RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 NOS1P29475 1434 aa16.96■□□□□ 0.31
LCN2-206ENST00000488391 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
LCN2-206ENST00000488391 PPP1R15AO75807 674 aaPredicted RBP16.96■□□□□ 0.31
LCN2-206ENST00000488391 APLP2Q06481 763 aa16.95■□□□□ 0.3
LCN2-206ENST00000488391 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
LCN2-206ENST00000488391 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
LCN2-206ENST00000488391 ADGRB3O60242 1522 aa16.94■□□□□ 0.3
LCN2-206ENST00000488391 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
LCN2-206ENST00000488391 HDGFP51858 240 aaKnown RBP16.93■□□□□ 0.3
LCN2-206ENST00000488391 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
LCN2-206ENST00000488391 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
LCN2-206ENST00000488391 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
LCN2-206ENST00000488391 UPF1Q92900 1129 aaKnown RBP eCLIP16.92■□□□□ 0.3
LCN2-206ENST00000488391 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
LCN2-206ENST00000488391 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
LCN2-206ENST00000488391 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
LCN2-206ENST00000488391 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
LCN2-206ENST00000488391 TBX22Q9Y458 520 aa16.91■□□□□ 0.3
LCN2-206ENST00000488391 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
LCN2-206ENST00000488391 MYO5BQ9ULV0 1848 aa16.9■□□□□ 0.3
LCN2-206ENST00000488391 SPATA31A6Q5VVP1 1343 aa16.9■□□□□ 0.3
LCN2-206ENST00000488391 ZFYVE9O95405 1425 aa16.89■□□□□ 0.29
LCN2-206ENST00000488391 LRP6O75581 1613 aa16.88■□□□□ 0.29
LCN2-206ENST00000488391 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
LCN2-206ENST00000488391 ATF3P18847 181 aa16.88■□□□□ 0.29
LCN2-206ENST00000488391 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
LCN2-206ENST00000488391 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
LCN2-206ENST00000488391 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
LCN2-206ENST00000488391 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
LCN2-206ENST00000488391 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
LCN2-206ENST00000488391 RXRBP28702 533 aa16.86■□□□□ 0.29
LCN2-206ENST00000488391 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
LCN2-206ENST00000488391 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.86■□□□□ 0.29
LCN2-206ENST00000488391 NCOA3Q9Y6Q9 1424 aa16.86■□□□□ 0.29
LCN2-206ENST00000488391 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
LCN2-206ENST00000488391 TMEM131LA2VDJ0 1609 aa16.84■□□□□ 0.29
LCN2-206ENST00000488391 GCC2Q8IWJ2 1684 aa16.84■□□□□ 0.29
LCN2-206ENST00000488391 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.28
LCN2-206ENST00000488391 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.28
LCN2-206ENST00000488391 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
LCN2-206ENST00000488391 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
LCN2-206ENST00000488391 AMOTL2Q9Y2J4 779 aa16.82■□□□□ 0.28
LCN2-206ENST00000488391 ADGRL2O95490 1459 aa16.81■□□□□ 0.28
LCN2-206ENST00000488391 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
LCN2-206ENST00000488391 AFF2P51816 1311 aa16.78■□□□□ 0.28
LCN2-206ENST00000488391 SHPRHQ149N8 1683 aa16.78■□□□□ 0.28
LCN2-206ENST00000488391 PIK3R4Q99570 1358 aa16.77■□□□□ 0.28
LCN2-206ENST00000488391 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
LCN2-206ENST00000488391 DDX17Q92841 729 aaKnown RBP16.74■□□□□ 0.27
LCN2-206ENST00000488391 C8orf37Q96NL8 207 aa16.74■□□□□ 0.27
LCN2-206ENST00000488391 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
LCN2-206ENST00000488391 DIP2AQ14689 1571 aa16.73■□□□□ 0.27
LCN2-206ENST00000488391 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
LCN2-206ENST00000488391 E9PCH4 1651 aa16.72■□□□□ 0.27
LCN2-206ENST00000488391 TRPM2O94759 1503 aa16.72■□□□□ 0.27
LCN2-206ENST00000488391 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
LCN2-206ENST00000488391 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
LCN2-206ENST00000488391 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
LCN2-206ENST00000488391 RBM6P78332 1123 aaKnown RBP16.7■□□□□ 0.26
LCN2-206ENST00000488391 NUP155O75694 1391 aa16.69■□□□□ 0.26
LCN2-206ENST00000488391 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
LCN2-206ENST00000488391 MST1RQ04912 1400 aa16.69■□□□□ 0.26
LCN2-206ENST00000488391 UNC13BO14795 1591 aa16.68■□□□□ 0.26
LCN2-206ENST00000488391 ADAMTS2O95450 1211 aa16.68■□□□□ 0.26
LCN2-206ENST00000488391 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
LCN2-206ENST00000488391 DCCP43146 1447 aa16.68■□□□□ 0.26
LCN2-206ENST00000488391 METP08581 1390 aa16.67■□□□□ 0.26
LCN2-206ENST00000488391 RGS12O14924 1447 aa16.67■□□□□ 0.26
LCN2-206ENST00000488391 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
LCN2-206ENST00000488391 ITGAEP38570 1179 aa16.65■□□□□ 0.26
LCN2-206ENST00000488391 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
LCN2-206ENST00000488391 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
LCN2-206ENST00000488391 XRN1Q8IZH2 1706 aaKnown RBP16.63■□□□□ 0.25
LCN2-206ENST00000488391 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
LCN2-206ENST00000488391 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
LCN2-206ENST00000488391 ADGRL3Q9HAR2 1447 aa16.61■□□□□ 0.25
LCN2-206ENST00000488391 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
LCN2-206ENST00000488391 ORAI2Q96SN7 254 aa16.6■□□□□ 0.25
LCN2-206ENST00000488391 USP21Q9UK80 565 aa16.6■□□□□ 0.25
LCN2-206ENST00000488391 C1orf167Q5SNV9 1468 aa16.58■□□□□ 0.24
LCN2-206ENST00000488391 SRCAPQ6ZRS2 3230 aa16.57■□□□□ 0.24
LCN2-206ENST00000488391 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
LCN2-206ENST00000488391 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
LCN2-206ENST00000488391 NALCNQ8IZF0 1738 aa16.56■□□□□ 0.24
LCN2-206ENST00000488391 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
LCN2-206ENST00000488391 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
LCN2-206ENST00000488391 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
LCN2-206ENST00000488391 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
LCN2-206ENST00000488391 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.24
LCN2-206ENST00000488391 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
LCN2-206ENST00000488391 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
LCN2-206ENST00000488391 FOXD1Q16676 465 aa16.51■□□□□ 0.23
LCN2-206ENST00000488391 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
LCN2-206ENST00000488391 PTCH1Q13635 1447 aa16.5■□□□□ 0.23
LCN2-206ENST00000488391 ATRNO75882 1429 aa16.49■□□□□ 0.23
LCN2-206ENST00000488391 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
LCN2-206ENST00000488391 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
LCN2-206ENST00000488391 XPCQ01831 940 aaPredicted RBP16.48■□□□□ 0.23
LCN2-206ENST00000488391 LAMC1P11047 1609 aa16.48■□□□□ 0.23
LCN2-206ENST00000488391 CCDC125Q86Z20 511 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms