RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
HOXA9-204ENST00000487384 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
HOXA9-204ENST00000487384 SLAIN2Q9P270 581 aa13.17□□□□□ -0.3
HOXA9-204ENST00000487384 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
HOXA9-204ENST00000487384 NOS1P29475 1434 aa13.16□□□□□ -0.3
HOXA9-204ENST00000487384 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
HOXA9-204ENST00000487384 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.3
HOXA9-204ENST00000487384 FGD6Q6ZV73 1430 aa13.14□□□□□ -0.31
HOXA9-204ENST00000487384 APLP2Q06481 763 aa13.14□□□□□ -0.31
HOXA9-204ENST00000487384 JCADQ9P266 1359 aa13.14□□□□□ -0.31
HOXA9-204ENST00000487384 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
HOXA9-204ENST00000487384 PPP1R15AO75807 674 aaPredicted RBP13.13□□□□□ -0.31
HOXA9-204ENST00000487384 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
HOXA9-204ENST00000487384 C14orf37Q86TY3 774 aa13.12□□□□□ -0.31
HOXA9-204ENST00000487384 MEX3CQ5U5Q3 659 aaKnown RBP13.11□□□□□ -0.31
HOXA9-204ENST00000487384 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
HOXA9-204ENST00000487384 ZFYVE9O95405 1425 aa13.11□□□□□ -0.31
HOXA9-204ENST00000487384 RIMS2Q9UQ26 1411 aa13.11□□□□□ -0.31
HOXA9-204ENST00000487384 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
HOXA9-204ENST00000487384 TMEM131LA2VDJ0 1609 aa13.1□□□□□ -0.31
HOXA9-204ENST00000487384 LRP6O75581 1613 aa13.1□□□□□ -0.31
HOXA9-204ENST00000487384 PLEKHG1Q9ULL1 1385 aa13.1□□□□□ -0.31
HOXA9-204ENST00000487384 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
HOXA9-204ENST00000487384 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
HOXA9-204ENST00000487384 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
HOXA9-204ENST00000487384 RPRD2Q5VT52 1461 aaKnown RBP13.08□□□□□ -0.32
HOXA9-204ENST00000487384 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
HOXA9-204ENST00000487384 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
HOXA9-204ENST00000487384 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
HOXA9-204ENST00000487384 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
HOXA9-204ENST00000487384 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
HOXA9-204ENST00000487384 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
HOXA9-204ENST00000487384 TBX22Q9Y458 520 aa13.06□□□□□ -0.32
HOXA9-204ENST00000487384 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
HOXA9-204ENST00000487384 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
HOXA9-204ENST00000487384 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
HOXA9-204ENST00000487384 ATF3P18847 181 aa13.05□□□□□ -0.32
HOXA9-204ENST00000487384 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
HOXA9-204ENST00000487384 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
HOXA9-204ENST00000487384 AHDC1Q5TGY3 1603 aaPredicted RBP13.05□□□□□ -0.32
HOXA9-204ENST00000487384 E9PCH4 1651 aa13.05□□□□□ -0.32
HOXA9-204ENST00000487384 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
HOXA9-204ENST00000487384 C19orf44Q9H6X5 657 aa13.04□□□□□ -0.32
HOXA9-204ENST00000487384 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
HOXA9-204ENST00000487384 PIAS4Q8N2W9 510 aaPredicted RBP13.03□□□□□ -0.32
HOXA9-204ENST00000487384 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
HOXA9-204ENST00000487384 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
HOXA9-204ENST00000487384 DIP2AQ14689 1571 aa13.02□□□□□ -0.33
HOXA9-204ENST00000487384 RXRBP28702 533 aa13.01□□□□□ -0.33
HOXA9-204ENST00000487384 BRINP3Q76B58 766 aa13.01□□□□□ -0.33
HOXA9-204ENST00000487384 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
HOXA9-204ENST00000487384 UNC13BO14795 1591 aa13.01□□□□□ -0.33
HOXA9-204ENST00000487384 TRPM2O94759 1503 aa13□□□□□ -0.33
HOXA9-204ENST00000487384 PTPRUQ92729 1446 aa13□□□□□ -0.33
HOXA9-204ENST00000487384 AFF2P51816 1311 aa12.99□□□□□ -0.33
HOXA9-204ENST00000487384 PIK3R4Q99570 1358 aa12.98□□□□□ -0.33
HOXA9-204ENST00000487384 IQGAP3Q86VI3 1631 aa12.98□□□□□ -0.33
HOXA9-204ENST00000487384 NHSL1Q5SYE7 1610 aa12.97□□□□□ -0.33
HOXA9-204ENST00000487384 ASXL1Q8IXJ9 1541 aa12.97□□□□□ -0.33
HOXA9-204ENST00000487384 NRXN3Q9Y4C0 1643 aa12.96□□□□□ -0.33
HOXA9-204ENST00000487384 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
HOXA9-204ENST00000487384 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.34
HOXA9-204ENST00000487384 C8orf37Q96NL8 207 aa12.95□□□□□ -0.34
HOXA9-204ENST00000487384 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
HOXA9-204ENST00000487384 MST1RQ04912 1400 aa12.94□□□□□ -0.34
HOXA9-204ENST00000487384 NUP155O75694 1391 aa12.94□□□□□ -0.34
HOXA9-204ENST00000487384 EP400Q96L91 3159 aa12.93□□□□□ -0.34
HOXA9-204ENST00000487384 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
HOXA9-204ENST00000487384 QTRT2Q9H974 415 aaKnown RBP12.93□□□□□ -0.34
HOXA9-204ENST00000487384 DCCP43146 1447 aa12.93□□□□□ -0.34
HOXA9-204ENST00000487384 SETD5Q9C0A6 1442 aa12.93□□□□□ -0.34
HOXA9-204ENST00000487384 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
HOXA9-204ENST00000487384 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
HOXA9-204ENST00000487384 RGS12O14924 1447 aa12.92□□□□□ -0.34
HOXA9-204ENST00000487384 ITGAEP38570 1179 aa12.92□□□□□ -0.34
HOXA9-204ENST00000487384 LRRC59Q96AG4 307 aaKnown RBP12.92□□□□□ -0.34
HOXA9-204ENST00000487384 METP08581 1390 aa12.92□□□□□ -0.34
HOXA9-204ENST00000487384 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
HOXA9-204ENST00000487384 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
HOXA9-204ENST00000487384 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
HOXA9-204ENST00000487384 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
HOXA9-204ENST00000487384 NGLY1Q96IV0 654 aa12.89□□□□□ -0.35
HOXA9-204ENST00000487384 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
HOXA9-204ENST00000487384 ADGRL3Q9HAR2 1447 aa12.88□□□□□ -0.35
HOXA9-204ENST00000487384 KIF1BO60333 1816 aa12.87□□□□□ -0.35
HOXA9-204ENST00000487384 CLTCL1P53675 1640 aa12.86□□□□□ -0.35
HOXA9-204ENST00000487384 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
HOXA9-204ENST00000487384 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
HOXA9-204ENST00000487384 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
HOXA9-204ENST00000487384 USP21Q9UK80 565 aa12.84□□□□□ -0.35
HOXA9-204ENST00000487384 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
HOXA9-204ENST00000487384 ATAD2Q6PL18 1390 aa12.82□□□□□ -0.36
HOXA9-204ENST00000487384 LAMC1P11047 1609 aa12.82□□□□□ -0.36
HOXA9-204ENST00000487384 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
HOXA9-204ENST00000487384 TRPC5Q9UL62 973 aaPredicted RBP12.8□□□□□ -0.36
HOXA9-204ENST00000487384 SOS2Q07890 1332 aaPredicted RBP12.8□□□□□ -0.36
HOXA9-204ENST00000487384 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
HOXA9-204ENST00000487384 KCNA4P22459 653 aa12.79□□□□□ -0.36
HOXA9-204ENST00000487384 PTCH1Q13635 1447 aa12.79□□□□□ -0.36
HOXA9-204ENST00000487384 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms