RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 IQSEC2Q5JU85 1478 aa13.83□□□□□ -0.2
LCN2-205ENST00000487719 ZNF326Q5BKZ1 582 aaKnown RBP13.83□□□□□ -0.2
LCN2-205ENST00000487719 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
LCN2-205ENST00000487719 ZNF335Q9H4Z2 1342 aaPredicted RBP13.82□□□□□ -0.2
LCN2-205ENST00000487719 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
LCN2-205ENST00000487719 CCDC144AA2RUR9 1427 aa13.81□□□□□ -0.2
LCN2-205ENST00000487719 DIP2AQ14689 1571 aa13.8□□□□□ -0.2
LCN2-205ENST00000487719 LTKP29376 864 aa13.8□□□□□ -0.2
LCN2-205ENST00000487719 FBXO41Q8TF61 875 aa13.8□□□□□ -0.2
LCN2-205ENST00000487719 ZFYVE9O95405 1425 aa13.8□□□□□ -0.2
LCN2-205ENST00000487719 HRCP23327 699 aa13.79□□□□□ -0.2
LCN2-205ENST00000487719 PLEKHG1Q9ULL1 1385 aa13.79□□□□□ -0.2
LCN2-205ENST00000487719 PPLO60437 1756 aa13.78□□□□□ -0.2
LCN2-205ENST00000487719 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
LCN2-205ENST00000487719 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
LCN2-205ENST00000487719 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
LCN2-205ENST00000487719 FOXD1Q16676 465 aa13.74□□□□□ -0.21
LCN2-205ENST00000487719 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
LCN2-205ENST00000487719 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
LCN2-205ENST00000487719 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
LCN2-205ENST00000487719 SLC26A8Q96RN1 970 aa13.73□□□□□ -0.21
LCN2-205ENST00000487719 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
LCN2-205ENST00000487719 NWD1Q149M9 1564 aa13.72□□□□□ -0.21
LCN2-205ENST00000487719 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
LCN2-205ENST00000487719 ILDR1Q86SU0 546 aaPredicted RBP13.72□□□□□ -0.21
LCN2-205ENST00000487719 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
LCN2-205ENST00000487719 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
LCN2-205ENST00000487719 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.22
LCN2-205ENST00000487719 PIK3R4Q99570 1358 aa13.71□□□□□ -0.22
LCN2-205ENST00000487719 KCNA6P17658 529 aa13.7□□□□□ -0.22
LCN2-205ENST00000487719 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
LCN2-205ENST00000487719 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
LCN2-205ENST00000487719 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
LCN2-205ENST00000487719 TOM1O60784 492 aa13.69□□□□□ -0.22
LCN2-205ENST00000487719 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
LCN2-205ENST00000487719 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
LCN2-205ENST00000487719 ANKRD30BQ9BXX2 1392 aa13.68□□□□□ -0.22
LCN2-205ENST00000487719 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
LCN2-205ENST00000487719 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
LCN2-205ENST00000487719 ADAMTS13Q76LX8 1427 aa13.66□□□□□ -0.22
LCN2-205ENST00000487719 LAMC1P11047 1609 aa13.66□□□□□ -0.22
LCN2-205ENST00000487719 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
LCN2-205ENST00000487719 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
LCN2-205ENST00000487719 C14orf37Q86TY3 774 aa13.64□□□□□ -0.23
LCN2-205ENST00000487719 SETD1AO15047 1707 aaKnown RBP13.64□□□□□ -0.23
LCN2-205ENST00000487719 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
LCN2-205ENST00000487719 MSH6P52701 1360 aa13.63□□□□□ -0.23
LCN2-205ENST00000487719 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
LCN2-205ENST00000487719 ALKQ9UM73 1620 aa13.63□□□□□ -0.23
LCN2-205ENST00000487719 MYOM2P54296 1465 aa13.61□□□□□ -0.23
LCN2-205ENST00000487719 AMOTL2Q9Y2J4 779 aa13.61□□□□□ -0.23
LCN2-205ENST00000487719 NCOA3Q9Y6Q9 1424 aa13.61□□□□□ -0.23
LCN2-205ENST00000487719 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
LCN2-205ENST00000487719 PIP4K2BP78356 416 aa13.59□□□□□ -0.23
LCN2-205ENST00000487719 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
LCN2-205ENST00000487719 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
LCN2-205ENST00000487719 METP08581 1390 aa13.58□□□□□ -0.24
LCN2-205ENST00000487719 PIK3C2GO75747 1445 aa13.57□□□□□ -0.24
LCN2-205ENST00000487719 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
LCN2-205ENST00000487719 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
LCN2-205ENST00000487719 ATF3P18847 181 aa13.56□□□□□ -0.24
LCN2-205ENST00000487719 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
LCN2-205ENST00000487719 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
LCN2-205ENST00000487719 DCAF11Q8TEB1 546 aa13.55□□□□□ -0.24
LCN2-205ENST00000487719 NALCNQ8IZF0 1738 aa13.55□□□□□ -0.24
LCN2-205ENST00000487719 ROBO1Q9Y6N7 1651 aa13.54□□□□□ -0.24
LCN2-205ENST00000487719 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
LCN2-205ENST00000487719 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
LCN2-205ENST00000487719 DCCP43146 1447 aa13.54□□□□□ -0.24
LCN2-205ENST00000487719 NRXN1Q9ULB1 1477 aa13.54□□□□□ -0.24
LCN2-205ENST00000487719 KIAA1210Q9ULL0 1709 aa13.53□□□□□ -0.24
LCN2-205ENST00000487719 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
LCN2-205ENST00000487719 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
LCN2-205ENST00000487719 PRAG1Q86YV5 1406 aa13.52□□□□□ -0.25
LCN2-205ENST00000487719 ADGRL3Q9HAR2 1447 aa13.52□□□□□ -0.25
LCN2-205ENST00000487719 PHLPP1O60346 1717 aa13.5□□□□□ -0.25
LCN2-205ENST00000487719 YTHDC2Q9H6S0 1430 aaKnown RBP13.5□□□□□ -0.25
LCN2-205ENST00000487719 LRPPRCP42704 1394 aaKnown RBP13.5□□□□□ -0.25
LCN2-205ENST00000487719 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
LCN2-205ENST00000487719 STK26Q9P289 416 aa13.5□□□□□ -0.25
LCN2-205ENST00000487719 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
LCN2-205ENST00000487719 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
LCN2-205ENST00000487719 TECPR2O15040 1411 aa13.48□□□□□ -0.25
LCN2-205ENST00000487719 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
LCN2-205ENST00000487719 ABCC11Q96J66 1382 aa13.47□□□□□ -0.25
LCN2-205ENST00000487719 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
LCN2-205ENST00000487719 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
LCN2-205ENST00000487719 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
LCN2-205ENST00000487719 TMEM132EQ6IEE7 984 aa13.47□□□□□ -0.25
LCN2-205ENST00000487719 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
LCN2-205ENST00000487719 HSPA1LP34931 641 aa13.46□□□□□ -0.25
LCN2-205ENST00000487719 DLC1Q96QB1 1528 aa13.45□□□□□ -0.26
LCN2-205ENST00000487719 PCGF6Q9BYE7 350 aa13.45□□□□□ -0.26
LCN2-205ENST00000487719 POGKQ9P215 609 aa13.45□□□□□ -0.26
LCN2-205ENST00000487719 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
LCN2-205ENST00000487719 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
LCN2-205ENST00000487719 ADGRB1O14514 1584 aa13.43□□□□□ -0.26
LCN2-205ENST00000487719 SIRT1Q96EB6 747 aa13.43□□□□□ -0.26
LCN2-205ENST00000487719 FMN2Q9NZ56 1722 aa13.43□□□□□ -0.26
LCN2-205ENST00000487719 MST1RQ04912 1400 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms