RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PPP1R15AO75807 674 aaPredicted RBP17.22■□□□□ 0.35
SPEN-205ENST00000487496 BCANQ96GW7 911 aa17.22■□□□□ 0.35
SPEN-205ENST00000487496 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPEN-205ENST00000487496 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
SPEN-205ENST00000487496 PLEKHG1Q9ULL1 1385 aa17.2■□□□□ 0.34
SPEN-205ENST00000487496 KCNA6P17658 529 aa17.2■□□□□ 0.34
SPEN-205ENST00000487496 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
SPEN-205ENST00000487496 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
SPEN-205ENST00000487496 NUTM2DQ5VT03 806 aaPredicted RBP17.19■□□□□ 0.34
SPEN-205ENST00000487496 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
SPEN-205ENST00000487496 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
SPEN-205ENST00000487496 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
SPEN-205ENST00000487496 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
SPEN-205ENST00000487496 TRPM2O94759 1503 aa17.14■□□□□ 0.33
SPEN-205ENST00000487496 ALKQ9UM73 1620 aa17.14■□□□□ 0.33
SPEN-205ENST00000487496 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
SPEN-205ENST00000487496 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
SPEN-205ENST00000487496 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
SPEN-205ENST00000487496 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
SPEN-205ENST00000487496 CLTCL1P53675 1640 aa17.12■□□□□ 0.33
SPEN-205ENST00000487496 HSPA1LP34931 641 aa17.11■□□□□ 0.33
SPEN-205ENST00000487496 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
SPEN-205ENST00000487496 NWD1Q149M9 1564 aa17.11■□□□□ 0.33
SPEN-205ENST00000487496 FOXD1Q16676 465 aa17.1■□□□□ 0.33
SPEN-205ENST00000487496 NKTRP30414 1462 aaKnown RBP17.1■□□□□ 0.33
SPEN-205ENST00000487496 XIRP1Q702N8 1843 aaKnown RBP17.1■□□□□ 0.33
SPEN-205ENST00000487496 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
SPEN-205ENST00000487496 SETD5Q9C0A6 1442 aa17.08■□□□□ 0.32
SPEN-205ENST00000487496 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
SPEN-205ENST00000487496 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
SPEN-205ENST00000487496 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
SPEN-205ENST00000487496 CHD2O14647 1828 aaKnown RBP17.06■□□□□ 0.32
SPEN-205ENST00000487496 NEXMIFQ5QGS0 1516 aa17.05■□□□□ 0.32
SPEN-205ENST00000487496 KIF1BO60333 1816 aa17.04■□□□□ 0.32
SPEN-205ENST00000487496 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
SPEN-205ENST00000487496 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
SPEN-205ENST00000487496 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
SPEN-205ENST00000487496 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
SPEN-205ENST00000487496 MSH6P52701 1360 aa17.02■□□□□ 0.32
SPEN-205ENST00000487496 RPGRIP1LQ68CZ1 1315 aa17.02■□□□□ 0.32
SPEN-205ENST00000487496 PTPRUQ92729 1446 aa17.02■□□□□ 0.31
SPEN-205ENST00000487496 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
SPEN-205ENST00000487496 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
SPEN-205ENST00000487496 CCDC144AA2RUR9 1427 aa17.01■□□□□ 0.31
SPEN-205ENST00000487496 FAM135BQ49AJ0 1406 aa17■□□□□ 0.31
SPEN-205ENST00000487496 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
SPEN-205ENST00000487496 METP08581 1390 aa17■□□□□ 0.31
SPEN-205ENST00000487496 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
SPEN-205ENST00000487496 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
SPEN-205ENST00000487496 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
SPEN-205ENST00000487496 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
SPEN-205ENST00000487496 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.3
SPEN-205ENST00000487496 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
SPEN-205ENST00000487496 HRCP23327 699 aa16.94■□□□□ 0.3
SPEN-205ENST00000487496 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
SPEN-205ENST00000487496 ATF3P18847 181 aa16.93■□□□□ 0.3
SPEN-205ENST00000487496 PPLO60437 1756 aa16.92■□□□□ 0.3
SPEN-205ENST00000487496 ADGRF5Q8IZF2 1346 aa16.92■□□□□ 0.3
SPEN-205ENST00000487496 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
SPEN-205ENST00000487496 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
SPEN-205ENST00000487496 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
SPEN-205ENST00000487496 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
SPEN-205ENST00000487496 SETD1AO15047 1707 aaKnown RBP16.88■□□□□ 0.29
SPEN-205ENST00000487496 MED1Q15648 1581 aaPredicted RBP16.88■□□□□ 0.29
SPEN-205ENST00000487496 DCCP43146 1447 aa16.87■□□□□ 0.29
SPEN-205ENST00000487496 ROBO2Q9HCK4 1378 aa16.87■□□□□ 0.29
SPEN-205ENST00000487496 PTCH1Q13635 1447 aa16.86■□□□□ 0.29
SPEN-205ENST00000487496 ADGRL3Q9HAR2 1447 aa16.86■□□□□ 0.29
SPEN-205ENST00000487496 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
SPEN-205ENST00000487496 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
SPEN-205ENST00000487496 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
SPEN-205ENST00000487496 BRINP3Q76B58 766 aa16.83■□□□□ 0.28
SPEN-205ENST00000487496 MST1RQ04912 1400 aa16.82■□□□□ 0.28
SPEN-205ENST00000487496 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
SPEN-205ENST00000487496 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
SPEN-205ENST00000487496 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
SPEN-205ENST00000487496 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
SPEN-205ENST00000487496 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
SPEN-205ENST00000487496 STK26Q9P289 416 aa16.8■□□□□ 0.28
SPEN-205ENST00000487496 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
SPEN-205ENST00000487496 NALCNQ8IZF0 1738 aa16.79■□□□□ 0.28
SPEN-205ENST00000487496 MYOM2P54296 1465 aa16.79■□□□□ 0.28
SPEN-205ENST00000487496 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
SPEN-205ENST00000487496 JCADQ9P266 1359 aa16.78■□□□□ 0.28
SPEN-205ENST00000487496 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
SPEN-205ENST00000487496 ASXL1Q8IXJ9 1541 aa16.78■□□□□ 0.28
SPEN-205ENST00000487496 TECPR2O15040 1411 aa16.78■□□□□ 0.28
SPEN-205ENST00000487496 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
SPEN-205ENST00000487496 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
SPEN-205ENST00000487496 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.28
SPEN-205ENST00000487496 YTHDC2Q9H6S0 1430 aaKnown RBP16.76■□□□□ 0.27
SPEN-205ENST00000487496 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
SPEN-205ENST00000487496 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
SPEN-205ENST00000487496 SOCS7O14512 581 aa16.74■□□□□ 0.27
SPEN-205ENST00000487496 RGS17Q9UGC6 210 aaPredicted RBP16.74■□□□□ 0.27
SPEN-205ENST00000487496 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
SPEN-205ENST00000487496 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
SPEN-205ENST00000487496 DDX17Q92841 729 aaKnown RBP16.73■□□□□ 0.27
SPEN-205ENST00000487496 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
SPEN-205ENST00000487496 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms