RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 R3HCC1Q9Y3T6 440 aaKnown RBP8□□□□□ -1.13
SIK3-212ENST00000488337 CTTNBP2Q8WZ74 1663 aa8□□□□□ -1.13
SIK3-212ENST00000488337 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
SIK3-212ENST00000488337 CCDC173Q0VFZ6 552 aa8□□□□□ -1.13
SIK3-212ENST00000488337 FAM161AQ3B820 660 aa8□□□□□ -1.13
SIK3-212ENST00000488337 GAS2L3Q86XJ1 694 aa8□□□□□ -1.13
SIK3-212ENST00000488337 UACAQ9BZF9 1416 aa7.99□□□□□ -1.13
SIK3-212ENST00000488337 SASS6Q6UVJ0 657 aa7.99□□□□□ -1.13
SIK3-212ENST00000488337 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
SIK3-212ENST00000488337 NINLQ9Y2I6 1382 aa7.99□□□□□ -1.13
SIK3-212ENST00000488337 IRF6O14896 467 aa7.99□□□□□ -1.13
SIK3-212ENST00000488337 ARHGAP31Q2M1Z3 1444 aa7.99□□□□□ -1.13
SIK3-212ENST00000488337 CCDC9Q9Y3X0 531 aaKnown RBP7.98□□□□□ -1.13
SIK3-212ENST00000488337 FMN1Q68DA7 1419 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 FGD6Q6ZV73 1430 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 NESP48681 1621 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 CBX1P83916 185 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 CCDC144AA2RUR9 1427 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.98□□□□□ -1.13
SIK3-212ENST00000488337 NBPF1Q3BBV0 1214 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 MYRIPQ8NFW9 859 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 L3MBTL2Q969R5 705 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 SH3BP1Q9Y3L3 701 aa7.98□□□□□ -1.13
SIK3-212ENST00000488337 KTN1Q86UP2 1357 aaKnown RBP7.98□□□□□ -1.13
SIK3-212ENST00000488337 CLSTN1O94985 981 aa7.97□□□□□ -1.13
SIK3-212ENST00000488337 SLFN14P0C7P3 912 aa7.97□□□□□ -1.13
SIK3-212ENST00000488337 KCNJ4P48050 445 aa7.97□□□□□ -1.13
SIK3-212ENST00000488337 PDLIM2Q96JY6 352 aa7.97□□□□□ -1.13
SIK3-212ENST00000488337 PTMSP20962 102 aa7.97□□□□□ -1.13
SIK3-212ENST00000488337 NOP2P46087 812 aaKnown RBP7.97□□□□□ -1.13
SIK3-212ENST00000488337 NCOA1Q15788 1441 aa7.97□□□□□ -1.13
SIK3-212ENST00000488337 PATL2C9JE40 543 aaKnown RBP7.96□□□□□ -1.13
SIK3-212ENST00000488337 TRAK2O60296 914 aa7.96□□□□□ -1.13
SIK3-212ENST00000488337 BRPF1P55201 1214 aaPredicted RBP7.96□□□□□ -1.13
SIK3-212ENST00000488337 CT47A1Q5JQC4 288 aaPredicted RBP7.96□□□□□ -1.13
SIK3-212ENST00000488337 SKAP1Q86WV1 359 aa7.96□□□□□ -1.13
SIK3-212ENST00000488337 TOPBP1Q92547 1522 aa7.96□□□□□ -1.13
SIK3-212ENST00000488337 APPP05067 770 aa7.96□□□□□ -1.14
SIK3-212ENST00000488337 CC2D1BQ5T0F9 858 aaKnown RBP7.96□□□□□ -1.14
SIK3-212ENST00000488337 SPINK5Q9NQ38 1064 aaPredicted RBP7.96□□□□□ -1.14
SIK3-212ENST00000488337 KIAA1107Q9UPP5 1409 aa7.96□□□□□ -1.14
SIK3-212ENST00000488337 LOC102724159A0A0B4J2E5 919 aa7.96□□□□□ -1.14
SIK3-212ENST00000488337 IGSF3O75054 1194 aa7.96□□□□□ -1.14
SIK3-212ENST00000488337 GABPB1Q06547 395 aaPredicted RBP7.96□□□□□ -1.14
SIK3-212ENST00000488337 PWP2Q15269 919 aaKnown RBP7.96□□□□□ -1.14
SIK3-212ENST00000488337 MPHOSPH9Q99550 1183 aa7.96□□□□□ -1.14
SIK3-212ENST00000488337 TSPYL1Q9H0U9 437 aa7.96□□□□□ -1.14
SIK3-212ENST00000488337 MRC2Q9UBG0 1479 aa7.96□□□□□ -1.14
SIK3-212ENST00000488337 PANK3Q9H999 370 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 NCOA3Q9Y6Q9 1424 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 HSP90AB1P08238 724 aaKnown RBP7.95□□□□□ -1.14
SIK3-212ENST00000488337 AEBP1Q8IUX7 1158 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 PLCD4Q9BRC7 762 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 FGD5Q6ZNL6 1462 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 HFM1A2PYH4 1435 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 CASKIN1Q8WXD9 1431 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 MLECQ14165 292 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 SENP3-EIF4A1A0A087X0R7 540 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 MCM5P33992 734 aa7.95□□□□□ -1.14
SIK3-212ENST00000488337 KIF21AQ7Z4S6 1674 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 DDIT3P35638 169 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 CSPP1Q1MSJ5 1256 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 EP400NLQ6ZTU2 488 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 ZBTB9Q96C00 473 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 FEZ2Q9UHY8 353 aaPredicted RBP7.94□□□□□ -1.14
SIK3-212ENST00000488337 LRPPRCP42704 1394 aaKnown RBP7.94□□□□□ -1.14
SIK3-212ENST00000488337 TRIM6-TRIM34B2RNG4 842 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 TIGD1Q96MW7 591 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 TRIM34Q9BYJ4 488 aa7.94□□□□□ -1.14
SIK3-212ENST00000488337 PNISRQ8TF01 805 aaKnown RBP7.93□□□□□ -1.14
SIK3-212ENST00000488337 ANKRD7Q92527 254 aa7.93□□□□□ -1.14
SIK3-212ENST00000488337 ZNF692Q9BU19 519 aaPredicted RBP7.93□□□□□ -1.14
SIK3-212ENST00000488337 FYCO1Q9BQS8 1478 aa7.93□□□□□ -1.14
SIK3-212ENST00000488337 BORCS6Q96GS4 357 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 NAIPQ13075 1403 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 HMGN5P82970 282 aaKnown RBP7.92□□□□□ -1.14
SIK3-212ENST00000488337 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 URB2Q14146 1524 aaKnown RBP7.92□□□□□ -1.14
SIK3-212ENST00000488337 RBM25P49756 843 aaKnown RBP7.92□□□□□ -1.14
SIK3-212ENST00000488337 SATB1Q01826 763 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 BECN1Q14457 450 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 OSCARQ8IYS5 282 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 NCAPGQ9BPX3 1015 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 ABCA10Q8WWZ4 1543 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 RTEL1-TNFRSF6BF6WH68 1400 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 CCDC7Q96M83 1385 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 KIF3AQ9Y496 699 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 CEP83Q9Y592 693 aa7.92□□□□□ -1.14
SIK3-212ENST00000488337 FEZ1Q99689 392 aa7.91□□□□□ -1.14
SIK3-212ENST00000488337 RAI14Q9P0K7 980 aa7.91□□□□□ -1.14
SIK3-212ENST00000488337 ZKSCAN5Q9Y2L8 839 aa7.91□□□□□ -1.14
SIK3-212ENST00000488337 KIF16BQ96L93 1317 aa7.91□□□□□ -1.14
SIK3-212ENST00000488337 MFAP1P55081 439 aaKnown RBP7.91□□□□□ -1.14
SIK3-212ENST00000488337 XPCQ01831 940 aaPredicted RBP7.91□□□□□ -1.14
SIK3-212ENST00000488337 HSP90AB3PQ58FF7 597 aa7.91□□□□□ -1.14
SIK3-212ENST00000488337 ZNF777Q9ULD5 760 aaPredicted RBP7.91□□□□□ -1.14
SIK3-212ENST00000488337 PCF11O94913 1555 aaKnown RBP7.91□□□□□ -1.14
SIK3-212ENST00000488337 MSNP26038 577 aaKnown RBP7.91□□□□□ -1.14
SIK3-212ENST00000488337 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.14
SIK3-212ENST00000488337 NBPF11Q86T75 865 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms