RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 HMOX1P09601 288 aa17.18■□□□□ 0.34
TFAM-204ENST00000487519 PDE4AP27815 886 aa17.18■□□□□ 0.34
TFAM-204ENST00000487519 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
TFAM-204ENST00000487519 MCTP1Q6DN14 999 aa17.18■□□□□ 0.34
TFAM-204ENST00000487519 PRM3Q9NNZ6 103 aa17.18■□□□□ 0.34
TFAM-204ENST00000487519 APPP05067 770 aa17.17■□□□□ 0.34
TFAM-204ENST00000487519 IFIT2P09913 472 aaKnown RBP17.17■□□□□ 0.34
TFAM-204ENST00000487519 GGNBP2Q9H3C7 697 aa17.17■□□□□ 0.34
TFAM-204ENST00000487519 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
TFAM-204ENST00000487519 PHF14O94880 888 aa17.16■□□□□ 0.34
TFAM-204ENST00000487519 DDX19BQ9UMR2 479 aa17.15■□□□□ 0.34
TFAM-204ENST00000487519 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
TFAM-204ENST00000487519 TMEM132EQ6IEE7 984 aa17.15■□□□□ 0.34
TFAM-204ENST00000487519 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
TFAM-204ENST00000487519 ZBED9Q6R2W3 1325 aa17.15■□□□□ 0.34
TFAM-204ENST00000487519 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
TFAM-204ENST00000487519 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
TFAM-204ENST00000487519 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.34
TFAM-204ENST00000487519 TPD52L1Q16890 204 aaPredicted RBP17.14■□□□□ 0.34
TFAM-204ENST00000487519 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.34
TFAM-204ENST00000487519 NOL10Q9BSC4 688 aaKnown RBP17.14■□□□□ 0.33
TFAM-204ENST00000487519 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
TFAM-204ENST00000487519 TPM3P06753 285 aa17.14■□□□□ 0.33
TFAM-204ENST00000487519 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
TFAM-204ENST00000487519 CEP89Q96ST8 783 aa17.14■□□□□ 0.33
TFAM-204ENST00000487519 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
TFAM-204ENST00000487519 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
TFAM-204ENST00000487519 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
TFAM-204ENST00000487519 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
TFAM-204ENST00000487519 A0A0U1RQG5 324 aaPredicted RBP17.13■□□□□ 0.33
TFAM-204ENST00000487519 ZKSCAN1P17029 563 aaPredicted RBP17.13■□□□□ 0.33
TFAM-204ENST00000487519 LRRFIP1Q32MZ4 808 aaKnown RBP17.13■□□□□ 0.33
TFAM-204ENST00000487519 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
TFAM-204ENST00000487519 ATF3P18847 181 aa17.13■□□□□ 0.33
TFAM-204ENST00000487519 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
TFAM-204ENST00000487519 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
TFAM-204ENST00000487519 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
TFAM-204ENST00000487519 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
TFAM-204ENST00000487519 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
TFAM-204ENST00000487519 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
TFAM-204ENST00000487519 AIMP1Q12904 312 aaKnown RBP17.11■□□□□ 0.33
TFAM-204ENST00000487519 DDX11L8A8MPP1 907 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
TFAM-204ENST00000487519 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 ATP6V1DQ9Y5K8 247 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 IGF1RP08069 1367 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 REC8O95072 547 aa17.11■□□□□ 0.33
TFAM-204ENST00000487519 BECN2A8MW95 431 aa17.1■□□□□ 0.33
TFAM-204ENST00000487519 CPLX1O14810 134 aa17.1■□□□□ 0.33
TFAM-204ENST00000487519 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
TFAM-204ENST00000487519 NLRP6P59044 892 aa17.09■□□□□ 0.33
TFAM-204ENST00000487519 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
TFAM-204ENST00000487519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
TFAM-204ENST00000487519 KLHL34Q8N239 644 aa17.09■□□□□ 0.33
TFAM-204ENST00000487519 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.33
TFAM-204ENST00000487519 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.33
TFAM-204ENST00000487519 GNAI1P63096 354 aa17.08■□□□□ 0.33
TFAM-204ENST00000487519 AFAP1Q8N556 730 aa17.08■□□□□ 0.32
TFAM-204ENST00000487519 TRIM29Q14134 588 aa17.07■□□□□ 0.32
TFAM-204ENST00000487519 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
TFAM-204ENST00000487519 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
TFAM-204ENST00000487519 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
TFAM-204ENST00000487519 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
TFAM-204ENST00000487519 KIF7Q2M1P5 1343 aa17.07■□□□□ 0.32
TFAM-204ENST00000487519 TRDNQ13061 729 aa17.07■□□□□ 0.32
TFAM-204ENST00000487519 TCEAL9Q9UHQ7 104 aa17.07■□□□□ 0.32
TFAM-204ENST00000487519 NEUROD6Q96NK8 337 aa17.06■□□□□ 0.32
TFAM-204ENST00000487519 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
TFAM-204ENST00000487519 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
TFAM-204ENST00000487519 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
TFAM-204ENST00000487519 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.326e-10■■■■■ 33.6
TFAM-204ENST00000487519 GOLGA6L1Q8N7Z2 621 aa17.05■□□□□ 0.32
TFAM-204ENST00000487519 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
TFAM-204ENST00000487519 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
TFAM-204ENST00000487519 CCAR2Q8N163 923 aaKnown RBP17.04■□□□□ 0.32
TFAM-204ENST00000487519 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
TFAM-204ENST00000487519 FOSBP53539 338 aa17.03■□□□□ 0.32
TFAM-204ENST00000487519 CFAP70Q5T0N1 1121 aa17.03■□□□□ 0.32
TFAM-204ENST00000487519 RNF20Q5VTR2 975 aa17.03■□□□□ 0.32
TFAM-204ENST00000487519 ROCK1Q13464 1354 aa17.03■□□□□ 0.32
TFAM-204ENST00000487519 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
TFAM-204ENST00000487519 VPS37CA5D8V6 355 aaPredicted RBP17.02■□□□□ 0.32
TFAM-204ENST00000487519 MTHFSP49914 203 aa17.02■□□□□ 0.32
TFAM-204ENST00000487519 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
TFAM-204ENST00000487519 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
TFAM-204ENST00000487519 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
TFAM-204ENST00000487519 FAM177BA6PVY3 158 aa17.01■□□□□ 0.31
TFAM-204ENST00000487519 FYB1O15117 783 aa17■□□□□ 0.31
TFAM-204ENST00000487519 WASHC4Q2M389 1173 aa17■□□□□ 0.31
TFAM-204ENST00000487519 ABTB2Q8N961 1025 aa17■□□□□ 0.31
TFAM-204ENST00000487519 MIA2Q96PC5 1412 aa17■□□□□ 0.31
TFAM-204ENST00000487519 TPM1P09493 284 aa16.99■□□□□ 0.31
TFAM-204ENST00000487519 HSP90AB4PQ58FF6 505 aa16.99■□□□□ 0.31
TFAM-204ENST00000487519 ESCO1Q5FWF5 840 aa16.99■□□□□ 0.31
TFAM-204ENST00000487519 PCMTD1Q96MG8 357 aaPredicted RBP16.99■□□□□ 0.31
TFAM-204ENST00000487519 TPM2P07951 284 aa16.99■□□□□ 0.31
TFAM-204ENST00000487519 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms