RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 ZFYVE9O95405 1425 aa25.06■■□□□ 1.6
SRRT-212ENST00000487311 RPRD2Q5VT52 1461 aaKnown RBP25.06■■□□□ 1.6
SRRT-212ENST00000487311 MYO5BQ9ULV0 1848 aa25.04■■□□□ 1.6
SRRT-212ENST00000487311 RIMS2Q9UQ26 1411 aa25.03■■□□□ 1.6
SRRT-212ENST00000487311 NUTM2DQ5VT03 806 aaPredicted RBP25.02■■□□□ 1.6
SRRT-212ENST00000487311 PLEKHG1Q9ULL1 1385 aa25.01■■□□□ 1.59
SRRT-212ENST00000487311 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
SRRT-212ENST00000487311 ROBO1Q9Y6N7 1651 aa25.01■■□□□ 1.59
SRRT-212ENST00000487311 CHGAP10645 457 aaKnown RBP25■■□□□ 1.59
SRRT-212ENST00000487311 TMEM131LA2VDJ0 1609 aa25■■□□□ 1.59
SRRT-212ENST00000487311 PPP1R15AO75807 674 aaPredicted RBP24.99■■□□□ 1.59
SRRT-212ENST00000487311 NKTRP30414 1462 aaKnown RBP24.99■■□□□ 1.59
SRRT-212ENST00000487311 SLAIN2Q9P270 581 aa24.99■■□□□ 1.59
SRRT-212ENST00000487311 HDGFP51858 240 aaKnown RBP24.98■■□□□ 1.59
SRRT-212ENST00000487311 POTEAQ6S8J7 498 aa24.98■■□□□ 1.59
SRRT-212ENST00000487311 TBX22Q9Y458 520 aa24.98■■□□□ 1.59
SRRT-212ENST00000487311 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
SRRT-212ENST00000487311 MSH6P52701 1360 aa24.96■■□□□ 1.59
SRRT-212ENST00000487311 CHD2O14647 1828 aaKnown RBP24.96■■□□□ 1.59
SRRT-212ENST00000487311 UNC13BO14795 1591 aa24.95■■□□□ 1.58
SRRT-212ENST00000487311 E9PCH4 1651 aa24.94■■□□□ 1.58
SRRT-212ENST00000487311 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
SRRT-212ENST00000487311 ITGAEP38570 1179 aa24.93■■□□□ 1.58
SRRT-212ENST00000487311 PPARGC1BQ86YN6 1023 aaKnown RBP24.93■■□□□ 1.58
SRRT-212ENST00000487311 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
SRRT-212ENST00000487311 ADAMTS13Q76LX8 1427 aa24.92■■□□□ 1.58
SRRT-212ENST00000487311 NUP155O75694 1391 aa24.9■■□□□ 1.58
SRRT-212ENST00000487311 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
SRRT-212ENST00000487311 PHLPP1O60346 1717 aa24.84■■□□□ 1.57
SRRT-212ENST00000487311 C14orf37Q86TY3 774 aa24.84■■□□□ 1.57
SRRT-212ENST00000487311 NCOA3Q9Y6Q9 1424 aa24.84■■□□□ 1.57
SRRT-212ENST00000487311 C19orf44Q9H6X5 657 aa24.83■■□□□ 1.57
SRRT-212ENST00000487311 AMOTL2Q9Y2J4 779 aa24.83■■□□□ 1.57
SRRT-212ENST00000487311 PTPRUQ92729 1446 aa24.83■■□□□ 1.57
SRRT-212ENST00000487311 JCADQ9P266 1359 aa24.82■■□□□ 1.56
SRRT-212ENST00000487311 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
SRRT-212ENST00000487311 CADPS2Q86UW7 1296 aa24.79■■□□□ 1.56
SRRT-212ENST00000487311 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.78■■□□□ 1.56
SRRT-212ENST00000487311 ATF3P18847 181 aa24.78■■□□□ 1.56
SRRT-212ENST00000487311 COL16A1Q07092 1604 aaPredicted RBP24.77■■□□□ 1.56
SRRT-212ENST00000487311 DIP2AQ14689 1571 aa24.76■■□□□ 1.55
SRRT-212ENST00000487311 BRINP3Q76B58 766 aa24.73■■□□□ 1.55
SRRT-212ENST00000487311 LRP6O75581 1613 aa24.72■■□□□ 1.55
SRRT-212ENST00000487311 TRPM2O94759 1503 aa24.72■■□□□ 1.55
SRRT-212ENST00000487311 ZNF326Q5BKZ1 582 aaKnown RBP24.72■■□□□ 1.55
SRRT-212ENST00000487311 METP08581 1390 aa24.71■■□□□ 1.55
SRRT-212ENST00000487311 NRXN3Q9Y4C0 1643 aa24.71■■□□□ 1.55
SRRT-212ENST00000487311 SPATA31A6Q5VVP1 1343 aa24.69■■□□□ 1.54
SRRT-212ENST00000487311 AHDC1Q5TGY3 1603 aaPredicted RBP24.68■■□□□ 1.54
SRRT-212ENST00000487311 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
SRRT-212ENST00000487311 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
SRRT-212ENST00000487311 MEX3CQ5U5Q3 659 aaKnown RBP24.65■■□□□ 1.54
SRRT-212ENST00000487311 SETD1AO15047 1707 aaKnown RBP24.64■■□□□ 1.54
SRRT-212ENST00000487311 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.53
SRRT-212ENST00000487311 NUTM2BA6NNL0 878 aaPredicted RBP24.62■■□□□ 1.53
SRRT-212ENST00000487311 NUTM2EB1AL46 878 aaPredicted RBP24.62■■□□□ 1.53
SRRT-212ENST00000487311 NUTM2AQ8IVF1 878 aaPredicted RBP24.62■■□□□ 1.53
SRRT-212ENST00000487311 DDX17Q92841 729 aaKnown RBP24.62■■□□□ 1.53
SRRT-212ENST00000487311 MST1RQ04912 1400 aa24.61■■□□□ 1.53
SRRT-212ENST00000487311 CLTCL1P53675 1640 aa24.61■■□□□ 1.53
SRRT-212ENST00000487311 DCCP43146 1447 aa24.61■■□□□ 1.53
SRRT-212ENST00000487311 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
SRRT-212ENST00000487311 ZNF772Q68DY9 489 aaPredicted RBP24.6■■□□□ 1.53
SRRT-212ENST00000487311 NAIPQ13075 1403 aa24.6■■□□□ 1.53
SRRT-212ENST00000487311 NEXMIFQ5QGS0 1516 aa24.59■■□□□ 1.53
SRRT-212ENST00000487311 ASXL1Q8IXJ9 1541 aa24.58■■□□□ 1.53
SRRT-212ENST00000487311 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
SRRT-212ENST00000487311 RRBP1Q9P2E9 1410 aaKnown RBP24.58■■□□□ 1.53
SRRT-212ENST00000487311 SETD5Q9C0A6 1442 aa24.55■■□□□ 1.52
SRRT-212ENST00000487311 ADGRL3Q9HAR2 1447 aa24.53■■□□□ 1.52
SRRT-212ENST00000487311 UPF1Q92900 1129 aaKnown RBP eCLIP24.53■■□□□ 1.52
SRRT-212ENST00000487311 LRRC59Q96AG4 307 aaKnown RBP24.53■■□□□ 1.52
SRRT-212ENST00000487311 RXRBP28702 533 aa24.52■■□□□ 1.52
SRRT-212ENST00000487311 NHSL1Q5SYE7 1610 aa24.5■■□□□ 1.51
SRRT-212ENST00000487311 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
SRRT-212ENST00000487311 AFF2P51816 1311 aa24.5■■□□□ 1.51
SRRT-212ENST00000487311 KIF1BO60333 1816 aa24.49■■□□□ 1.51
SRRT-212ENST00000487311 NALCNQ8IZF0 1738 aa24.49■■□□□ 1.51
SRRT-212ENST00000487311 ROBO2Q9HCK4 1378 aa24.48■■□□□ 1.51
SRRT-212ENST00000487311 C1orf167Q5SNV9 1468 aa24.47■■□□□ 1.51
SRRT-212ENST00000487311 ORAI2Q96SN7 254 aa24.47■■□□□ 1.51
SRRT-212ENST00000487311 PNPLA6Q8IY17 1366 aa24.46■■□□□ 1.51
SRRT-212ENST00000487311 SLC4A1APQ9BWU0 796 aaKnown RBP24.46■■□□□ 1.51
SRRT-212ENST00000487311 FOXD1Q16676 465 aa24.45■■□□□ 1.5
SRRT-212ENST00000487311 C8orf37Q96NL8 207 aa24.45■■□□□ 1.5
SRRT-212ENST00000487311 RPGRIP1LQ68CZ1 1315 aa24.43■■□□□ 1.5
SRRT-212ENST00000487311 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
SRRT-212ENST00000487311 HFM1A2PYH4 1435 aa24.43■■□□□ 1.5
SRRT-212ENST00000487311 PTCH1Q13635 1447 aa24.41■■□□□ 1.5
SRRT-212ENST00000487311 ADAMTS2O95450 1211 aa24.4■■□□□ 1.5
SRRT-212ENST00000487311 SOS2Q07890 1332 aaPredicted RBP24.39■■□□□ 1.5
SRRT-212ENST00000487311 CDK12Q9NYV4 1490 aaPredicted RBP24.38■■□□□ 1.49
SRRT-212ENST00000487311 ADGRF5Q8IZF2 1346 aa24.36■■□□□ 1.49
SRRT-212ENST00000487311 NGLY1Q96IV0 654 aa24.36■■□□□ 1.49
SRRT-212ENST00000487311 RBM6P78332 1123 aaKnown RBP24.35■■□□□ 1.49
SRRT-212ENST00000487311 PRAG1Q86YV5 1406 aa24.35■■□□□ 1.49
SRRT-212ENST00000487311 PPLO60437 1756 aa24.34■■□□□ 1.49
SRRT-212ENST00000487311 RGL3Q3MIN7 710 aa24.34■■□□□ 1.49
SRRT-212ENST00000487311 LAMC1P11047 1609 aa24.34■■□□□ 1.49
SRRT-212ENST00000487311 RGS12O14924 1447 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms