RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 NPHP4O75161 1426 aaPredicted RBP9.81□□□□□ -0.84
PTPRD-212ENST00000488774 SLC4A1APQ9BWU0 796 aaKnown RBP9.8□□□□□ -0.84
PTPRD-212ENST00000488774 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
PTPRD-212ENST00000488774 RIMS2Q9UQ26 1411 aa9.79□□□□□ -0.84
PTPRD-212ENST00000488774 SPATA31E1Q6ZUB1 1445 aa9.77□□□□□ -0.85
PTPRD-212ENST00000488774 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
PTPRD-212ENST00000488774 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
PTPRD-212ENST00000488774 PIAS4Q8N2W9 510 aaPredicted RBP9.77□□□□□ -0.85
PTPRD-212ENST00000488774 SLC52A1Q9NWF4 448 aa9.77□□□□□ -0.85
PTPRD-212ENST00000488774 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
PTPRD-212ENST00000488774 ADRA2BP18089 450 aa9.76□□□□□ -0.85
PTPRD-212ENST00000488774 ANKLE2Q86XL3 938 aa9.76□□□□□ -0.85
PTPRD-212ENST00000488774 ANKRD30BQ9BXX2 1392 aa9.75□□□□□ -0.85
PTPRD-212ENST00000488774 NWD1Q149M9 1564 aa9.75□□□□□ -0.85
PTPRD-212ENST00000488774 PTPRUQ92729 1446 aa9.75□□□□□ -0.85
PTPRD-212ENST00000488774 SLC26A8Q96RN1 970 aa9.75□□□□□ -0.85
PTPRD-212ENST00000488774 ASXL1Q8IXJ9 1541 aa9.75□□□□□ -0.85
PTPRD-212ENST00000488774 XRN1Q8IZH2 1706 aaKnown RBP9.74□□□□□ -0.85
PTPRD-212ENST00000488774 LRRC7Q96NW7 1537 aa9.74□□□□□ -0.85
PTPRD-212ENST00000488774 MSH5O43196 834 aa9.74□□□□□ -0.85
PTPRD-212ENST00000488774 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
PTPRD-212ENST00000488774 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
PTPRD-212ENST00000488774 SETBP1Q9Y6X0 1596 aa9.74□□□□□ -0.85
PTPRD-212ENST00000488774 ILDR1Q86SU0 546 aaPredicted RBP9.73□□□□□ -0.85
PTPRD-212ENST00000488774 CERKQ8TCT0 537 aa9.73□□□□□ -0.85
PTPRD-212ENST00000488774 PLEKHG1Q9ULL1 1385 aa9.73□□□□□ -0.85
PTPRD-212ENST00000488774 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
PTPRD-212ENST00000488774 METP08581 1390 aa9.71□□□□□ -0.86
PTPRD-212ENST00000488774 NALCNQ8IZF0 1738 aa9.7□□□□□ -0.86
PTPRD-212ENST00000488774 DMRT2Q9Y5R5 561 aa9.7□□□□□ -0.86
PTPRD-212ENST00000488774 ADGRF5Q8IZF2 1346 aa9.7□□□□□ -0.86
PTPRD-212ENST00000488774 CCDC144AA2RUR9 1427 aa9.69□□□□□ -0.86
PTPRD-212ENST00000488774 HRCP23327 699 aa9.69□□□□□ -0.86
PTPRD-212ENST00000488774 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-212ENST00000488774 DIP2AQ14689 1571 aa9.69□□□□□ -0.86
PTPRD-212ENST00000488774 RGL3Q3MIN7 710 aa9.69□□□□□ -0.86
PTPRD-212ENST00000488774 DHX57Q6P158 1386 aaKnown RBP9.69□□□□□ -0.86
PTPRD-212ENST00000488774 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-212ENST00000488774 CPS1P31327 1500 aa9.68□□□□□ -0.86
PTPRD-212ENST00000488774 ZNF326Q5BKZ1 582 aaKnown RBP9.68□□□□□ -0.86
PTPRD-212ENST00000488774 NRXN1Q9ULB1 1477 aa9.67□□□□□ -0.86
PTPRD-212ENST00000488774 SIN3AQ96ST3 1273 aa9.67□□□□□ -0.86
PTPRD-212ENST00000488774 EID1Q9Y6B2 187 aa9.67□□□□□ -0.86
PTPRD-212ENST00000488774 RGPD8O14715 1765 aaPredicted RBP9.67□□□□□ -0.86
PTPRD-212ENST00000488774 PIK3C2GO75747 1445 aa9.65□□□□□ -0.86
PTPRD-212ENST00000488774 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.86
PTPRD-212ENST00000488774 KCNA6P17658 529 aa9.65□□□□□ -0.86
PTPRD-212ENST00000488774 PPP1R15AO75807 674 aaPredicted RBP9.64□□□□□ -0.87
PTPRD-212ENST00000488774 TBX22Q9Y458 520 aa9.64□□□□□ -0.87
PTPRD-212ENST00000488774 IQSEC2Q5JU85 1478 aa9.64□□□□□ -0.87
PTPRD-212ENST00000488774 TMEM94Q12767 1356 aa9.63□□□□□ -0.87
PTPRD-212ENST00000488774 ADGRB1O14514 1584 aa9.63□□□□□ -0.87
PTPRD-212ENST00000488774 FBXO41Q8TF61 875 aa9.63□□□□□ -0.87
PTPRD-212ENST00000488774 NKTRP30414 1462 aaKnown RBP9.63□□□□□ -0.87
PTPRD-212ENST00000488774 MYOM2P54296 1465 aa9.63□□□□□ -0.87
PTPRD-212ENST00000488774 ROBO2Q9HCK4 1378 aa9.63□□□□□ -0.87
PTPRD-212ENST00000488774 ARHGEF28Q8N1W1 1705 aaKnown RBP9.62□□□□□ -0.87
PTPRD-212ENST00000488774 ROBO1Q9Y6N7 1651 aa9.62□□□□□ -0.87
PTPRD-212ENST00000488774 TMEM132EQ6IEE7 984 aa9.62□□□□□ -0.87
PTPRD-212ENST00000488774 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPRD-212ENST00000488774 BCANQ96GW7 911 aa9.62□□□□□ -0.87
PTPRD-212ENST00000488774 PCGF6Q9BYE7 350 aa9.62□□□□□ -0.87
PTPRD-212ENST00000488774 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
PTPRD-212ENST00000488774 AMOTL2Q9Y2J4 779 aa9.61□□□□□ -0.87
PTPRD-212ENST00000488774 LAMC1P11047 1609 aa9.6□□□□□ -0.87
PTPRD-212ENST00000488774 TRPM1Q7Z4N2 1603 aa9.6□□□□□ -0.87
PTPRD-212ENST00000488774 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
PTPRD-212ENST00000488774 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
PTPRD-212ENST00000488774 KIAA1210Q9ULL0 1709 aa9.59□□□□□ -0.87
PTPRD-212ENST00000488774 RPGRIP1LQ68CZ1 1315 aa9.59□□□□□ -0.87
PTPRD-212ENST00000488774 UBAP1LF5GYI3 381 aa9.59□□□□□ -0.87
PTPRD-212ENST00000488774 USP32Q8NFA0 1604 aa9.58□□□□□ -0.88
PTPRD-212ENST00000488774 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
PTPRD-212ENST00000488774 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
PTPRD-212ENST00000488774 PIK3R4Q99570 1358 aa9.58□□□□□ -0.88
PTPRD-212ENST00000488774 PRAG1Q86YV5 1406 aa9.57□□□□□ -0.88
PTPRD-212ENST00000488774 FMN2Q9NZ56 1722 aa9.57□□□□□ -0.88
PTPRD-212ENST00000488774 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
PTPRD-212ENST00000488774 PIP4K2BP78356 416 aa9.57□□□□□ -0.88
PTPRD-212ENST00000488774 NEUROD1Q13562 356 aa9.57□□□□□ -0.88
PTPRD-212ENST00000488774 WAPLQ7Z5K2 1190 aa9.57□□□□□ -0.88
PTPRD-212ENST00000488774 L3MBTL2Q969R5 705 aa9.57□□□□□ -0.88
PTPRD-212ENST00000488774 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
PTPRD-212ENST00000488774 NBPF1Q3BBV0 1214 aa9.56□□□□□ -0.88
PTPRD-212ENST00000488774 NBPF8Q3BBV2 869 aa9.56□□□□□ -0.88
PTPRD-212ENST00000488774 C14orf93Q9H972 538 aaKnown RBP9.56□□□□□ -0.88
PTPRD-212ENST00000488774 STK26Q9P289 416 aa9.56□□□□□ -0.88
PTPRD-212ENST00000488774 PHLPP1O60346 1717 aa9.56□□□□□ -0.88
PTPRD-212ENST00000488774 NHSL1Q5SYE7 1610 aa9.56□□□□□ -0.88
PTPRD-212ENST00000488774 TECPR2O15040 1411 aa9.56□□□□□ -0.88
PTPRD-212ENST00000488774 PTCH1Q13635 1447 aa9.56□□□□□ -0.88
PTPRD-212ENST00000488774 HDGFP51858 240 aaKnown RBP9.55□□□□□ -0.88
PTPRD-212ENST00000488774 LRPPRCP42704 1394 aaKnown RBP9.54□□□□□ -0.88
PTPRD-212ENST00000488774 COL16A1Q07092 1604 aaPredicted RBP9.54□□□□□ -0.88
PTPRD-212ENST00000488774 HSPA1LP34931 641 aa9.54□□□□□ -0.88
PTPRD-212ENST00000488774 MST1RQ04912 1400 aa9.54□□□□□ -0.88
PTPRD-212ENST00000488774 ADGRL3Q9HAR2 1447 aa9.54□□□□□ -0.88
PTPRD-212ENST00000488774 ACIN1Q9UKV3 1341 aaKnown RBP9.54□□□□□ -0.88
PTPRD-212ENST00000488774 QRICH2Q9H0J4 1663 aa9.53□□□□□ -0.88
PTPRD-212ENST00000488774 DDX17Q92841 729 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms