RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 TMEM94Q12767 1356 aa26.15■■□□□ 1.78
ITSN1-230ENST00000488166 E9PCH4 1651 aa26.13■■□□□ 1.77
ITSN1-230ENST00000488166 PPP1R15AO75807 674 aaPredicted RBP26.12■■□□□ 1.77
ITSN1-230ENST00000488166 CHGAP10645 457 aaKnown RBP26.12■■□□□ 1.77
ITSN1-230ENST00000488166 RBM33Q96EV2 1170 aaKnown RBP26.12■■□□□ 1.77
ITSN1-230ENST00000488166 TMEM131LA2VDJ0 1609 aa26.12■■□□□ 1.77
ITSN1-230ENST00000488166 ITGAEP38570 1179 aa26.1■■□□□ 1.77
ITSN1-230ENST00000488166 HDGFP51858 240 aaKnown RBP26.1■■□□□ 1.77
ITSN1-230ENST00000488166 NWD1Q149M9 1564 aa26.1■■□□□ 1.77
ITSN1-230ENST00000488166 CHD2O14647 1828 aaKnown RBP26.09■■□□□ 1.77
ITSN1-230ENST00000488166 RIMS2Q9UQ26 1411 aa26.09■■□□□ 1.77
ITSN1-230ENST00000488166 NKTRP30414 1462 aaKnown RBP26.09■■□□□ 1.77
ITSN1-230ENST00000488166 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
ITSN1-230ENST00000488166 IQGAP3Q86VI3 1631 aa26.08■■□□□ 1.77
ITSN1-230ENST00000488166 ROCK1Q13464 1354 aa26.07■■□□□ 1.76
ITSN1-230ENST00000488166 ZFYVE9O95405 1425 aa26.07■■□□□ 1.76
ITSN1-230ENST00000488166 FAM135BQ49AJ0 1406 aa26.06■■□□□ 1.76
ITSN1-230ENST00000488166 PLEKHG1Q9ULL1 1385 aa26.06■■□□□ 1.76
ITSN1-230ENST00000488166 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
ITSN1-230ENST00000488166 MSH6P52701 1360 aa26.03■■□□□ 1.76
ITSN1-230ENST00000488166 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.01■■□□□ 1.75
ITSN1-230ENST00000488166 NUP155O75694 1391 aa26■■□□□ 1.75
ITSN1-230ENST00000488166 NUTM2DQ5VT03 806 aaPredicted RBP26■■□□□ 1.75
ITSN1-230ENST00000488166 PHLPP1O60346 1717 aa25.97■■□□□ 1.75
ITSN1-230ENST00000488166 TBX22Q9Y458 520 aa25.95■■□□□ 1.74
ITSN1-230ENST00000488166 DIP2AQ14689 1571 aa25.95■■□□□ 1.74
ITSN1-230ENST00000488166 SPHKAPQ2M3C7 1700 aa25.94■■□□□ 1.74
ITSN1-230ENST00000488166 C14orf37Q86TY3 774 aa25.94■■□□□ 1.74
ITSN1-230ENST00000488166 SLAIN2Q9P270 581 aa25.93■■□□□ 1.74
ITSN1-230ENST00000488166 ADAMTS13Q76LX8 1427 aa25.9■■□□□ 1.74
ITSN1-230ENST00000488166 RGS17Q9UGC6 210 aaPredicted RBP25.89■■□□□ 1.74
ITSN1-230ENST00000488166 TRPM2O94759 1503 aa25.88■■□□□ 1.73
ITSN1-230ENST00000488166 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.88■■□□□ 1.73
ITSN1-230ENST00000488166 NCOA3Q9Y6Q9 1424 aa25.86■■□□□ 1.73
ITSN1-230ENST00000488166 PIK3R4Q99570 1358 aa25.85■■□□□ 1.73
ITSN1-230ENST00000488166 ZNF326Q5BKZ1 582 aaKnown RBP25.84■■□□□ 1.73
ITSN1-230ENST00000488166 ATF3P18847 181 aa25.82■■□□□ 1.72
ITSN1-230ENST00000488166 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
ITSN1-230ENST00000488166 KIF1BO60333 1816 aa25.81■■□□□ 1.72
ITSN1-230ENST00000488166 JCADQ9P266 1359 aa25.81■■□□□ 1.72
ITSN1-230ENST00000488166 CADPS2Q86UW7 1296 aa25.8■■□□□ 1.72
ITSN1-230ENST00000488166 C19orf44Q9H6X5 657 aa25.8■■□□□ 1.72
ITSN1-230ENST00000488166 COL16A1Q07092 1604 aaPredicted RBP25.8■■□□□ 1.72
ITSN1-230ENST00000488166 NRXN3Q9Y4C0 1643 aa25.79■■□□□ 1.72
ITSN1-230ENST00000488166 PTPRUQ92729 1446 aa25.78■■□□□ 1.72
ITSN1-230ENST00000488166 CLTCL1P53675 1640 aa25.77■■□□□ 1.72
ITSN1-230ENST00000488166 POTEAQ6S8J7 498 aa25.77■■□□□ 1.72
ITSN1-230ENST00000488166 SETBP1Q9Y6X0 1596 aa25.77■■□□□ 1.72
ITSN1-230ENST00000488166 XRN1Q8IZH2 1706 aaKnown RBP25.75■■□□□ 1.71
ITSN1-230ENST00000488166 RRBP1Q9P2E9 1410 aaKnown RBP25.74■■□□□ 1.71
ITSN1-230ENST00000488166 AHDC1Q5TGY3 1603 aaPredicted RBP25.72■■□□□ 1.71
ITSN1-230ENST00000488166 NAIPQ13075 1403 aa25.71■■□□□ 1.71
ITSN1-230ENST00000488166 SHPRHQ149N8 1683 aa25.71■■□□□ 1.71
ITSN1-230ENST00000488166 NEXMIFQ5QGS0 1516 aa25.7■■□□□ 1.7
ITSN1-230ENST00000488166 MEX3CQ5U5Q3 659 aaKnown RBP25.7■■□□□ 1.7
ITSN1-230ENST00000488166 TRIM52Q96A61 297 aa25.69■■□□□ 1.7
ITSN1-230ENST00000488166 METP08581 1390 aa25.68■■□□□ 1.7
ITSN1-230ENST00000488166 SPATA31A6Q5VVP1 1343 aa25.67■■□□□ 1.7
ITSN1-230ENST00000488166 SETD1AO15047 1707 aaKnown RBP25.67■■□□□ 1.7
ITSN1-230ENST00000488166 DCCP43146 1447 aa25.67■■□□□ 1.7
ITSN1-230ENST00000488166 BRINP3Q76B58 766 aa25.66■■□□□ 1.7
ITSN1-230ENST00000488166 LRP6O75581 1613 aa25.65■■□□□ 1.7
ITSN1-230ENST00000488166 NALCNQ8IZF0 1738 aa25.63■■□□□ 1.69
ITSN1-230ENST00000488166 ASXL1Q8IXJ9 1541 aa25.63■■□□□ 1.69
ITSN1-230ENST00000488166 NHSL1Q5SYE7 1610 aa25.61■■□□□ 1.69
ITSN1-230ENST00000488166 MST1RQ04912 1400 aa25.6■■□□□ 1.69
ITSN1-230ENST00000488166 NUTM2BA6NNL0 878 aaPredicted RBP25.59■■□□□ 1.69
ITSN1-230ENST00000488166 NUTM2EB1AL46 878 aaPredicted RBP25.59■■□□□ 1.69
ITSN1-230ENST00000488166 NUTM2AQ8IVF1 878 aaPredicted RBP25.59■■□□□ 1.69
ITSN1-230ENST00000488166 SLC4A1APQ9BWU0 796 aaKnown RBP25.59■■□□□ 1.69
ITSN1-230ENST00000488166 HFM1A2PYH4 1435 aa25.59■■□□□ 1.69
ITSN1-230ENST00000488166 ADGRL3Q9HAR2 1447 aa25.58■■□□□ 1.69
ITSN1-230ENST00000488166 VGFO15240 615 aaPredicted RBP25.57■■□□□ 1.68
ITSN1-230ENST00000488166 PPLO60437 1756 aa25.56■■□□□ 1.68
ITSN1-230ENST00000488166 ZNF772Q68DY9 489 aaPredicted RBP25.56■■□□□ 1.68
ITSN1-230ENST00000488166 SETD5Q9C0A6 1442 aa25.52■■□□□ 1.68
ITSN1-230ENST00000488166 LRRC59Q96AG4 307 aaKnown RBP25.51■■□□□ 1.67
ITSN1-230ENST00000488166 RPGRIP1LQ68CZ1 1315 aa25.5■■□□□ 1.67
ITSN1-230ENST00000488166 DDX17Q92841 729 aaKnown RBP25.5■■□□□ 1.67
ITSN1-230ENST00000488166 PTCH1Q13635 1447 aa25.48■■□□□ 1.67
ITSN1-230ENST00000488166 FOXD1Q16676 465 aa25.47■■□□□ 1.67
ITSN1-230ENST00000488166 C1orf167Q5SNV9 1468 aa25.46■■□□□ 1.67
ITSN1-230ENST00000488166 ROBO2Q9HCK4 1378 aa25.45■■□□□ 1.67
ITSN1-230ENST00000488166 AFF2P51816 1311 aa25.44■■□□□ 1.66
ITSN1-230ENST00000488166 RXRBP28702 533 aa25.44■■□□□ 1.66
ITSN1-230ENST00000488166 PNPLA6Q8IY17 1366 aa25.42■■□□□ 1.66
ITSN1-230ENST00000488166 CCDC144AA2RUR9 1427 aa25.41■■□□□ 1.66
ITSN1-230ENST00000488166 C8orf37Q96NL8 207 aa25.41■■□□□ 1.66
ITSN1-230ENST00000488166 ORAI2Q96SN7 254 aa25.4■■□□□ 1.66
ITSN1-230ENST00000488166 LAMC1P11047 1609 aa25.39■■□□□ 1.66
ITSN1-230ENST00000488166 RGL3Q3MIN7 710 aa25.39■■□□□ 1.66
ITSN1-230ENST00000488166 IFT172Q9UG01 1749 aa25.39■■□□□ 1.65
ITSN1-230ENST00000488166 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
ITSN1-230ENST00000488166 ADGRF5Q8IZF2 1346 aa25.36■■□□□ 1.65
ITSN1-230ENST00000488166 ADAMTS2O95450 1211 aa25.35■■□□□ 1.65
ITSN1-230ENST00000488166 MPHOSPH9Q99550 1183 aa25.35■■□□□ 1.65
ITSN1-230ENST00000488166 UPF1Q92900 1129 aaKnown RBP eCLIP25.33■■□□□ 1.65
ITSN1-230ENST00000488166 NGLY1Q96IV0 654 aa25.33■■□□□ 1.65
ITSN1-230ENST00000488166 STK26Q9P289 416 aa25.33■■□□□ 1.65
ITSN1-230ENST00000488166 CDK12Q9NYV4 1490 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms