RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 ADAMTS12P58397 1594 aa8.73□□□□□ -1.01
SF3A3-207ENST00000488934 TRIM6-TRIM34B2RNG4 842 aa8.72□□□□□ -1.01
SF3A3-207ENST00000488934 TULP1O00294 542 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-207ENST00000488934 MLLT3P42568 568 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-207ENST00000488934 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
SF3A3-207ENST00000488934 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
SF3A3-207ENST00000488934 SEMA3EO15041 775 aa8.71□□□□□ -1.02
SF3A3-207ENST00000488934 FHAD1B1AJZ9 1412 aa8.71□□□□□ -1.02
SF3A3-207ENST00000488934 KIF27Q86VH2 1401 aa8.71□□□□□ -1.02
SF3A3-207ENST00000488934 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 RIMBP3CA6NJZ7 1639 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 RIMBP3BA6NNM3 1639 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 RIMBP3Q9UFD9 1639 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 CUL7Q14999 1698 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-207ENST00000488934 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 RBM27Q9P2N5 1060 aaKnown RBP8.7□□□□□ -1.02
SF3A3-207ENST00000488934 GRIN2AQ12879 1464 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 ARHGEF11O15085 1522 aa8.7□□□□□ -1.02
SF3A3-207ENST00000488934 PRSS12P56730 875 aa8.69□□□□□ -1.02
SF3A3-207ENST00000488934 KIAA1468Q9P260 1216 aa8.69□□□□□ -1.02
SF3A3-207ENST00000488934 TESPA1A2RU30 521 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-207ENST00000488934 NBPF26B4DH59 902 aa8.68□□□□□ -1.02
SF3A3-207ENST00000488934 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
SF3A3-207ENST00000488934 CDCA7LQ96GN5 454 aa8.68□□□□□ -1.02
SF3A3-207ENST00000488934 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
SF3A3-207ENST00000488934 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
SF3A3-207ENST00000488934 PRIM1P49642 420 aaKnown RBP8.67□□□□□ -1.02
SF3A3-207ENST00000488934 CDHR5Q9HBB8 845 aa8.67□□□□□ -1.02
SF3A3-207ENST00000488934 ANKK1Q8NFD2 765 aa8.66□□□□□ -1.02
SF3A3-207ENST00000488934 WNT2BQ93097 391 aa8.66□□□□□ -1.02
SF3A3-207ENST00000488934 NUP160Q12769 1436 aa8.65□□□□□ -1.02
SF3A3-207ENST00000488934 FAM98CQ17RN3 349 aaKnown RBP8.65□□□□□ -1.02
SF3A3-207ENST00000488934 CEP170Q5SW79 1584 aa8.65□□□□□ -1.03
SF3A3-207ENST00000488934 TSKSQ9UJT2 592 aa8.64□□□□□ -1.03
SF3A3-207ENST00000488934 FCHSD2O94868 740 aa8.63□□□□□ -1.03
SF3A3-207ENST00000488934 SHROOM2Q13796 1616 aa8.62□□□□□ -1.03
SF3A3-207ENST00000488934 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
SF3A3-207ENST00000488934 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
SF3A3-207ENST00000488934 ZFRQ96KR1 1074 aaKnown RBP8.62□□□□□ -1.03
SF3A3-207ENST00000488934 SEPT9Q9UHD8 586 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-207ENST00000488934 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
SF3A3-207ENST00000488934 RUSC2Q8N2Y8 1516 aa8.61□□□□□ -1.03
SF3A3-207ENST00000488934 PTGDRQ13258 359 aa8.61□□□□□ -1.03
SF3A3-207ENST00000488934 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
SF3A3-207ENST00000488934 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
SF3A3-207ENST00000488934 IGF1RP08069 1367 aa8.61□□□□□ -1.03
SF3A3-207ENST00000488934 ARAP1Q96P48 1450 aa8.6□□□□□ -1.03
SF3A3-207ENST00000488934 TATDN2Q93075 761 aa8.6□□□□□ -1.03
SF3A3-207ENST00000488934 SLC4A3P48751 1232 aa8.59□□□□□ -1.03
SF3A3-207ENST00000488934 HIC1Q14526 733 aa8.59□□□□□ -1.03
SF3A3-207ENST00000488934 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
SF3A3-207ENST00000488934 PTPN5P54829 565 aa8.58□□□□□ -1.04
SF3A3-207ENST00000488934 NUDT18Q6ZVK8 323 aa8.58□□□□□ -1.04
SF3A3-207ENST00000488934 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-207ENST00000488934 CARMIL1Q5VZK9 1371 aa8.58□□□□□ -1.04
SF3A3-207ENST00000488934 SOWAHBA6NEL2 793 aa8.57□□□□□ -1.04
SF3A3-207ENST00000488934 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
SF3A3-207ENST00000488934 NYAP1Q6ZVC0 841 aa8.57□□□□□ -1.04
SF3A3-207ENST00000488934 GPIHBP1Q8IV16 184 aa8.57□□□□□ -1.04
SF3A3-207ENST00000488934 TTC13Q8NBP0 860 aa8.57□□□□□ -1.04
SF3A3-207ENST00000488934 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
SF3A3-207ENST00000488934 CYB5RLQ6IPT4 315 aa8.56□□□□□ -1.04
SF3A3-207ENST00000488934 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
SF3A3-207ENST00000488934 NECTIN2Q92692 538 aa8.56□□□□□ -1.04
SF3A3-207ENST00000488934 FAM198AQ9UFP1 575 aa8.56□□□□□ -1.04
SF3A3-207ENST00000488934 RAPGEF2Q9Y4G8 1499 aa8.56□□□□□ -1.04
SF3A3-207ENST00000488934 EEA1Q15075 1411 aa8.55□□□□□ -1.04
SF3A3-207ENST00000488934 CTTNBP2Q8WZ74 1663 aa8.54□□□□□ -1.04
SF3A3-207ENST00000488934 IQGAP2Q13576 1575 aa8.54□□□□□ -1.04
SF3A3-207ENST00000488934 SMAPO00193 183 aa8.54□□□□□ -1.04
SF3A3-207ENST00000488934 PRG4Q92954 1404 aaPredicted RBP8.54□□□□□ -1.04
SF3A3-207ENST00000488934 GNPATO15228 680 aa8.53□□□□□ -1.04
SF3A3-207ENST00000488934 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
SF3A3-207ENST00000488934 BCAMP50895 628 aa8.53□□□□□ -1.04
SF3A3-207ENST00000488934 TSR3Q9UJK0 312 aaKnown RBP8.53□□□□□ -1.04
SF3A3-207ENST00000488934 OATP04181 439 aa8.52□□□□□ -1.05
SF3A3-207ENST00000488934 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
SF3A3-207ENST00000488934 ERCC6L2Q5T890 1561 aa8.52□□□□□ -1.05
SF3A3-207ENST00000488934 DNAJB2P25686 324 aa8.51□□□□□ -1.05
SF3A3-207ENST00000488934 PPP4CP60510 307 aa8.51□□□□□ -1.05
SF3A3-207ENST00000488934 SLF2Q8IX21 1173 aa8.51□□□□□ -1.05
SF3A3-207ENST00000488934 HPS5Q9UPZ3 1129 aa8.51□□□□□ -1.05
SF3A3-207ENST00000488934 CARMIL2Q6F5E8 1435 aa8.51□□□□□ -1.05
SF3A3-207ENST00000488934 RNF40O75150 1001 aa8.5□□□□□ -1.05
SF3A3-207ENST00000488934 EYA1Q99502 592 aa8.5□□□□□ -1.05
SF3A3-207ENST00000488934 ADGRG1Q9Y653 693 aa8.5□□□□□ -1.05
SF3A3-207ENST00000488934 PRXQ9BXM0 1461 aa8.5□□□□□ -1.05
SF3A3-207ENST00000488934 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
SF3A3-207ENST00000488934 UGGT2Q9NYU1 1516 aa8.48□□□□□ -1.05
SF3A3-207ENST00000488934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.47□□□□□ -1.05
SF3A3-207ENST00000488934 C3orf80F5H4A9 247 aa8.47□□□□□ -1.05
SF3A3-207ENST00000488934 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
SF3A3-207ENST00000488934 GOLGA3Q08378 1498 aa8.46□□□□□ -1.05
SF3A3-207ENST00000488934 GPR37O15354 613 aa8.46□□□□□ -1.06
SF3A3-207ENST00000488934 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
SF3A3-207ENST00000488934 PRR14Q9BWN1 585 aa8.46□□□□□ -1.06
SF3A3-207ENST00000488934 KIAA0556O60303 1618 aa8.46□□□□□ -1.06
SF3A3-207ENST00000488934 TNIKQ9UKE5 1360 aa8.46□□□□□ -1.06
SF3A3-207ENST00000488934 KIF21BO75037 1637 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms