RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 ROBO1Q9Y6N7 1651 aa22.33■■□□□ 1.16
SDCCAG3-211ENST00000486441 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
SDCCAG3-211ENST00000486441 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
SDCCAG3-211ENST00000486441 PLEKHG1Q9ULL1 1385 aa22.29■■□□□ 1.16
SDCCAG3-211ENST00000486441 ANKRD50Q9ULJ7 1429 aa22.29■■□□□ 1.16
SDCCAG3-211ENST00000486441 RPRD2Q5VT52 1461 aaKnown RBP22.28■■□□□ 1.16
SDCCAG3-211ENST00000486441 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
SDCCAG3-211ENST00000486441 TBX22Q9Y458 520 aa22.26■■□□□ 1.15
SDCCAG3-211ENST00000486441 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
SDCCAG3-211ENST00000486441 MSH6P52701 1360 aa22.25■■□□□ 1.15
SDCCAG3-211ENST00000486441 MYO5BQ9ULV0 1848 aa22.24■■□□□ 1.15
SDCCAG3-211ENST00000486441 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
SDCCAG3-211ENST00000486441 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
SDCCAG3-211ENST00000486441 BCANQ96GW7 911 aa22.23■■□□□ 1.15
SDCCAG3-211ENST00000486441 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
SDCCAG3-211ENST00000486441 NUTM2DQ5VT03 806 aaPredicted RBP22.19■■□□□ 1.14
SDCCAG3-211ENST00000486441 JCADQ9P266 1359 aa22.19■■□□□ 1.14
SDCCAG3-211ENST00000486441 NCOA3Q9Y6Q9 1424 aa22.19■■□□□ 1.14
SDCCAG3-211ENST00000486441 GCC2Q8IWJ2 1684 aa22.18■■□□□ 1.14
SDCCAG3-211ENST00000486441 HDGFP51858 240 aaKnown RBP22.17■■□□□ 1.14
SDCCAG3-211ENST00000486441 COL16A1Q07092 1604 aaPredicted RBP22.17■■□□□ 1.14
SDCCAG3-211ENST00000486441 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
SDCCAG3-211ENST00000486441 PHLPP1O60346 1717 aa22.16■■□□□ 1.14
SDCCAG3-211ENST00000486441 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.15■■□□□ 1.14
SDCCAG3-211ENST00000486441 UNC13BO14795 1591 aa22.15■■□□□ 1.14
SDCCAG3-211ENST00000486441 LRP6O75581 1613 aa22.14■■□□□ 1.14
SDCCAG3-211ENST00000486441 PTPRUQ92729 1446 aa22.14■■□□□ 1.13
SDCCAG3-211ENST00000486441 E9PCH4 1651 aa22.14■■□□□ 1.13
SDCCAG3-211ENST00000486441 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
SDCCAG3-211ENST00000486441 C19orf44Q9H6X5 657 aa22.13■■□□□ 1.13
SDCCAG3-211ENST00000486441 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
SDCCAG3-211ENST00000486441 ROCK1Q13464 1354 aa22.11■■□□□ 1.13
SDCCAG3-211ENST00000486441 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
SDCCAG3-211ENST00000486441 CADPS2Q86UW7 1296 aa22.09■■□□□ 1.13
SDCCAG3-211ENST00000486441 AMOTL2Q9Y2J4 779 aa22.09■■□□□ 1.13
SDCCAG3-211ENST00000486441 SETD1AO15047 1707 aaKnown RBP22.08■■□□□ 1.12
SDCCAG3-211ENST00000486441 SPATA31A6Q5VVP1 1343 aa22.07■■□□□ 1.12
SDCCAG3-211ENST00000486441 AHDC1Q5TGY3 1603 aaPredicted RBP22.07■■□□□ 1.12
SDCCAG3-211ENST00000486441 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
SDCCAG3-211ENST00000486441 BRINP3Q76B58 766 aa22.06■■□□□ 1.12
SDCCAG3-211ENST00000486441 DIP2AQ14689 1571 aa22.06■■□□□ 1.12
SDCCAG3-211ENST00000486441 NUP155O75694 1391 aa22.05■■□□□ 1.12
SDCCAG3-211ENST00000486441 C14orf37Q86TY3 774 aa22.05■■□□□ 1.12
SDCCAG3-211ENST00000486441 ATF3P18847 181 aa22.04■■□□□ 1.12
SDCCAG3-211ENST00000486441 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.11
SDCCAG3-211ENST00000486441 UPF1Q92900 1129 aaKnown RBP eCLIP22.01■■□□□ 1.11
SDCCAG3-211ENST00000486441 TRPM2O94759 1503 aa22■■□□□ 1.11
SDCCAG3-211ENST00000486441 METP08581 1390 aa21.99■■□□□ 1.11
SDCCAG3-211ENST00000486441 SHPRHQ149N8 1683 aa21.99■■□□□ 1.11
SDCCAG3-211ENST00000486441 ZNF772Q68DY9 489 aaPredicted RBP21.99■■□□□ 1.11
SDCCAG3-211ENST00000486441 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
SDCCAG3-211ENST00000486441 DCCP43146 1447 aa21.97■■□□□ 1.11
SDCCAG3-211ENST00000486441 MST1RQ04912 1400 aa21.97■■□□□ 1.11
SDCCAG3-211ENST00000486441 SETBP1Q9Y6X0 1596 aa21.96■■□□□ 1.11
SDCCAG3-211ENST00000486441 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
SDCCAG3-211ENST00000486441 MEX3CQ5U5Q3 659 aaKnown RBP21.95■■□□□ 1.1
SDCCAG3-211ENST00000486441 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
SDCCAG3-211ENST00000486441 ITGAEP38570 1179 aa21.94■■□□□ 1.1
SDCCAG3-211ENST00000486441 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
SDCCAG3-211ENST00000486441 DDX17Q92841 729 aaKnown RBP21.93■■□□□ 1.1
SDCCAG3-211ENST00000486441 SRCAPQ6ZRS2 3230 aa21.93■■□□□ 1.1
SDCCAG3-211ENST00000486441 NUTM2BA6NNL0 878 aaPredicted RBP21.92■■□□□ 1.1
SDCCAG3-211ENST00000486441 NUTM2EB1AL46 878 aaPredicted RBP21.92■■□□□ 1.1
SDCCAG3-211ENST00000486441 NUTM2AQ8IVF1 878 aaPredicted RBP21.92■■□□□ 1.1
SDCCAG3-211ENST00000486441 RXRBP28702 533 aa21.91■■□□□ 1.1
SDCCAG3-211ENST00000486441 AFF2P51816 1311 aa21.89■■□□□ 1.1
SDCCAG3-211ENST00000486441 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
SDCCAG3-211ENST00000486441 ZNF326Q5BKZ1 582 aaKnown RBP21.88■■□□□ 1.09
SDCCAG3-211ENST00000486441 LRRC59Q96AG4 307 aaKnown RBP21.88■■□□□ 1.09
SDCCAG3-211ENST00000486441 NHSL1Q5SYE7 1610 aa21.88■■□□□ 1.09
SDCCAG3-211ENST00000486441 CDK12Q9NYV4 1490 aaPredicted RBP21.87■■□□□ 1.09
SDCCAG3-211ENST00000486441 ADGRL3Q9HAR2 1447 aa21.87■■□□□ 1.09
SDCCAG3-211ENST00000486441 SPHKAPQ2M3C7 1700 aa21.86■■□□□ 1.09
SDCCAG3-211ENST00000486441 NEXMIFQ5QGS0 1516 aa21.86■■□□□ 1.09
SDCCAG3-211ENST00000486441 PNPLA6Q8IY17 1366 aa21.86■■□□□ 1.09
SDCCAG3-211ENST00000486441 CLTCL1P53675 1640 aa21.84■■□□□ 1.09
SDCCAG3-211ENST00000486441 C1orf167Q5SNV9 1468 aa21.82■■□□□ 1.08
SDCCAG3-211ENST00000486441 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
SDCCAG3-211ENST00000486441 ROBO2Q9HCK4 1378 aa21.8■■□□□ 1.08
SDCCAG3-211ENST00000486441 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
SDCCAG3-211ENST00000486441 C8orf37Q96NL8 207 aa21.79■■□□□ 1.08
SDCCAG3-211ENST00000486441 ORAI2Q96SN7 254 aa21.79■■□□□ 1.08
SDCCAG3-211ENST00000486441 RGS12O14924 1447 aa21.79■■□□□ 1.08
SDCCAG3-211ENST00000486441 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
SDCCAG3-211ENST00000486441 RBM6P78332 1123 aaKnown RBP21.78■■□□□ 1.08
SDCCAG3-211ENST00000486441 NAIPQ13075 1403 aa21.78■■□□□ 1.08
SDCCAG3-211ENST00000486441 LAMC1P11047 1609 aa21.77■■□□□ 1.07
SDCCAG3-211ENST00000486441 PTCH1Q13635 1447 aa21.75■■□□□ 1.07
SDCCAG3-211ENST00000486441 PRAG1Q86YV5 1406 aa21.75■■□□□ 1.07
SDCCAG3-211ENST00000486441 ADAMTS2O95450 1211 aa21.73■■□□□ 1.07
SDCCAG3-211ENST00000486441 RRBP1Q9P2E9 1410 aaKnown RBP21.72■■□□□ 1.07
SDCCAG3-211ENST00000486441 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
SDCCAG3-211ENST00000486441 NGLY1Q96IV0 654 aa21.72■■□□□ 1.07
SDCCAG3-211ENST00000486441 FNBP4Q8N3X1 1017 aaPredicted RBP21.7■■□□□ 1.06
SDCCAG3-211ENST00000486441 KIF1BO60333 1816 aa21.69■■□□□ 1.06
SDCCAG3-211ENST00000486441 RPGRIP1LQ68CZ1 1315 aa21.69■■□□□ 1.06
SDCCAG3-211ENST00000486441 EP400Q96L91 3159 aa21.69■■□□□ 1.06
SDCCAG3-211ENST00000486441 USP21Q9UK80 565 aa21.65■■□□□ 1.06
SDCCAG3-211ENST00000486441 HFM1A2PYH4 1435 aa21.64■■□□□ 1.06
SDCCAG3-211ENST00000486441 MYOM2P54296 1465 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms