RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
NIPAL3-207ENST00000488155 HSPA1LP34931 641 aa17.19■□□□□ 0.34
NIPAL3-207ENST00000488155 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
NIPAL3-207ENST00000488155 RRBP1Q9P2E9 1410 aaKnown RBP17.18■□□□□ 0.34
NIPAL3-207ENST00000488155 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
NIPAL3-207ENST00000488155 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
NIPAL3-207ENST00000488155 SPHKAPQ2M3C7 1700 aa17.16■□□□□ 0.34
NIPAL3-207ENST00000488155 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
NIPAL3-207ENST00000488155 ILDR2Q71H61 639 aa17.15■□□□□ 0.34
NIPAL3-207ENST00000488155 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.34
NIPAL3-207ENST00000488155 ZFYVE9O95405 1425 aa17.13■□□□□ 0.33
NIPAL3-207ENST00000488155 KCNA6P17658 529 aa17.13■□□□□ 0.33
NIPAL3-207ENST00000488155 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
NIPAL3-207ENST00000488155 HDGFP51858 240 aaKnown RBP17.11■□□□□ 0.33
NIPAL3-207ENST00000488155 NAIPQ13075 1403 aa17.11■□□□□ 0.33
NIPAL3-207ENST00000488155 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
NIPAL3-207ENST00000488155 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
NIPAL3-207ENST00000488155 PLEKHG1Q9ULL1 1385 aa17.09■□□□□ 0.33
NIPAL3-207ENST00000488155 KIF1BO60333 1816 aa17.09■□□□□ 0.33
NIPAL3-207ENST00000488155 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
NIPAL3-207ENST00000488155 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
NIPAL3-207ENST00000488155 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
NIPAL3-207ENST00000488155 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
NIPAL3-207ENST00000488155 MED1Q15648 1581 aaPredicted RBP17.05■□□□□ 0.32
NIPAL3-207ENST00000488155 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
NIPAL3-207ENST00000488155 NKTRP30414 1462 aaKnown RBP17.03■□□□□ 0.32
NIPAL3-207ENST00000488155 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
NIPAL3-207ENST00000488155 ROBO1Q9Y6N7 1651 aa17.02■□□□□ 0.32
NIPAL3-207ENST00000488155 HFM1A2PYH4 1435 aa17.02■□□□□ 0.31
NIPAL3-207ENST00000488155 C14orf37Q86TY3 774 aa17■□□□□ 0.31
NIPAL3-207ENST00000488155 MSH6P52701 1360 aa17■□□□□ 0.31
NIPAL3-207ENST00000488155 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
NIPAL3-207ENST00000488155 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
NIPAL3-207ENST00000488155 TRPM2O94759 1503 aa16.99■□□□□ 0.31
NIPAL3-207ENST00000488155 DIP2AQ14689 1571 aa16.98■□□□□ 0.31
NIPAL3-207ENST00000488155 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
NIPAL3-207ENST00000488155 FAM135BQ49AJ0 1406 aa16.96■□□□□ 0.31
NIPAL3-207ENST00000488155 FOXD1Q16676 465 aa16.96■□□□□ 0.31
NIPAL3-207ENST00000488155 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
NIPAL3-207ENST00000488155 AMOTL2Q9Y2J4 779 aa16.96■□□□□ 0.31
NIPAL3-207ENST00000488155 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.3
NIPAL3-207ENST00000488155 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
NIPAL3-207ENST00000488155 SOCS7O14512 581 aa16.95■□□□□ 0.3
NIPAL3-207ENST00000488155 PHLPP1O60346 1717 aa16.94■□□□□ 0.3
NIPAL3-207ENST00000488155 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
NIPAL3-207ENST00000488155 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
NIPAL3-207ENST00000488155 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
NIPAL3-207ENST00000488155 PPLO60437 1756 aa16.92■□□□□ 0.3
NIPAL3-207ENST00000488155 XRN1Q8IZH2 1706 aaKnown RBP16.91■□□□□ 0.3
NIPAL3-207ENST00000488155 METP08581 1390 aa16.9■□□□□ 0.3
NIPAL3-207ENST00000488155 ATF3P18847 181 aa16.89■□□□□ 0.29
NIPAL3-207ENST00000488155 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
NIPAL3-207ENST00000488155 NCOA3Q9Y6Q9 1424 aa16.87■□□□□ 0.29
NIPAL3-207ENST00000488155 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-207ENST00000488155 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
NIPAL3-207ENST00000488155 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
NIPAL3-207ENST00000488155 VGFO15240 615 aaPredicted RBP16.85■□□□□ 0.29
NIPAL3-207ENST00000488155 RGL3Q3MIN7 710 aa16.85■□□□□ 0.29
NIPAL3-207ENST00000488155 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
NIPAL3-207ENST00000488155 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.28
NIPAL3-207ENST00000488155 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
NIPAL3-207ENST00000488155 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
NIPAL3-207ENST00000488155 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
NIPAL3-207ENST00000488155 RGS17Q9UGC6 210 aaPredicted RBP16.82■□□□□ 0.28
NIPAL3-207ENST00000488155 IFT172Q9UG01 1749 aa16.81■□□□□ 0.28
NIPAL3-207ENST00000488155 JCADQ9P266 1359 aa16.79■□□□□ 0.28
NIPAL3-207ENST00000488155 BRINP3Q76B58 766 aa16.79■□□□□ 0.28
NIPAL3-207ENST00000488155 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
NIPAL3-207ENST00000488155 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-207ENST00000488155 MST1RQ04912 1400 aa16.77■□□□□ 0.27
NIPAL3-207ENST00000488155 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.27
NIPAL3-207ENST00000488155 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.27
NIPAL3-207ENST00000488155 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
NIPAL3-207ENST00000488155 DCCP43146 1447 aa16.76■□□□□ 0.27
NIPAL3-207ENST00000488155 SPATA31E1Q6ZUB1 1445 aa16.76■□□□□ 0.27
NIPAL3-207ENST00000488155 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
NIPAL3-207ENST00000488155 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
NIPAL3-207ENST00000488155 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
NIPAL3-207ENST00000488155 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
NIPAL3-207ENST00000488155 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
NIPAL3-207ENST00000488155 STK26Q9P289 416 aa16.74■□□□□ 0.27
NIPAL3-207ENST00000488155 PTCH1Q13635 1447 aa16.72■□□□□ 0.27
NIPAL3-207ENST00000488155 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
NIPAL3-207ENST00000488155 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
NIPAL3-207ENST00000488155 LRP6O75581 1613 aa16.71■□□□□ 0.27
NIPAL3-207ENST00000488155 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
NIPAL3-207ENST00000488155 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
NIPAL3-207ENST00000488155 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
NIPAL3-207ENST00000488155 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.27
NIPAL3-207ENST00000488155 C1orf167Q5SNV9 1468 aa16.7■□□□□ 0.26
NIPAL3-207ENST00000488155 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
NIPAL3-207ENST00000488155 ORAI2Q96SN7 254 aa16.69■□□□□ 0.26
NIPAL3-207ENST00000488155 SPATA31A6Q5VVP1 1343 aa16.69■□□□□ 0.26
NIPAL3-207ENST00000488155 ACIN1Q9UKV3 1341 aaKnown RBP16.69■□□□□ 0.26
NIPAL3-207ENST00000488155 RGPD8O14715 1765 aaPredicted RBP16.67■□□□□ 0.26
NIPAL3-207ENST00000488155 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
NIPAL3-207ENST00000488155 NUTM2FA1L443 756 aa16.66■□□□□ 0.26
NIPAL3-207ENST00000488155 PIK3C2GO75747 1445 aa16.66■□□□□ 0.26
NIPAL3-207ENST00000488155 PRAG1Q86YV5 1406 aa16.65■□□□□ 0.26
NIPAL3-207ENST00000488155 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms