RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 EID1Q9Y6B2 187 aa11.03□□□□□ -0.64
APH1A-207ENST00000486308 LTBP4Q8N2S1 1624 aa11.02□□□□□ -0.65
APH1A-207ENST00000486308 ZNF335Q9H4Z2 1342 aaPredicted RBP11.01□□□□□ -0.65
APH1A-207ENST00000486308 CCDC144AA2RUR9 1427 aa11.01□□□□□ -0.65
APH1A-207ENST00000486308 PLEKHG1Q9ULL1 1385 aa11□□□□□ -0.65
APH1A-207ENST00000486308 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.99□□□□□ -0.65
APH1A-207ENST00000486308 KIF1BO60333 1816 aa10.99□□□□□ -0.65
APH1A-207ENST00000486308 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
APH1A-207ENST00000486308 ANKRD30BQ9BXX2 1392 aa10.98□□□□□ -0.65
APH1A-207ENST00000486308 SPATA31E1Q6ZUB1 1445 aa10.98□□□□□ -0.65
APH1A-207ENST00000486308 PPP1R15AO75807 674 aaPredicted RBP10.97□□□□□ -0.65
APH1A-207ENST00000486308 HDGFP51858 240 aaKnown RBP10.97□□□□□ -0.65
APH1A-207ENST00000486308 ZNF326Q5BKZ1 582 aaKnown RBP10.97□□□□□ -0.65
APH1A-207ENST00000486308 NUTM2DQ5VT03 806 aaPredicted RBP10.97□□□□□ -0.65
APH1A-207ENST00000486308 CERKQ8TCT0 537 aa10.96□□□□□ -0.65
APH1A-207ENST00000486308 ADAMTS13Q76LX8 1427 aa10.95□□□□□ -0.66
APH1A-207ENST00000486308 SLC26A8Q96RN1 970 aa10.95□□□□□ -0.66
APH1A-207ENST00000486308 NRXN3Q9Y4C0 1643 aa10.95□□□□□ -0.66
APH1A-207ENST00000486308 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
APH1A-207ENST00000486308 CPS1P31327 1500 aa10.94□□□□□ -0.66
APH1A-207ENST00000486308 RPGRIP1LQ68CZ1 1315 aa10.94□□□□□ -0.66
APH1A-207ENST00000486308 STRCP1A6NGW2 1772 aa10.94□□□□□ -0.66
APH1A-207ENST00000486308 DIP2AQ14689 1571 aa10.94□□□□□ -0.66
APH1A-207ENST00000486308 BCANQ96GW7 911 aa10.93□□□□□ -0.66
APH1A-207ENST00000486308 IQSEC2Q5JU85 1478 aa10.93□□□□□ -0.66
APH1A-207ENST00000486308 PPLO60437 1756 aa10.93□□□□□ -0.66
APH1A-207ENST00000486308 NWD1Q149M9 1564 aa10.92□□□□□ -0.66
APH1A-207ENST00000486308 RGL3Q3MIN7 710 aa10.92□□□□□ -0.66
APH1A-207ENST00000486308 TBX22Q9Y458 520 aa10.92□□□□□ -0.66
APH1A-207ENST00000486308 IFT172Q9UG01 1749 aa10.92□□□□□ -0.66
APH1A-207ENST00000486308 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.66
APH1A-207ENST00000486308 LRRC7Q96NW7 1537 aa10.9□□□□□ -0.66
APH1A-207ENST00000486308 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
APH1A-207ENST00000486308 KCNA6P17658 529 aa10.9□□□□□ -0.66
APH1A-207ENST00000486308 PIK3R4Q99570 1358 aa10.9□□□□□ -0.67
APH1A-207ENST00000486308 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
APH1A-207ENST00000486308 NKTRP30414 1462 aaKnown RBP10.89□□□□□ -0.67
APH1A-207ENST00000486308 PTPRUQ92729 1446 aa10.89□□□□□ -0.67
APH1A-207ENST00000486308 METP08581 1390 aa10.89□□□□□ -0.67
APH1A-207ENST00000486308 MYOM2P54296 1465 aa10.88□□□□□ -0.67
APH1A-207ENST00000486308 SETD1AO15047 1707 aaKnown RBP10.88□□□□□ -0.67
APH1A-207ENST00000486308 PIK3C2GO75747 1445 aa10.88□□□□□ -0.67
APH1A-207ENST00000486308 CHD2O14647 1828 aaKnown RBP10.88□□□□□ -0.67
APH1A-207ENST00000486308 ALKQ9UM73 1620 aa10.87□□□□□ -0.67
APH1A-207ENST00000486308 NRXN1Q9ULB1 1477 aa10.87□□□□□ -0.67
APH1A-207ENST00000486308 FBXO41Q8TF61 875 aa10.87□□□□□ -0.67
APH1A-207ENST00000486308 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
APH1A-207ENST00000486308 TMEM94Q12767 1356 aa10.86□□□□□ -0.67
APH1A-207ENST00000486308 XRN1Q8IZH2 1706 aaKnown RBP10.86□□□□□ -0.67
APH1A-207ENST00000486308 ILDR1Q86SU0 546 aaPredicted RBP10.85□□□□□ -0.67
APH1A-207ENST00000486308 XIRP1Q702N8 1843 aaKnown RBP10.85□□□□□ -0.67
APH1A-207ENST00000486308 ASXL1Q8IXJ9 1541 aa10.84□□□□□ -0.67
APH1A-207ENST00000486308 AMOTL2Q9Y2J4 779 aa10.84□□□□□ -0.67
APH1A-207ENST00000486308 PRAG1Q86YV5 1406 aa10.84□□□□□ -0.67
APH1A-207ENST00000486308 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
APH1A-207ENST00000486308 RBM33Q96EV2 1170 aaKnown RBP10.83□□□□□ -0.68
APH1A-207ENST00000486308 SIN3AQ96ST3 1273 aa10.83□□□□□ -0.68
APH1A-207ENST00000486308 DCAF11Q8TEB1 546 aa10.82□□□□□ -0.68
APH1A-207ENST00000486308 PTCH1Q13635 1447 aa10.82□□□□□ -0.68
APH1A-207ENST00000486308 LAMC1P11047 1609 aa10.81□□□□□ -0.68
APH1A-207ENST00000486308 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
APH1A-207ENST00000486308 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
APH1A-207ENST00000486308 C14orf93Q9H972 538 aaKnown RBP10.81□□□□□ -0.68
APH1A-207ENST00000486308 NCOA3Q9Y6Q9 1424 aa10.81□□□□□ -0.68
APH1A-207ENST00000486308 KDM2AQ9Y2K7 1162 aa10.8□□□□□ -0.68
APH1A-207ENST00000486308 TECPR2O15040 1411 aa10.8□□□□□ -0.68
APH1A-207ENST00000486308 LRPPRCP42704 1394 aaKnown RBP10.79□□□□□ -0.68
APH1A-207ENST00000486308 ROBO2Q9HCK4 1378 aa10.79□□□□□ -0.68
APH1A-207ENST00000486308 ADGRB1O14514 1584 aa10.79□□□□□ -0.68
APH1A-207ENST00000486308 TOM1O60784 492 aa10.79□□□□□ -0.68
APH1A-207ENST00000486308 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
APH1A-207ENST00000486308 CFAP70Q5T0N1 1121 aa10.79□□□□□ -0.68
APH1A-207ENST00000486308 TMEM132EQ6IEE7 984 aa10.79□□□□□ -0.68
APH1A-207ENST00000486308 MSH6P52701 1360 aa10.78□□□□□ -0.68
APH1A-207ENST00000486308 YTHDC2Q9H6S0 1430 aaKnown RBP10.78□□□□□ -0.68
APH1A-207ENST00000486308 L3MBTL2Q969R5 705 aa10.78□□□□□ -0.68
APH1A-207ENST00000486308 ABCC11Q96J66 1382 aa10.77□□□□□ -0.68
APH1A-207ENST00000486308 KNDC1Q76NI1 1749 aa10.77□□□□□ -0.69
APH1A-207ENST00000486308 ADGRL3Q9HAR2 1447 aa10.76□□□□□ -0.69
APH1A-207ENST00000486308 STK26Q9P289 416 aa10.76□□□□□ -0.69
APH1A-207ENST00000486308 DCCP43146 1447 aa10.75□□□□□ -0.69
APH1A-207ENST00000486308 NALCNQ8IZF0 1738 aa10.75□□□□□ -0.69
APH1A-207ENST00000486308 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.75□□□□□ -0.69
APH1A-207ENST00000486308 PIP4K2BP78356 416 aa10.75□□□□□ -0.69
APH1A-207ENST00000486308 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
APH1A-207ENST00000486308 C19orf44Q9H6X5 657 aa10.75□□□□□ -0.69
APH1A-207ENST00000486308 DLC1Q96QB1 1528 aa10.74□□□□□ -0.69
APH1A-207ENST00000486308 KIAA1210Q9ULL0 1709 aa10.74□□□□□ -0.69
APH1A-207ENST00000486308 PLEKHH1Q9ULM0 1364 aa10.74□□□□□ -0.69
APH1A-207ENST00000486308 FAM135BQ49AJ0 1406 aa10.74□□□□□ -0.69
APH1A-207ENST00000486308 WAPLQ7Z5K2 1190 aa10.73□□□□□ -0.69
APH1A-207ENST00000486308 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
APH1A-207ENST00000486308 SCAF1Q9H7N4 1312 aaKnown RBP10.73□□□□□ -0.69
APH1A-207ENST00000486308 TONSLQ96HA7 1378 aa10.73□□□□□ -0.69
APH1A-207ENST00000486308 ATF3P18847 181 aa10.72□□□□□ -0.69
APH1A-207ENST00000486308 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
APH1A-207ENST00000486308 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
APH1A-207ENST00000486308 MST1RQ04912 1400 aa10.72□□□□□ -0.69
APH1A-207ENST00000486308 NBPF1Q3BBV0 1214 aa10.71□□□□□ -0.69
APH1A-207ENST00000486308 CDC42BPGQ6DT37 1551 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms