RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZFYVE9O95405 1425 aa29.41■■■□□ 2.3
SNX5-213ENST00000486039 CHGAP10645 457 aaKnown RBP29.41■■■□□ 2.3
SNX5-213ENST00000486039 TRIM52Q96A61 297 aa29.41■■■□□ 2.3
SNX5-213ENST00000486039 MYO5BQ9ULV0 1848 aa29.4■■■□□ 2.3
SNX5-213ENST00000486039 RIMS2Q9UQ26 1411 aa29.37■■■□□ 2.29
SNX5-213ENST00000486039 SPHKAPQ2M3C7 1700 aa29.35■■■□□ 2.29
SNX5-213ENST00000486039 SLC26A8Q96RN1 970 aa29.34■■■□□ 2.29
SNX5-213ENST00000486039 HDGFP51858 240 aaKnown RBP29.33■■■□□ 2.29
SNX5-213ENST00000486039 SOCS7O14512 581 aa29.32■■■□□ 2.28
SNX5-213ENST00000486039 SLC4A1APQ9BWU0 796 aaKnown RBP29.31■■■□□ 2.28
SNX5-213ENST00000486039 PLEKHG1Q9ULL1 1385 aa29.3■■■□□ 2.28
SNX5-213ENST00000486039 PPP1R15AO75807 674 aaPredicted RBP29.3■■■□□ 2.28
SNX5-213ENST00000486039 SENP3Q9H4L4 574 aaPredicted RBP29.3■■■□□ 2.28
SNX5-213ENST00000486039 KCNA6P17658 529 aa29.29■■■□□ 2.28
SNX5-213ENST00000486039 NUTM2DQ5VT03 806 aaPredicted RBP29.29■■■□□ 2.28
SNX5-213ENST00000486039 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.29■■■□□ 2.28
SNX5-213ENST00000486039 BCANQ96GW7 911 aa29.29■■■□□ 2.28
SNX5-213ENST00000486039 XIRP1Q702N8 1843 aaKnown RBP29.28■■■□□ 2.28
SNX5-213ENST00000486039 TRPM2O94759 1503 aa29.28■■■□□ 2.28
SNX5-213ENST00000486039 CLTCL1P53675 1640 aa29.26■■■□□ 2.27
SNX5-213ENST00000486039 TMEM94Q12767 1356 aa29.24■■■□□ 2.27
SNX5-213ENST00000486039 MED1Q15648 1581 aaPredicted RBP29.23■■■□□ 2.27
SNX5-213ENST00000486039 PROSER2Q86WR7 435 aaPredicted RBP29.22■■■□□ 2.27
SNX5-213ENST00000486039 SETD5Q9C0A6 1442 aa29.21■■■□□ 2.27
SNX5-213ENST00000486039 FOXD1Q16676 465 aa29.2■■■□□ 2.26
SNX5-213ENST00000486039 ADAMTS13Q76LX8 1427 aa29.2■■■□□ 2.26
SNX5-213ENST00000486039 ZNF326Q5BKZ1 582 aaKnown RBP29.19■■■□□ 2.26
SNX5-213ENST00000486039 TBX22Q9Y458 520 aa29.19■■■□□ 2.26
SNX5-213ENST00000486039 MPHOSPH9Q99550 1183 aa29.18■■■□□ 2.26
SNX5-213ENST00000486039 NWD1Q149M9 1564 aa29.18■■■□□ 2.26
SNX5-213ENST00000486039 NKTRP30414 1462 aaKnown RBP29.17■■■□□ 2.26
SNX5-213ENST00000486039 RBM33Q96EV2 1170 aaKnown RBP29.15■■■□□ 2.26
SNX5-213ENST00000486039 FAM135BQ49AJ0 1406 aa29.13■■■□□ 2.25
SNX5-213ENST00000486039 RAB3GAP2Q9H2M9 1393 aa29.12■■■□□ 2.25
SNX5-213ENST00000486039 KIF1BO60333 1816 aa29.11■■■□□ 2.25
SNX5-213ENST00000486039 NEXMIFQ5QGS0 1516 aa29.11■■■□□ 2.25
SNX5-213ENST00000486039 ACIN1Q9UKV3 1341 aaKnown RBP29.1■■■□□ 2.25
SNX5-213ENST00000486039 DIP2AQ14689 1571 aa29.09■■■□□ 2.25
SNX5-213ENST00000486039 CHD2O14647 1828 aaKnown RBP29.09■■■□□ 2.25
SNX5-213ENST00000486039 PHF23Q9BUL5 403 aaPredicted RBP29.07■■■□□ 2.24
SNX5-213ENST00000486039 NRXN3Q9Y4C0 1643 aa29.07■■■□□ 2.24
SNX5-213ENST00000486039 SETBP1Q9Y6X0 1596 aa29.06■■■□□ 2.24
SNX5-213ENST00000486039 MSH6P52701 1360 aa29.06■■■□□ 2.24
SNX5-213ENST00000486039 PIK3R4Q99570 1358 aa29.06■■■□□ 2.24
SNX5-213ENST00000486039 CCDC144AA2RUR9 1427 aa29.03■■■□□ 2.24
SNX5-213ENST00000486039 PTPRUQ92729 1446 aa29.03■■■□□ 2.24
SNX5-213ENST00000486039 RPGRIP1LQ68CZ1 1315 aa29.01■■■□□ 2.23
SNX5-213ENST00000486039 ROBO1Q9Y6N7 1651 aa29.01■■■□□ 2.23
SNX5-213ENST00000486039 AMOTL2Q9Y2J4 779 aa29■■■□□ 2.23
SNX5-213ENST00000486039 NCOA3Q9Y6Q9 1424 aa28.98■■■□□ 2.23
SNX5-213ENST00000486039 VGFO15240 615 aaPredicted RBP28.98■■■□□ 2.23
SNX5-213ENST00000486039 SLAIN2Q9P270 581 aa28.98■■■□□ 2.23
SNX5-213ENST00000486039 METP08581 1390 aa28.98■■■□□ 2.23
SNX5-213ENST00000486039 SPATA31E1Q6ZUB1 1445 aa28.95■■■□□ 2.23
SNX5-213ENST00000486039 HRCP23327 699 aa28.94■■■□□ 2.22
SNX5-213ENST00000486039 RGL3Q3MIN7 710 aa28.93■■■□□ 2.22
SNX5-213ENST00000486039 C14orf37Q86TY3 774 aa28.92■■■□□ 2.22
SNX5-213ENST00000486039 PPLO60437 1756 aa28.92■■■□□ 2.22
SNX5-213ENST00000486039 XRN1Q8IZH2 1706 aaKnown RBP28.9■■■□□ 2.22
SNX5-213ENST00000486039 C19orf44Q9H6X5 657 aa28.88■■■□□ 2.21
SNX5-213ENST00000486039 ADGRF5Q8IZF2 1346 aa28.87■■■□□ 2.21
SNX5-213ENST00000486039 CADPS2Q86UW7 1296 aa28.85■■■□□ 2.21
SNX5-213ENST00000486039 RGS17Q9UGC6 210 aaPredicted RBP28.85■■■□□ 2.21
SNX5-213ENST00000486039 SETD1AO15047 1707 aaKnown RBP28.85■■■□□ 2.21
SNX5-213ENST00000486039 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.84■■■□□ 2.21
SNX5-213ENST00000486039 ATF3P18847 181 aa28.84■■■□□ 2.21
SNX5-213ENST00000486039 ANKRD30BQ9BXX2 1392 aa28.84■■■□□ 2.21
SNX5-213ENST00000486039 PHLPP1O60346 1717 aa28.83■■■□□ 2.21
SNX5-213ENST00000486039 IFT172Q9UG01 1749 aa28.8■■■□□ 2.2
SNX5-213ENST00000486039 JCADQ9P266 1359 aa28.78■■■□□ 2.2
SNX5-213ENST00000486039 COL16A1Q07092 1604 aaPredicted RBP28.75■■■□□ 2.19
SNX5-213ENST00000486039 PIK3C2GO75747 1445 aa28.74■■■□□ 2.19
SNX5-213ENST00000486039 PTCH1Q13635 1447 aa28.74■■■□□ 2.19
SNX5-213ENST00000486039 ROBO2Q9HCK4 1378 aa28.74■■■□□ 2.19
SNX5-213ENST00000486039 DCCP43146 1447 aa28.73■■■□□ 2.19
SNX5-213ENST00000486039 PRAG1Q86YV5 1406 aa28.72■■■□□ 2.19
SNX5-213ENST00000486039 AHDC1Q5TGY3 1603 aaPredicted RBP28.71■■■□□ 2.19
SNX5-213ENST00000486039 ADGRL3Q9HAR2 1447 aa28.7■■■□□ 2.19
SNX5-213ENST00000486039 POTEAQ6S8J7 498 aa28.69■■■□□ 2.18
SNX5-213ENST00000486039 BRINP3Q76B58 766 aa28.69■■■□□ 2.18
SNX5-213ENST00000486039 MYOM2P54296 1465 aa28.68■■■□□ 2.18
SNX5-213ENST00000486039 NRXN1Q9ULB1 1477 aa28.68■■■□□ 2.18
SNX5-213ENST00000486039 TMEM132EQ6IEE7 984 aa28.67■■■□□ 2.18
SNX5-213ENST00000486039 ASXL1Q8IXJ9 1541 aa28.67■■■□□ 2.18
SNX5-213ENST00000486039 NALCNQ8IZF0 1738 aa28.66■■■□□ 2.18
SNX5-213ENST00000486039 C14orf93Q9H972 538 aaKnown RBP28.65■■■□□ 2.18
SNX5-213ENST00000486039 MST1RQ04912 1400 aa28.65■■■□□ 2.18
SNX5-213ENST00000486039 SPATA31A6Q5VVP1 1343 aa28.65■■■□□ 2.18
SNX5-213ENST00000486039 LRPPRCP42704 1394 aaKnown RBP28.63■■■□□ 2.17
SNX5-213ENST00000486039 STK26Q9P289 416 aa28.63■■■□□ 2.17
SNX5-213ENST00000486039 CFAP70Q5T0N1 1121 aa28.62■■■□□ 2.17
SNX5-213ENST00000486039 TECPR2O15040 1411 aa28.61■■■□□ 2.17
SNX5-213ENST00000486039 ABCC11Q96J66 1382 aa28.61■■■□□ 2.17
SNX5-213ENST00000486039 LRP6O75581 1613 aa28.59■■■□□ 2.17
SNX5-213ENST00000486039 SHPRHQ149N8 1683 aa28.59■■■□□ 2.17
SNX5-213ENST00000486039 DCAF11Q8TEB1 546 aa28.58■■■□□ 2.17
SNX5-213ENST00000486039 YTHDC2Q9H6S0 1430 aaKnown RBP28.58■■■□□ 2.17
SNX5-213ENST00000486039 WAPLQ7Z5K2 1190 aa28.57■■■□□ 2.16
SNX5-213ENST00000486039 KDM2AQ9Y2K7 1162 aa28.57■■■□□ 2.16
SNX5-213ENST00000486039 DHX57Q6P158 1386 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms