RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 HSPA2P54652 639 aa22.73■■□□□ 1.23
TM2D1-208ENST00000488206 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
TM2D1-208ENST00000488206 PPLO60437 1756 aa22.73■■□□□ 1.23
TM2D1-208ENST00000488206 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
TM2D1-208ENST00000488206 NEUROD1Q13562 356 aa22.7■■□□□ 1.22
TM2D1-208ENST00000488206 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.7■■□□□ 1.22
TM2D1-208ENST00000488206 HDGFP51858 240 aaKnown RBP22.69■■□□□ 1.22
TM2D1-208ENST00000488206 RGL3Q3MIN7 710 aa22.69■■□□□ 1.22
TM2D1-208ENST00000488206 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
TM2D1-208ENST00000488206 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
TM2D1-208ENST00000488206 MYOM2P54296 1465 aa22.68■■□□□ 1.22
TM2D1-208ENST00000488206 ANKLE2Q86XL3 938 aa22.68■■□□□ 1.22
TM2D1-208ENST00000488206 PPP1R15AO75807 674 aaPredicted RBP22.67■■□□□ 1.22
TM2D1-208ENST00000488206 TONSLQ96HA7 1378 aa22.66■■□□□ 1.22
TM2D1-208ENST00000488206 MED14O60244 1454 aa22.66■■□□□ 1.22
TM2D1-208ENST00000488206 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
TM2D1-208ENST00000488206 STRCQ7RTU9 1775 aa22.65■■□□□ 1.22
TM2D1-208ENST00000488206 IQGAP1P46940 1657 aa22.64■■□□□ 1.21
TM2D1-208ENST00000488206 PLEKHG1Q9ULL1 1385 aa22.63■■□□□ 1.21
TM2D1-208ENST00000488206 LTKP29376 864 aa22.63■■□□□ 1.21
TM2D1-208ENST00000488206 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
TM2D1-208ENST00000488206 VGFO15240 615 aaPredicted RBP22.62■■□□□ 1.21
TM2D1-208ENST00000488206 NCKAP5LQ9HCH0 1330 aa22.61■■□□□ 1.21
TM2D1-208ENST00000488206 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
TM2D1-208ENST00000488206 STAC3Q96MF2 364 aa22.61■■□□□ 1.21
TM2D1-208ENST00000488206 SETBP1Q9Y6X0 1596 aa22.61■■□□□ 1.21
TM2D1-208ENST00000488206 DIP2AQ14689 1571 aa22.59■■□□□ 1.21
TM2D1-208ENST00000488206 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
TM2D1-208ENST00000488206 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
TM2D1-208ENST00000488206 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
TM2D1-208ENST00000488206 DCAF11Q8TEB1 546 aa22.58■■□□□ 1.21
TM2D1-208ENST00000488206 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
TM2D1-208ENST00000488206 TIMELESSQ9UNS1 1208 aa22.57■■□□□ 1.2
TM2D1-208ENST00000488206 LAMC1P11047 1609 aa22.56■■□□□ 1.2
TM2D1-208ENST00000488206 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
TM2D1-208ENST00000488206 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
TM2D1-208ENST00000488206 PRAG1Q86YV5 1406 aa22.54■■□□□ 1.2
TM2D1-208ENST00000488206 KDM2AQ9Y2K7 1162 aa22.53■■□□□ 1.2
TM2D1-208ENST00000488206 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.2
TM2D1-208ENST00000488206 BCANQ96GW7 911 aa22.52■■□□□ 1.2
TM2D1-208ENST00000488206 SETD1AO15047 1707 aaKnown RBP22.51■■□□□ 1.19
TM2D1-208ENST00000488206 ALKQ9UM73 1620 aa22.5■■□□□ 1.19
TM2D1-208ENST00000488206 KIAA1210Q9ULL0 1709 aa22.49■■□□□ 1.19
TM2D1-208ENST00000488206 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
TM2D1-208ENST00000488206 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
TM2D1-208ENST00000488206 PIK3R4Q99570 1358 aa22.45■■□□□ 1.18
TM2D1-208ENST00000488206 TRPM1Q7Z4N2 1603 aa22.45■■□□□ 1.18
TM2D1-208ENST00000488206 ASXL1Q8IXJ9 1541 aa22.44■■□□□ 1.18
TM2D1-208ENST00000488206 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
TM2D1-208ENST00000488206 NWD1Q149M9 1564 aa22.42■■□□□ 1.18
TM2D1-208ENST00000488206 RALGAPBQ86X10 1494 aa22.42■■□□□ 1.18
TM2D1-208ENST00000488206 ADGRB1O14514 1584 aa22.41■■□□□ 1.18
TM2D1-208ENST00000488206 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
TM2D1-208ENST00000488206 METP08581 1390 aa22.39■■□□□ 1.18
TM2D1-208ENST00000488206 XRN1Q8IZH2 1706 aaKnown RBP22.39■■□□□ 1.17
TM2D1-208ENST00000488206 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
TM2D1-208ENST00000488206 NBPF8Q3BBV2 869 aa22.37■■□□□ 1.17
TM2D1-208ENST00000488206 KNDC1Q76NI1 1749 aa22.37■■□□□ 1.17
TM2D1-208ENST00000488206 NKTRP30414 1462 aaKnown RBP22.36■■□□□ 1.17
TM2D1-208ENST00000488206 ROCK2O75116 1388 aaKnown RBP22.36■■□□□ 1.17
TM2D1-208ENST00000488206 PTPRUQ92729 1446 aa22.35■■□□□ 1.17
TM2D1-208ENST00000488206 LRPPRCP42704 1394 aaKnown RBP22.35■■□□□ 1.17
TM2D1-208ENST00000488206 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
TM2D1-208ENST00000488206 GPRASP1Q5JY77 1395 aa22.34■■□□□ 1.17
TM2D1-208ENST00000488206 CPS1P31327 1500 aa22.33■■□□□ 1.17
TM2D1-208ENST00000488206 STRCP1A6NGW2 1772 aa22.33■■□□□ 1.16
TM2D1-208ENST00000488206 TECPR2O15040 1411 aa22.32■■□□□ 1.16
TM2D1-208ENST00000488206 PTCH1Q13635 1447 aa22.32■■□□□ 1.16
TM2D1-208ENST00000488206 KCNA6P17658 529 aa22.32■■□□□ 1.16
TM2D1-208ENST00000488206 ZNF335Q9H4Z2 1342 aaPredicted RBP22.31■■□□□ 1.16
TM2D1-208ENST00000488206 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
TM2D1-208ENST00000488206 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
TM2D1-208ENST00000488206 ZEB1P37275 1124 aaPredicted RBP22.3■■□□□ 1.16
TM2D1-208ENST00000488206 ABCC11Q96J66 1382 aa22.29■■□□□ 1.16
TM2D1-208ENST00000488206 NBPF1Q3BBV0 1214 aa22.29■■□□□ 1.16
TM2D1-208ENST00000488206 AMOTL2Q9Y2J4 779 aa22.29■■□□□ 1.16
TM2D1-208ENST00000488206 LTBP4Q8N2S1 1624 aa22.28■■□□□ 1.16
TM2D1-208ENST00000488206 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
TM2D1-208ENST00000488206 STK26Q9P289 416 aa22.25■■□□□ 1.15
TM2D1-208ENST00000488206 FAM135BQ49AJ0 1406 aa22.24■■□□□ 1.15
TM2D1-208ENST00000488206 CARD11Q9BXL7 1154 aa22.24■■□□□ 1.15
TM2D1-208ENST00000488206 EIF3AQ14152 1382 aaKnown RBP22.24■■□□□ 1.15
TM2D1-208ENST00000488206 ROBO2Q9HCK4 1378 aa22.24■■□□□ 1.15
TM2D1-208ENST00000488206 LRRC7Q96NW7 1537 aa22.22■■□□□ 1.15
TM2D1-208ENST00000488206 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
TM2D1-208ENST00000488206 SIRT1Q96EB6 747 aa22.2■■□□□ 1.14
TM2D1-208ENST00000488206 NCOA3Q9Y6Q9 1424 aa22.19■■□□□ 1.14
TM2D1-208ENST00000488206 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
TM2D1-208ENST00000488206 PROSER2Q86WR7 435 aaPredicted RBP22.18■■□□□ 1.14
TM2D1-208ENST00000488206 USP47Q96K76 1375 aa22.16■■□□□ 1.14
TM2D1-208ENST00000488206 XIRP1Q702N8 1843 aaKnown RBP22.16■■□□□ 1.14
TM2D1-208ENST00000488206 PRAM1Q96QH2 718 aa22.16■■□□□ 1.14
TM2D1-208ENST00000488206 NALCNQ8IZF0 1738 aa22.16■■□□□ 1.14
TM2D1-208ENST00000488206 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
TM2D1-208ENST00000488206 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
TM2D1-208ENST00000488206 PLEKHH1Q9ULM0 1364 aa22.15■■□□□ 1.14
TM2D1-208ENST00000488206 POGKQ9P215 609 aa22.15■■□□□ 1.14
TM2D1-208ENST00000488206 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
TM2D1-208ENST00000488206 ADGRB2O60241 1585 aa22.14■■□□□ 1.13
TM2D1-208ENST00000488206 CENPJQ9HC77 1338 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms