RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ABCA6Q8N139 1617 aa22.9■■□□□ 1.26
FDPS-212ENST00000487002 MROH2AA6NES4 1674 aa22.89■■□□□ 1.26
FDPS-212ENST00000487002 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
FDPS-212ENST00000487002 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
FDPS-212ENST00000487002 NRXN1Q9ULB1 1477 aa22.87■■□□□ 1.25
FDPS-212ENST00000487002 CDCA8Q53HL2 280 aa22.87■■□□□ 1.25
FDPS-212ENST00000487002 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
FDPS-212ENST00000487002 KDM5AP29375 1690 aaKnown RBP22.85■■□□□ 1.25
FDPS-212ENST00000487002 MYOM1P52179 1685 aa22.85■■□□□ 1.25
FDPS-212ENST00000487002 PANK3Q9H999 370 aa22.84■■□□□ 1.25
FDPS-212ENST00000487002 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
FDPS-212ENST00000487002 MYO3AQ8NEV4 1616 aa22.83■■□□□ 1.25
FDPS-212ENST00000487002 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
FDPS-212ENST00000487002 SLC24A1O60721 1099 aa22.82■■□□□ 1.24
FDPS-212ENST00000487002 SETBP1Q9Y6X0 1596 aa22.81■■□□□ 1.24
FDPS-212ENST00000487002 ABCC3O15438 1527 aa22.8■■□□□ 1.24
FDPS-212ENST00000487002 PPLO60437 1756 aa22.8■■□□□ 1.24
FDPS-212ENST00000487002 CAMSAP1Q5T5Y3 1602 aa22.79■■□□□ 1.24
FDPS-212ENST00000487002 NPATQ14207 1427 aa22.79■■□□□ 1.24
FDPS-212ENST00000487002 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
FDPS-212ENST00000487002 ZC3H13Q5T200 1668 aaKnown RBP22.77■■□□□ 1.24
FDPS-212ENST00000487002 RICTORQ6R327 1708 aa22.77■■□□□ 1.24
FDPS-212ENST00000487002 DIP2CQ9Y2E4 1556 aa22.77■■□□□ 1.24
FDPS-212ENST00000487002 ASXL1Q8IXJ9 1541 aa22.76■■□□□ 1.23
FDPS-212ENST00000487002 NPC1L1Q9UHC9 1359 aa22.75■■□□□ 1.23
FDPS-212ENST00000487002 CC2D1BQ5T0F9 858 aaKnown RBP22.74■■□□□ 1.23
FDPS-212ENST00000487002 SBNO2Q9Y2G9 1366 aa22.74■■□□□ 1.23
FDPS-212ENST00000487002 PDE3BQ13370 1112 aa22.74■■□□□ 1.23
FDPS-212ENST00000487002 GLI2P10070 1586 aa22.73■■□□□ 1.23
FDPS-212ENST00000487002 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
FDPS-212ENST00000487002 ADGRF5Q8IZF2 1346 aa22.72■■□□□ 1.23
FDPS-212ENST00000487002 ERVK-7P63135 1459 aa22.71■■□□□ 1.23
FDPS-212ENST00000487002 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
FDPS-212ENST00000487002 PIK3C2GO75747 1445 aa22.7■■□□□ 1.22
FDPS-212ENST00000487002 NOS1P29475 1434 aa22.7■■□□□ 1.22
FDPS-212ENST00000487002 SIGLEC1Q9BZZ2 1709 aa22.69■■□□□ 1.22
FDPS-212ENST00000487002 CFAP70Q5T0N1 1121 aa22.69■■□□□ 1.22
FDPS-212ENST00000487002 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
FDPS-212ENST00000487002 AMER1Q5JTC6 1135 aaPredicted RBP22.68■■□□□ 1.22
FDPS-212ENST00000487002 ARHGAP31Q2M1Z3 1444 aa22.68■■□□□ 1.22
FDPS-212ENST00000487002 RBM19Q9Y4C8 960 aaKnown RBP22.66■■□□□ 1.22
FDPS-212ENST00000487002 CFAP65Q6ZU64 1925 aaKnown RBP22.66■■□□□ 1.22
FDPS-212ENST00000487002 ADGRB1O14514 1584 aa22.65■■□□□ 1.22
FDPS-212ENST00000487002 GGT6Q6P531 493 aa22.64■■□□□ 1.22
FDPS-212ENST00000487002 QRICH2Q9H0J4 1663 aa22.64■■□□□ 1.21
FDPS-212ENST00000487002 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
FDPS-212ENST00000487002 MYT1Q01538 1121 aa22.62■■□□□ 1.21
FDPS-212ENST00000487002 RAPGEF3O95398 923 aa22.6■■□□□ 1.21
FDPS-212ENST00000487002 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
FDPS-212ENST00000487002 C14orf93Q9H972 538 aaKnown RBP22.6■■□□□ 1.21
FDPS-212ENST00000487002 NEXMIFQ5QGS0 1516 aa22.59■■□□□ 1.21
FDPS-212ENST00000487002 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.21
FDPS-212ENST00000487002 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
FDPS-212ENST00000487002 RRP1P56182 461 aaKnown RBP22.55■■□□□ 1.2
FDPS-212ENST00000487002 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
FDPS-212ENST00000487002 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
FDPS-212ENST00000487002 USP32Q8NFA0 1604 aa22.55■■□□□ 1.2
FDPS-212ENST00000487002 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
FDPS-212ENST00000487002 SENP3-EIF4A1A0A087X0R7 540 aa22.54■■□□□ 1.2
FDPS-212ENST00000487002 DIP2BQ9P265 1576 aa22.54■■□□□ 1.2
FDPS-212ENST00000487002 ZFYVE9O95405 1425 aa22.53■■□□□ 1.2
FDPS-212ENST00000487002 YEATS2Q9ULM3 1422 aa22.53■■□□□ 1.2
FDPS-212ENST00000487002 WDR43Q15061 677 aaKnown RBP eCLIP22.53■■□□□ 1.2
FDPS-212ENST00000487002 REREQ9P2R6 1566 aa22.52■■□□□ 1.2
FDPS-212ENST00000487002 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
FDPS-212ENST00000487002 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
FDPS-212ENST00000487002 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
FDPS-212ENST00000487002 ADAMTS8Q9UP79 889 aa22.51■■□□□ 1.19
FDPS-212ENST00000487002 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
FDPS-212ENST00000487002 VGFO15240 615 aaPredicted RBP22.49■■□□□ 1.19
FDPS-212ENST00000487002 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
FDPS-212ENST00000487002 TMEM131LA2VDJ0 1609 aa22.48■■□□□ 1.19
FDPS-212ENST00000487002 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
FDPS-212ENST00000487002 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
FDPS-212ENST00000487002 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
FDPS-212ENST00000487002 MYO5BQ9ULV0 1848 aa22.46■■□□□ 1.19
FDPS-212ENST00000487002 CDCA7LQ96GN5 454 aa22.45■■□□□ 1.18
FDPS-212ENST00000487002 CARD14Q9BXL6 1004 aa22.45■■□□□ 1.18
FDPS-212ENST00000487002 TRAK1Q9UPV9 953 aa22.45■■□□□ 1.18
FDPS-212ENST00000487002 AGLP35573 1532 aa22.44■■□□□ 1.18
FDPS-212ENST00000487002 ZNF521Q96K83 1311 aa22.44■■□□□ 1.18
FDPS-212ENST00000487002 TULP4Q9NRJ4 1543 aa22.42■■□□□ 1.18
FDPS-212ENST00000487002 NSD3Q9BZ95 1437 aa22.42■■□□□ 1.18
FDPS-212ENST00000487002 POLR3AO14802 1390 aaPredicted RBP22.41■■□□□ 1.18
FDPS-212ENST00000487002 PLEKHH1Q9ULM0 1364 aa22.41■■□□□ 1.18
FDPS-212ENST00000487002 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
FDPS-212ENST00000487002 IDI1Q13907 227 aa22.4■■□□□ 1.18
FDPS-212ENST00000487002 NGEFQ8N5V2 710 aa22.4■■□□□ 1.18
FDPS-212ENST00000487002 TMEM132EQ6IEE7 984 aa22.38■■□□□ 1.17
FDPS-212ENST00000487002 SHPRHQ149N8 1683 aa22.38■■□□□ 1.17
FDPS-212ENST00000487002 EVC2Q86UK5 1308 aa22.37■■□□□ 1.17
FDPS-212ENST00000487002 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
FDPS-212ENST00000487002 TSPOAP1O95153 1857 aa22.36■■□□□ 1.17
FDPS-212ENST00000487002 NSD2O96028 1365 aa22.36■■□□□ 1.17
FDPS-212ENST00000487002 NINLQ9Y2I6 1382 aa22.36■■□□□ 1.17
FDPS-212ENST00000487002 CLTCQ00610 1675 aaKnown RBP22.35■■□□□ 1.17
FDPS-212ENST00000487002 FAM69CQ0P6D2 419 aa22.35■■□□□ 1.17
FDPS-212ENST00000487002 EXOC6Q8TAG9 804 aa22.35■■□□□ 1.17
FDPS-212ENST00000487002 GOLGA2Q08379 1002 aa22.35■■□□□ 1.17
FDPS-212ENST00000487002 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms