RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
SNU13-208ENST00000488571 ANKRD30AQ9BXX3 1397 aa17.82■□□□□ 0.44
SNU13-208ENST00000488571 IDI1Q13907 227 aa17.82■□□□□ 0.44
SNU13-208ENST00000488571 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
SNU13-208ENST00000488571 TET3O43151 1660 aa17.82■□□□□ 0.44
SNU13-208ENST00000488571 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
SNU13-208ENST00000488571 NOS1P29475 1434 aa17.81■□□□□ 0.44
SNU13-208ENST00000488571 APLP2Q06481 763 aa17.8■□□□□ 0.44
SNU13-208ENST00000488571 ADGRB3O60242 1522 aa17.79■□□□□ 0.44
SNU13-208ENST00000488571 ADGRL2O95490 1459 aa17.78■□□□□ 0.44
SNU13-208ENST00000488571 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
SNU13-208ENST00000488571 TMEM94Q12767 1356 aa17.78■□□□□ 0.44
SNU13-208ENST00000488571 DSG3P32926 999 aa17.77■□□□□ 0.44
SNU13-208ENST00000488571 FAM135BQ49AJ0 1406 aa17.77■□□□□ 0.44
SNU13-208ENST00000488571 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
SNU13-208ENST00000488571 KCNA6P17658 529 aa17.75■□□□□ 0.43
SNU13-208ENST00000488571 SLC26A8Q96RN1 970 aa17.75■□□□□ 0.43
SNU13-208ENST00000488571 RGS17Q9UGC6 210 aaPredicted RBP17.75■□□□□ 0.43
SNU13-208ENST00000488571 ROBO1Q9Y6N7 1651 aa17.74■□□□□ 0.43
SNU13-208ENST00000488571 NKTRP30414 1462 aaKnown RBP17.72■□□□□ 0.43
SNU13-208ENST00000488571 RPRD2Q5VT52 1461 aaKnown RBP17.72■□□□□ 0.43
SNU13-208ENST00000488571 SLC52A1Q9NWF4 448 aa17.72■□□□□ 0.43
SNU13-208ENST00000488571 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
SNU13-208ENST00000488571 RBM33Q96EV2 1170 aaKnown RBP17.71■□□□□ 0.43
SNU13-208ENST00000488571 ZFYVE9O95405 1425 aa17.71■□□□□ 0.43
SNU13-208ENST00000488571 ANKRD50Q9ULJ7 1429 aa17.71■□□□□ 0.43
SNU13-208ENST00000488571 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
SNU13-208ENST00000488571 GCC2Q8IWJ2 1684 aa17.7■□□□□ 0.42
SNU13-208ENST00000488571 TMEM131LA2VDJ0 1609 aa17.69■□□□□ 0.42
SNU13-208ENST00000488571 CHD2O14647 1828 aaKnown RBP17.68■□□□□ 0.42
SNU13-208ENST00000488571 UNC13BO14795 1591 aa17.67■□□□□ 0.42
SNU13-208ENST00000488571 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
SNU13-208ENST00000488571 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
SNU13-208ENST00000488571 PLEKHG1Q9ULL1 1385 aa17.66■□□□□ 0.42
SNU13-208ENST00000488571 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.42
SNU13-208ENST00000488571 E9PCH4 1651 aa17.64■□□□□ 0.41
SNU13-208ENST00000488571 MSH6P52701 1360 aa17.64■□□□□ 0.41
SNU13-208ENST00000488571 BCANQ96GW7 911 aa17.63■□□□□ 0.41
SNU13-208ENST00000488571 PHLPP1O60346 1717 aa17.62■□□□□ 0.41
SNU13-208ENST00000488571 POTEAQ6S8J7 498 aa17.62■□□□□ 0.41
SNU13-208ENST00000488571 SLAIN2Q9P270 581 aa17.61■□□□□ 0.41
SNU13-208ENST00000488571 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
SNU13-208ENST00000488571 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
SNU13-208ENST00000488571 ADAMTS13Q76LX8 1427 aa17.59■□□□□ 0.41
SNU13-208ENST00000488571 TBX22Q9Y458 520 aa17.59■□□□□ 0.41
SNU13-208ENST00000488571 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.41
SNU13-208ENST00000488571 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.4
SNU13-208ENST00000488571 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
SNU13-208ENST00000488571 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
SNU13-208ENST00000488571 DIP2AQ14689 1571 aa17.57■□□□□ 0.4
SNU13-208ENST00000488571 NCOA3Q9Y6Q9 1424 aa17.56■□□□□ 0.4
SNU13-208ENST00000488571 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
SNU13-208ENST00000488571 JCADQ9P266 1359 aa17.55■□□□□ 0.4
SNU13-208ENST00000488571 NUTM2DQ5VT03 806 aaPredicted RBP17.55■□□□□ 0.4
SNU13-208ENST00000488571 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
SNU13-208ENST00000488571 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.55■□□□□ 0.4
SNU13-208ENST00000488571 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
SNU13-208ENST00000488571 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
SNU13-208ENST00000488571 SETD1AO15047 1707 aaKnown RBP17.52■□□□□ 0.4
SNU13-208ENST00000488571 LRP6O75581 1613 aa17.51■□□□□ 0.39
SNU13-208ENST00000488571 AHDC1Q5TGY3 1603 aaPredicted RBP17.51■□□□□ 0.39
SNU13-208ENST00000488571 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
SNU13-208ENST00000488571 TRPM2O94759 1503 aa17.51■□□□□ 0.39
SNU13-208ENST00000488571 NUP155O75694 1391 aa17.5■□□□□ 0.39
SNU13-208ENST00000488571 NRXN3Q9Y4C0 1643 aa17.5■□□□□ 0.39
SNU13-208ENST00000488571 ABCB7O75027 752 aa17.49■□□□□ 0.39
SNU13-208ENST00000488571 C19orf44Q9H6X5 657 aa17.49■□□□□ 0.39
SNU13-208ENST00000488571 SHPRHQ149N8 1683 aa17.48■□□□□ 0.39
SNU13-208ENST00000488571 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
SNU13-208ENST00000488571 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
SNU13-208ENST00000488571 CADPS2Q86UW7 1296 aa17.47■□□□□ 0.39
SNU13-208ENST00000488571 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
SNU13-208ENST00000488571 SPATA31A6Q5VVP1 1343 aa17.47■□□□□ 0.39
SNU13-208ENST00000488571 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
SNU13-208ENST00000488571 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.39
SNU13-208ENST00000488571 SETBP1Q9Y6X0 1596 aa17.45■□□□□ 0.38
SNU13-208ENST00000488571 ATF3P18847 181 aa17.45■□□□□ 0.38
SNU13-208ENST00000488571 ITGAEP38570 1179 aa17.43■□□□□ 0.38
SNU13-208ENST00000488571 BRINP3Q76B58 766 aa17.43■□□□□ 0.38
SNU13-208ENST00000488571 DCCP43146 1447 aa17.43■□□□□ 0.38
SNU13-208ENST00000488571 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
SNU13-208ENST00000488571 METP08581 1390 aa17.4■□□□□ 0.38
SNU13-208ENST00000488571 NHSL1Q5SYE7 1610 aa17.39■□□□□ 0.38
SNU13-208ENST00000488571 MST1RQ04912 1400 aa17.39■□□□□ 0.38
SNU13-208ENST00000488571 CLTCL1P53675 1640 aa17.39■□□□□ 0.37
SNU13-208ENST00000488571 NEXMIFQ5QGS0 1516 aa17.38■□□□□ 0.37
SNU13-208ENST00000488571 MEX3CQ5U5Q3 659 aaKnown RBP17.38■□□□□ 0.37
SNU13-208ENST00000488571 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
SNU13-208ENST00000488571 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
SNU13-208ENST00000488571 NALCNQ8IZF0 1738 aa17.37■□□□□ 0.37
SNU13-208ENST00000488571 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
SNU13-208ENST00000488571 ZNF326Q5BKZ1 582 aaKnown RBP17.36■□□□□ 0.37
SNU13-208ENST00000488571 ADGRL3Q9HAR2 1447 aa17.35■□□□□ 0.37
SNU13-208ENST00000488571 ZBTB22O15209 634 aa17.34■□□□□ 0.37
SNU13-208ENST00000488571 NUTM2BA6NNL0 878 aaPredicted RBP17.33■□□□□ 0.36
SNU13-208ENST00000488571 NUTM2EB1AL46 878 aaPredicted RBP17.33■□□□□ 0.36
SNU13-208ENST00000488571 NUTM2AQ8IVF1 878 aaPredicted RBP17.33■□□□□ 0.36
SNU13-208ENST00000488571 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
SNU13-208ENST00000488571 KIF1BO60333 1816 aa17.33■□□□□ 0.36
SNU13-208ENST00000488571 UPF1Q92900 1129 aaKnown RBP eCLIP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms