RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ROBO1Q9Y6N7 1651 aa19.15■□□□□ 0.66
TTC3-221ENST00000488522 UNC13BO14795 1591 aa19.15■□□□□ 0.66
TTC3-221ENST00000488522 GCC2Q8IWJ2 1684 aa19.14■□□□□ 0.66
TTC3-221ENST00000488522 RGS17Q9UGC6 210 aaPredicted RBP19.14■□□□□ 0.65
TTC3-221ENST00000488522 PLEKHG1Q9ULL1 1385 aa19.13■□□□□ 0.65
TTC3-221ENST00000488522 TMEM131LA2VDJ0 1609 aa19.13■□□□□ 0.65
TTC3-221ENST00000488522 CHD2O14647 1828 aaKnown RBP19.12■□□□□ 0.65
TTC3-221ENST00000488522 MYO5BQ9ULV0 1848 aa19.12■□□□□ 0.65
TTC3-221ENST00000488522 SLC26A8Q96RN1 970 aa19.11■□□□□ 0.65
TTC3-221ENST00000488522 NCOA3Q9Y6Q9 1424 aa19.08■□□□□ 0.65
TTC3-221ENST00000488522 PROSER2Q86WR7 435 aaPredicted RBP19.08■□□□□ 0.64
TTC3-221ENST00000488522 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
TTC3-221ENST00000488522 DIP2AQ14689 1571 aa19.07■□□□□ 0.64
TTC3-221ENST00000488522 MSH6P52701 1360 aa19.06■□□□□ 0.64
TTC3-221ENST00000488522 E9PCH4 1651 aa19.06■□□□□ 0.64
TTC3-221ENST00000488522 IQGAP3Q86VI3 1631 aa19.06■□□□□ 0.64
TTC3-221ENST00000488522 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
TTC3-221ENST00000488522 ADAMTS13Q76LX8 1427 aa19.03■□□□□ 0.64
TTC3-221ENST00000488522 TBX22Q9Y458 520 aa19.03■□□□□ 0.64
TTC3-221ENST00000488522 PIK3R4Q99570 1358 aa19.03■□□□□ 0.64
TTC3-221ENST00000488522 PHLPP1O60346 1717 aa19.03■□□□□ 0.64
TTC3-221ENST00000488522 HDGFP51858 240 aaKnown RBP19.02■□□□□ 0.64
TTC3-221ENST00000488522 FAM50AQ14320 339 aaKnown RBP19.02■□□□□ 0.64
TTC3-221ENST00000488522 COL16A1Q07092 1604 aaPredicted RBP19.02■□□□□ 0.64
TTC3-221ENST00000488522 ABCF1Q8NE71 845 aaKnown RBP eCLIP19■□□□□ 0.63
TTC3-221ENST00000488522 RBM33Q96EV2 1170 aaKnown RBP19■□□□□ 0.63
TTC3-221ENST00000488522 SLAIN2Q9P270 581 aa19■□□□□ 0.63
TTC3-221ENST00000488522 JCADQ9P266 1359 aa18.99■□□□□ 0.63
TTC3-221ENST00000488522 POTEAQ6S8J7 498 aa18.99■□□□□ 0.63
TTC3-221ENST00000488522 AHDC1Q5TGY3 1603 aaPredicted RBP18.98■□□□□ 0.63
TTC3-221ENST00000488522 PPP1R15AO75807 674 aaPredicted RBP18.97■□□□□ 0.63
TTC3-221ENST00000488522 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
TTC3-221ENST00000488522 TRPM2O94759 1503 aa18.96■□□□□ 0.63
TTC3-221ENST00000488522 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
TTC3-221ENST00000488522 BCANQ96GW7 911 aa18.95■□□□□ 0.62
TTC3-221ENST00000488522 SHPRHQ149N8 1683 aa18.94■□□□□ 0.62
TTC3-221ENST00000488522 NRXN3Q9Y4C0 1643 aa18.93■□□□□ 0.62
TTC3-221ENST00000488522 DCCP43146 1447 aa18.93■□□□□ 0.62
TTC3-221ENST00000488522 XRN1Q8IZH2 1706 aaKnown RBP18.93■□□□□ 0.62
TTC3-221ENST00000488522 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
TTC3-221ENST00000488522 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
TTC3-221ENST00000488522 C19orf44Q9H6X5 657 aa18.91■□□□□ 0.62
TTC3-221ENST00000488522 LRP6O75581 1613 aa18.91■□□□□ 0.62
TTC3-221ENST00000488522 SPATA31A6Q5VVP1 1343 aa18.91■□□□□ 0.62
TTC3-221ENST00000488522 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
TTC3-221ENST00000488522 SPHKAPQ2M3C7 1700 aa18.9■□□□□ 0.62
TTC3-221ENST00000488522 NUP155O75694 1391 aa18.89■□□□□ 0.61
TTC3-221ENST00000488522 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
TTC3-221ENST00000488522 CHGAP10645 457 aaKnown RBP18.87■□□□□ 0.61
TTC3-221ENST00000488522 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
TTC3-221ENST00000488522 NHSL1Q5SYE7 1610 aa18.84■□□□□ 0.61
TTC3-221ENST00000488522 ATF3P18847 181 aa18.83■□□□□ 0.6
TTC3-221ENST00000488522 NUTM2DQ5VT03 806 aaPredicted RBP18.83■□□□□ 0.6
TTC3-221ENST00000488522 ASXL1Q8IXJ9 1541 aa18.83■□□□□ 0.6
TTC3-221ENST00000488522 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
TTC3-221ENST00000488522 C14orf37Q86TY3 774 aa18.82■□□□□ 0.6
TTC3-221ENST00000488522 NEXMIFQ5QGS0 1516 aa18.82■□□□□ 0.6
TTC3-221ENST00000488522 MST1RQ04912 1400 aa18.82■□□□□ 0.6
TTC3-221ENST00000488522 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
TTC3-221ENST00000488522 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
TTC3-221ENST00000488522 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
TTC3-221ENST00000488522 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
TTC3-221ENST00000488522 PRAG1Q86YV5 1406 aa18.78■□□□□ 0.6
TTC3-221ENST00000488522 ADGRL3Q9HAR2 1447 aa18.78■□□□□ 0.6
TTC3-221ENST00000488522 METP08581 1390 aa18.78■□□□□ 0.6
TTC3-221ENST00000488522 LAMC1P11047 1609 aa18.77■□□□□ 0.6
TTC3-221ENST00000488522 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.59
TTC3-221ENST00000488522 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
TTC3-221ENST00000488522 KIF1BO60333 1816 aa18.74■□□□□ 0.59
TTC3-221ENST00000488522 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
TTC3-221ENST00000488522 MEX3CQ5U5Q3 659 aaKnown RBP18.73■□□□□ 0.59
TTC3-221ENST00000488522 NAIPQ13075 1403 aa18.72■□□□□ 0.59
TTC3-221ENST00000488522 ITGAEP38570 1179 aa18.7■□□□□ 0.58
TTC3-221ENST00000488522 PNPLA6Q8IY17 1366 aa18.69■□□□□ 0.58
TTC3-221ENST00000488522 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
TTC3-221ENST00000488522 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
TTC3-221ENST00000488522 LRRC59Q96AG4 307 aaKnown RBP18.69■□□□□ 0.58
TTC3-221ENST00000488522 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
TTC3-221ENST00000488522 RXRBP28702 533 aa18.67■□□□□ 0.58
TTC3-221ENST00000488522 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
TTC3-221ENST00000488522 AFF2P51816 1311 aa18.65■□□□□ 0.58
TTC3-221ENST00000488522 PPLO60437 1756 aa18.64■□□□□ 0.57
TTC3-221ENST00000488522 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
TTC3-221ENST00000488522 RPGRIP1LQ68CZ1 1315 aa18.63■□□□□ 0.57
TTC3-221ENST00000488522 ROBO2Q9HCK4 1378 aa18.63■□□□□ 0.57
TTC3-221ENST00000488522 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
TTC3-221ENST00000488522 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
TTC3-221ENST00000488522 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
TTC3-221ENST00000488522 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
TTC3-221ENST00000488522 RGS12O14924 1447 aa18.62■□□□□ 0.57
TTC3-221ENST00000488522 COL22A1Q8NFW1 1626 aaPredicted RBP18.62■□□□□ 0.57
TTC3-221ENST00000488522 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
TTC3-221ENST00000488522 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
TTC3-221ENST00000488522 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
TTC3-221ENST00000488522 MSH5O43196 834 aa18.58■□□□□ 0.56
TTC3-221ENST00000488522 RBM6P78332 1123 aaKnown RBP18.58■□□□□ 0.56
TTC3-221ENST00000488522 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
TTC3-221ENST00000488522 C8orf37Q96NL8 207 aa18.56■□□□□ 0.56
TTC3-221ENST00000488522 TECPR2O15040 1411 aa18.56■□□□□ 0.56
TTC3-221ENST00000488522 MYOM2P54296 1465 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms