RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KIDINS220Q9ULH0 1771 aa24.25■■□□□ 1.47
PDLIM7-207ENST00000486828 RNF123Q5XPI4 1314 aa24.23■■□□□ 1.47
PDLIM7-207ENST00000486828 SCAF11Q99590 1463 aaKnown RBP24.23■■□□□ 1.47
PDLIM7-207ENST00000486828 PANK3Q9H999 370 aa24.23■■□□□ 1.47
PDLIM7-207ENST00000486828 RICTORQ6R327 1708 aa24.22■■□□□ 1.47
PDLIM7-207ENST00000486828 RBM19Q9Y4C8 960 aaKnown RBP24.22■■□□□ 1.47
PDLIM7-207ENST00000486828 KIAA1210Q9ULL0 1709 aa24.21■■□□□ 1.47
PDLIM7-207ENST00000486828 EFCAB6Q5THR3 1501 aa24.21■■□□□ 1.47
PDLIM7-207ENST00000486828 FRMPD1Q5SYB0 1578 aa24.2■■□□□ 1.46
PDLIM7-207ENST00000486828 LMTK2Q8IWU2 1503 aa24.18■■□□□ 1.46
PDLIM7-207ENST00000486828 MYOM2P54296 1465 aa24.17■■□□□ 1.46
PDLIM7-207ENST00000486828 CC2D1BQ5T0F9 858 aaKnown RBP24.16■■□□□ 1.46
PDLIM7-207ENST00000486828 INSRP06213 1382 aa24.16■■□□□ 1.46
PDLIM7-207ENST00000486828 MLH3Q9UHC1 1453 aa24.16■■□□□ 1.46
PDLIM7-207ENST00000486828 ZMYM4Q5VZL5 1548 aa24.15■■□□□ 1.46
PDLIM7-207ENST00000486828 HECW2Q9P2P5 1572 aa24.14■■□□□ 1.46
PDLIM7-207ENST00000486828 KIF1BO60333 1816 aa24.14■■□□□ 1.46
PDLIM7-207ENST00000486828 SYNMO15061 1565 aa24.14■■□□□ 1.45
PDLIM7-207ENST00000486828 UGGT1Q9NYU2 1555 aa24.14■■□□□ 1.45
PDLIM7-207ENST00000486828 EIF3AQ14152 1382 aaKnown RBP24.14■■□□□ 1.45
PDLIM7-207ENST00000486828 CDCA8Q53HL2 280 aa24.14■■□□□ 1.45
PDLIM7-207ENST00000486828 SENP3-EIF4A1A0A087X0R7 540 aa24.13■■□□□ 1.45
PDLIM7-207ENST00000486828 B4GALNT3Q6L9W6 998 aa24.12■■□□□ 1.45
PDLIM7-207ENST00000486828 IFT172Q9UG01 1749 aa24.12■■□□□ 1.45
PDLIM7-207ENST00000486828 ABCA6Q8N139 1617 aa24.1■■□□□ 1.45
PDLIM7-207ENST00000486828 BLMP54132 1417 aaPredicted RBP24.09■■□□□ 1.45
PDLIM7-207ENST00000486828 PDE3BQ13370 1112 aa24.08■■□□□ 1.45
PDLIM7-207ENST00000486828 MROH2AA6NES4 1674 aa24.08■■□□□ 1.45
PDLIM7-207ENST00000486828 YEATS2Q9ULM3 1422 aa24.07■■□□□ 1.44
PDLIM7-207ENST00000486828 MYOM1P52179 1685 aa24.06■■□□□ 1.44
PDLIM7-207ENST00000486828 NRXN1Q9ULB1 1477 aa24.06■■□□□ 1.44
PDLIM7-207ENST00000486828 KNSTRNQ9Y448 316 aa24.06■■□□□ 1.44
PDLIM7-207ENST00000486828 ADGRB3O60242 1522 aa24.04■■□□□ 1.44
PDLIM7-207ENST00000486828 ADGRF5Q8IZF2 1346 aa24.04■■□□□ 1.44
PDLIM7-207ENST00000486828 KDM5AP29375 1690 aaKnown RBP24.04■■□□□ 1.44
PDLIM7-207ENST00000486828 CFAP70Q5T0N1 1121 aa24.03■■□□□ 1.44
PDLIM7-207ENST00000486828 DIP2CQ9Y2E4 1556 aa24.03■■□□□ 1.44
PDLIM7-207ENST00000486828 SLC24A1O60721 1099 aa24.02■■□□□ 1.44
PDLIM7-207ENST00000486828 AMER1Q5JTC6 1135 aaPredicted RBP24.02■■□□□ 1.44
PDLIM7-207ENST00000486828 ASXL1Q8IXJ9 1541 aa24.02■■□□□ 1.44
PDLIM7-207ENST00000486828 NPATQ14207 1427 aa24■■□□□ 1.43
PDLIM7-207ENST00000486828 NPC1L1Q9UHC9 1359 aa24■■□□□ 1.43
PDLIM7-207ENST00000486828 MYO3AQ8NEV4 1616 aa23.98■■□□□ 1.43
PDLIM7-207ENST00000486828 SALL2Q9Y467 1007 aaPredicted RBP23.98■■□□□ 1.43
PDLIM7-207ENST00000486828 ERVK-7P63135 1459 aa23.98■■□□□ 1.43
PDLIM7-207ENST00000486828 PPP2R1AP30153 589 aa23.98■■□□□ 1.43
PDLIM7-207ENST00000486828 SETBP1Q9Y6X0 1596 aa23.97■■□□□ 1.43
PDLIM7-207ENST00000486828 ARHGEF40Q8TER5 1519 aa23.97■■□□□ 1.43
PDLIM7-207ENST00000486828 RRP1P56182 461 aaKnown RBP23.96■■□□□ 1.43
PDLIM7-207ENST00000486828 RCAN3Q9UKA8 241 aa23.96■■□□□ 1.43
PDLIM7-207ENST00000486828 NOS1P29475 1434 aa23.96■■□□□ 1.43
PDLIM7-207ENST00000486828 ABCC3O15438 1527 aa23.96■■□□□ 1.43
PDLIM7-207ENST00000486828 GGT6Q6P531 493 aa23.94■■□□□ 1.42
PDLIM7-207ENST00000486828 CCDC136Q96JN2 1154 aa23.94■■□□□ 1.42
PDLIM7-207ENST00000486828 PIK3C2GO75747 1445 aa23.94■■□□□ 1.42
PDLIM7-207ENST00000486828 PPLO60437 1756 aa23.94■■□□□ 1.42
PDLIM7-207ENST00000486828 FANCIQ9NVI1 1328 aa23.94■■□□□ 1.42
PDLIM7-207ENST00000486828 SBNO2Q9Y2G9 1366 aa23.93■■□□□ 1.42
PDLIM7-207ENST00000486828 ANP32EQ9BTT0 268 aa23.92■■□□□ 1.42
PDLIM7-207ENST00000486828 CAMSAP1Q5T5Y3 1602 aa23.91■■□□□ 1.42
PDLIM7-207ENST00000486828 ADAMTS8Q9UP79 889 aa23.91■■□□□ 1.42
PDLIM7-207ENST00000486828 CDCA7LQ96GN5 454 aa23.9■■□□□ 1.42
PDLIM7-207ENST00000486828 CHGAP10645 457 aaKnown RBP23.9■■□□□ 1.42
PDLIM7-207ENST00000486828 REREQ9P2R6 1566 aa23.89■■□□□ 1.42
PDLIM7-207ENST00000486828 RPGRIP1LQ68CZ1 1315 aa23.89■■□□□ 1.41
PDLIM7-207ENST00000486828 WDR43Q15061 677 aaKnown RBP eCLIP23.88■■□□□ 1.41
PDLIM7-207ENST00000486828 CFAP65Q6ZU64 1925 aaKnown RBP23.86■■□□□ 1.41
PDLIM7-207ENST00000486828 C14orf93Q9H972 538 aaKnown RBP23.86■■□□□ 1.41
PDLIM7-207ENST00000486828 CENPJQ9HC77 1338 aaPredicted RBP23.86■■□□□ 1.41
PDLIM7-207ENST00000486828 ADGRB1O14514 1584 aa23.85■■□□□ 1.41
PDLIM7-207ENST00000486828 PIK3C2BO00750 1634 aa23.85■■□□□ 1.41
PDLIM7-207ENST00000486828 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
PDLIM7-207ENST00000486828 ZC3H13Q5T200 1668 aaKnown RBP23.84■■□□□ 1.41
PDLIM7-207ENST00000486828 AGLP35573 1532 aa23.83■■□□□ 1.41
PDLIM7-207ENST00000486828 QRICH2Q9H0J4 1663 aa23.81■■□□□ 1.4
PDLIM7-207ENST00000486828 EXOC6Q8TAG9 804 aa23.81■■□□□ 1.4
PDLIM7-207ENST00000486828 CARD14Q9BXL6 1004 aa23.81■■□□□ 1.4
PDLIM7-207ENST00000486828 ARHGAP31Q2M1Z3 1444 aa23.81■■□□□ 1.4
PDLIM7-207ENST00000486828 MSH5O43196 834 aa23.79■■□□□ 1.4
PDLIM7-207ENST00000486828 PLEKHH1Q9ULM0 1364 aa23.79■■□□□ 1.4
PDLIM7-207ENST00000486828 TRAK1Q9UPV9 953 aa23.78■■□□□ 1.4
PDLIM7-207ENST00000486828 ZNF521Q96K83 1311 aa23.77■■□□□ 1.4
PDLIM7-207ENST00000486828 NEXMIFQ5QGS0 1516 aa23.77■■□□□ 1.4
PDLIM7-207ENST00000486828 TMEM132EQ6IEE7 984 aa23.73■■□□□ 1.39
PDLIM7-207ENST00000486828 VGFO15240 615 aaPredicted RBP23.72■■□□□ 1.39
PDLIM7-207ENST00000486828 MLECQ14165 292 aa23.72■■□□□ 1.39
PDLIM7-207ENST00000486828 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
PDLIM7-207ENST00000486828 GOLGA2Q08379 1002 aa23.71■■□□□ 1.39
PDLIM7-207ENST00000486828 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
PDLIM7-207ENST00000486828 ARHGEF28Q8N1W1 1705 aaKnown RBP23.69■■□□□ 1.38
PDLIM7-207ENST00000486828 USP32Q8NFA0 1604 aa23.69■■□□□ 1.38
PDLIM7-207ENST00000486828 PLIN1O60240 522 aa23.69■■□□□ 1.38
PDLIM7-207ENST00000486828 POLR3AO14802 1390 aaPredicted RBP23.68■■□□□ 1.38
PDLIM7-207ENST00000486828 ZFYVE9O95405 1425 aa23.68■■□□□ 1.38
PDLIM7-207ENST00000486828 PUS7Q96PZ0 661 aaKnown RBP23.67■■□□□ 1.38
PDLIM7-207ENST00000486828 SLC52A1Q9NWF4 448 aa23.67■■□□□ 1.38
PDLIM7-207ENST00000486828 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
PDLIM7-207ENST00000486828 IDI1Q13907 227 aa23.67■■□□□ 1.38
PDLIM7-207ENST00000486828 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
PDLIM7-207ENST00000486828 PREX1Q8TCU6 1659 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms