RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 STRCQ7RTU9 1775 aa16.59■□□□□ 0.25
ERGIC3-215ENST00000486268 KIF1BO60333 1816 aa16.59■□□□□ 0.25
ERGIC3-215ENST00000486268 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-215ENST00000486268 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
ERGIC3-215ENST00000486268 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
ERGIC3-215ENST00000486268 PRAG1Q86YV5 1406 aa16.56■□□□□ 0.24
ERGIC3-215ENST00000486268 ARHGAP23Q9P227 1491 aa16.55■□□□□ 0.24
ERGIC3-215ENST00000486268 POLR1AO95602 1720 aaPredicted RBP16.55■□□□□ 0.24
ERGIC3-215ENST00000486268 SLIT1O75093 1534 aa16.55■□□□□ 0.24
ERGIC3-215ENST00000486268 MIER1Q8N108 512 aa16.53■□□□□ 0.24
ERGIC3-215ENST00000486268 THEMISQ8N1K5 641 aaPredicted RBP16.52■□□□□ 0.24
ERGIC3-215ENST00000486268 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.24
ERGIC3-215ENST00000486268 LAMC1P11047 1609 aa16.52■□□□□ 0.23
ERGIC3-215ENST00000486268 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
ERGIC3-215ENST00000486268 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
ERGIC3-215ENST00000486268 ZNF326Q5BKZ1 582 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-215ENST00000486268 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
ERGIC3-215ENST00000486268 ZFYVE9O95405 1425 aa16.51■□□□□ 0.23
ERGIC3-215ENST00000486268 USP47Q96K76 1375 aa16.51■□□□□ 0.23
ERGIC3-215ENST00000486268 TMEM2Q9UHN6 1383 aa16.51■□□□□ 0.23
ERGIC3-215ENST00000486268 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-215ENST00000486268 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
ERGIC3-215ENST00000486268 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
ERGIC3-215ENST00000486268 ROCK2O75116 1388 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-215ENST00000486268 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
ERGIC3-215ENST00000486268 DDX10Q13206 875 aaKnown RBP16.49■□□□□ 0.23
ERGIC3-215ENST00000486268 HIRIP3Q9BW71 556 aaPredicted RBP16.49■□□□□ 0.23
ERGIC3-215ENST00000486268 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
ERGIC3-215ENST00000486268 PPLO60437 1756 aa16.49■□□□□ 0.23
ERGIC3-215ENST00000486268 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
ERGIC3-215ENST00000486268 LTKP29376 864 aa16.48■□□□□ 0.23
ERGIC3-215ENST00000486268 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
ERGIC3-215ENST00000486268 MYOM2P54296 1465 aa16.47■□□□□ 0.23
ERGIC3-215ENST00000486268 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
ERGIC3-215ENST00000486268 WASHC2AQ641Q2 1341 aa16.46■□□□□ 0.23
ERGIC3-215ENST00000486268 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
ERGIC3-215ENST00000486268 MED14O60244 1454 aa16.46■□□□□ 0.23
ERGIC3-215ENST00000486268 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
ERGIC3-215ENST00000486268 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
ERGIC3-215ENST00000486268 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
ERGIC3-215ENST00000486268 KIAA1210Q9ULL0 1709 aa16.43■□□□□ 0.22
ERGIC3-215ENST00000486268 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
ERGIC3-215ENST00000486268 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
ERGIC3-215ENST00000486268 NUTM2DQ5VT03 806 aaPredicted RBP16.42■□□□□ 0.22
ERGIC3-215ENST00000486268 NPHP4O75161 1426 aaPredicted RBP16.42■□□□□ 0.22
ERGIC3-215ENST00000486268 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
ERGIC3-215ENST00000486268 ANP32CO43423 234 aa16.4■□□□□ 0.22
ERGIC3-215ENST00000486268 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
ERGIC3-215ENST00000486268 NRXN1Q9ULB1 1477 aa16.4■□□□□ 0.22
ERGIC3-215ENST00000486268 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
ERGIC3-215ENST00000486268 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
ERGIC3-215ENST00000486268 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
ERGIC3-215ENST00000486268 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
ERGIC3-215ENST00000486268 SETD1AO15047 1707 aaKnown RBP16.37■□□□□ 0.21
ERGIC3-215ENST00000486268 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
ERGIC3-215ENST00000486268 SLC24A1O60721 1099 aa16.37■□□□□ 0.21
ERGIC3-215ENST00000486268 ILDR2Q71H61 639 aa16.37■□□□□ 0.21
ERGIC3-215ENST00000486268 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
ERGIC3-215ENST00000486268 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
ERGIC3-215ENST00000486268 NBPF1Q3BBV0 1214 aa16.36■□□□□ 0.21
ERGIC3-215ENST00000486268 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
ERGIC3-215ENST00000486268 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-215ENST00000486268 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
ERGIC3-215ENST00000486268 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-215ENST00000486268 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
ERGIC3-215ENST00000486268 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
ERGIC3-215ENST00000486268 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
ERGIC3-215ENST00000486268 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-215ENST00000486268 DIP2AQ14689 1571 aa16.33■□□□□ 0.2
ERGIC3-215ENST00000486268 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
ERGIC3-215ENST00000486268 PIK3C2GO75747 1445 aa16.32■□□□□ 0.2
ERGIC3-215ENST00000486268 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
ERGIC3-215ENST00000486268 SOCS7O14512 581 aa16.31■□□□□ 0.2
ERGIC3-215ENST00000486268 SLC26A8Q96RN1 970 aa16.31■□□□□ 0.2
ERGIC3-215ENST00000486268 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
ERGIC3-215ENST00000486268 DISP3Q9P2K9 1392 aa16.29■□□□□ 0.2
ERGIC3-215ENST00000486268 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
ERGIC3-215ENST00000486268 ASXL1Q8IXJ9 1541 aa16.29■□□□□ 0.2
ERGIC3-215ENST00000486268 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
ERGIC3-215ENST00000486268 TMF1P82094 1093 aa16.28■□□□□ 0.2
ERGIC3-215ENST00000486268 CDCA8Q53HL2 280 aa16.28■□□□□ 0.2
ERGIC3-215ENST00000486268 BCANQ96GW7 911 aa16.28■□□□□ 0.2
ERGIC3-215ENST00000486268 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
ERGIC3-215ENST00000486268 NWD1Q149M9 1564 aa16.28■□□□□ 0.2
ERGIC3-215ENST00000486268 TESK2Q96S53 571 aa16.27■□□□□ 0.2
ERGIC3-215ENST00000486268 TBX22Q9Y458 520 aa16.27■□□□□ 0.2
ERGIC3-215ENST00000486268 PTPRUQ92729 1446 aa16.26■□□□□ 0.19
ERGIC3-215ENST00000486268 METP08581 1390 aa16.26■□□□□ 0.19
ERGIC3-215ENST00000486268 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
ERGIC3-215ENST00000486268 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
ERGIC3-215ENST00000486268 XIRP1Q702N8 1843 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-215ENST00000486268 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-215ENST00000486268 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
ERGIC3-215ENST00000486268 SBNO2Q9Y2G9 1366 aa16.23■□□□□ 0.19
ERGIC3-215ENST00000486268 ADGRB1O14514 1584 aa16.21■□□□□ 0.19
ERGIC3-215ENST00000486268 PRKRIP1Q9H875 184 aaPredicted RBP16.21■□□□□ 0.19
ERGIC3-215ENST00000486268 CPS1P31327 1500 aa16.2■□□□□ 0.18
ERGIC3-215ENST00000486268 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
ERGIC3-215ENST00000486268 KCNA6P17658 529 aa16.2■□□□□ 0.18
ERGIC3-215ENST00000486268 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms