 aa	Predicted RBP	19.4	■□□□□ 0.7
WDR46-238	ENST00000488944	NUTM2A	Q8IVF1	878 aa	Predicted RBP	19.4	■□□□□ 0.7
WDR46-238	ENST00000488944	DDX17	Q92841	729 aa	Known RBP	19.4	■□□□□ 0.7
WDR46-238	ENST00000488944	SETD5	Q9C0A6	1442 aa		19.38	■□□□□ 0.69
WDR46-238	ENST00000488944	ROBO2	Q9HCK4	1378 aa		19.38	■□□□□ 0.69
WDR46-238	ENST00000488944	PTCH1	Q13635	1447 aa		19.37	■□□□□ 0.69
WDR46-238	ENST00000488944	RPGRIP1L	Q68CZ1	1315 aa		19.36	■□□□□ 0.69
WDR46-238	ENST00000488944	ZNF772	Q68DY9	489 aa	Predicted RBP	19.35	■□□□□ 0.69
WDR46-238	ENST00000488944	C1orf167	Q5SNV9	1468 aa		19.35	■□□□□ 0.69
WDR46-238	ENST00000488944	LRRC59	Q96AG4	307 aa	Known RBP	19.33	■□□□□ 0.68
WDR46-238	ENST00000488944	PNPLA6	Q8IY17	1366 aa		19.32	■□□□□ 0.68
WDR46-238	ENST00000488944	CCDC144A	A2RUR9	1427 aa		19.32	■□□□□ 0.68
WDR46-238	ENST00000488944	PRAG1	Q86YV5	1406 aa		19.32	■□□□□ 0.68
WDR46-238	ENST00000488944	ORAI2	Q96SN7	254 aa		19.31	■□□□□ 0.68
WDR46-238	ENST00000488944	IFT172	Q9UG01	1749 aa		19.31	■□□□□ 0.68
WDR46-238	ENST00000488944	AFF2	P51816	1311 aa		19.3	■□□□□ 0.68
WDR46-238	ENST00000488944	ADGRF5	Q8IZF2	1346 aa		19.3	■□□□□ 0.68
WDR46-238	ENST00000488944	RGL3	Q3MIN7	710 aa		19.3	■□□□□ 0.68
WDR46-238	ENST00000488944	MPHOSPH9	Q99550	1183 aa		19.29	■□□□□ 0.68
WDR46-238	ENST00000488944	LAMC1	P11047	1609 aa		19.29	■□□□□ 0.68
WDR46-238	ENST00000488944	SPATA31E1	Q6ZUB1	1445 aa		19.28	■□□□□ 0.68
WDR46-238	ENST00000488944	C8orf37	Q96NL8	207 aa		19.27	■□□□□ 0.68
WDR46-238	ENST00000488944	RXRB	P28702	533 aa		19.26	■□□□□ 0.67
WDR46-238	ENST00000488944	CDC42BPG	Q6DT37	1551 aa		19.25	■□□□□ 0.67
WDR46-238	ENST00000488944	STK26	Q9P289	416 aa		19.25	■□□□□ 0.67
WDR46-238	ENST00000488944	SOS2	Q07890	1332 aa	Predicted RBP	19.25	■□□□□ 0.67
WDR46-238	ENST00000488944	ADAMTS2	O95450	1211 aa		19.23	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms