RNA–Protein interactions for RNA: ENST00000485976.5

NECAB3-212, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 1,016 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-212	ENST00000485976	STRCP1	A6NGW2	1772 aa		33.74	■■■□□ 2.99
NECAB3-212	ENST00000485976	PLEKHG1	Q9ULL1	1385 aa		33.72	■■■□□ 2.99
NECAB3-212	ENST00000485976	PPP1R15A	O75807	674 aa	Predicted RBP	33.7	■■■□□ 2.99
NECAB3-212	ENST00000485976	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.7	■■■□□ 2.99
NECAB3-212	ENST00000485976	CLTCL1	P53675	1640 aa		33.66	■■■□□ 2.98
NECAB3-212	ENST00000485976	LRRC7	Q96NW7	1537 aa		33.66	■■■□□ 2.98
NECAB3-212	ENST00000485976	KIF1B	O60333	1816 aa		33.65	■■■□□ 2.98
NECAB3-212	ENST00000485976	SETD5	Q9C0A6	1442 aa		33.64	■■■□□ 2.98
NECAB3-212	ENST00000485976	UBAP1L	F5GYI3	381 aa		33.64	■■■□□ 2.98
NECAB3-212	ENST00000485976	BCAN	Q96GW7	911 aa		33.62	■■■□□ 2.97
NECAB3-212	ENST00000485976	DIP2A	Q14689	1571 aa		33.61	■■■□□ 2.97
NECAB3-212	ENST00000485976	SLC26A8	Q96RN1	970 aa		33.61	■■■□□ 2.97
NECAB3-212	ENST00000485976	TOM1	O60784	492 aa		33.6	■■■□□ 2.97
NECAB3-212	ENST00000485976	KCNA6	P17658	529 aa		33.6	■■■□□ 2.97
NECAB3-212	ENST00000485976	NWD1	Q149M9	1564 aa		33.59	■■■□□ 2.97
NECAB3-212	ENST00000485976	NKTR	P30414	1462 aa	Known RBP	33.56	■■■□□ 2.96
NECAB3-212	ENST00000485976	TBX22	Q9Y458	520 aa		33.56	■■■□□ 2.96
NECAB3-212	ENST00000485976	CHD2	O14647	1828 aa	Known RBP	33.54	■■■□□ 2.96
NECAB3-212	ENST00000485976	ZNF326	Q5BKZ1	582 aa	Known RBP	33.54	■■■□□ 2.96
NECAB3-212	ENST00000485976	MPHOSPH9	Q99550	1183 aa		33.53	■■■□□ 2.96
NECAB3-212	ENST00000485976	XIRP1	Q702N8	1843 aa	Known RBP	33.51	■■■□□ 2.96
NECAB3-212	ENST00000485976	PIK3R4	Q99570	1358 aa		33.51	■■■□□ 2.96
NECAB3-212	ENST00000485976	ADAMTS13	Q76LX8	1427 aa		33.51	■■■□□ 2.95
NECAB3-212	ENST00000485976	NEXMIF	Q5QGS0	1516 aa		33.49	■■■□□ 2.95
NECAB3-212	ENST00000485976	SETBP1	Q9Y6X0	1596 aa		33.49	■■■□□ 2.95
NECAB3-212	ENST00000485976	RAB3GAP2	Q9H2M9	1393 aa		33.48	■■■□□ 2.95
NECAB3-212	ENST00000485976	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.47	■■■□□ 2.95
NECAB3-212	ENST00000485976	CCDC144A	A2RUR9	1427 aa		33.45	■■■□□ 2.95
NECAB3-212	ENST00000485976	RPGRIP1L	Q68CZ1	1315 aa		33.45	■■■□□ 2.95
NECAB3-212	ENST00000485976	ALK	Q9UM73	1620 aa		33.43	■■■□□ 2.94
NECAB3-212	ENST00000485976	TMEM94	Q12767	1356 aa		33.43	■■■□□ 2.94
NECAB3-212	ENST00000485976	NRXN3	Q9Y4C0	1643 aa		33.42	■■■□□ 2.94
NECAB3-212	ENST00000485976	HRC	P23327	699 aa		33.42	■■■□□ 2.94
NECAB3-212	ENST00000485976	PROSER2	Q86WR7	435 aa	Predicted RBP	33.42	■■■□□ 2.94
NECAB3-212	ENST00000485976	FOXD1	Q16676	465 aa		33.4	■■■□□ 2.94
NECAB3-212	ENST00000485976	NCOA3	Q9Y6Q9	1424 aa		33.38	■■■□□ 2.93
NECAB3-212	ENST00000485976	VGF	O15240	615 aa	Predicted RBP	33.38	■■■□□ 2.93
NECAB3-212	ENST00000485976	PIP4K2B	P78356	416 aa		33.38	■■■□□ 2.93
NECAB3-212	ENST00000485976	SENP3	Q9H4L4	574 aa	Predicted RBP	33.38	■■■□□ 2.93
NECAB3-212	ENST00000485976	SCAF1	Q9H7N4	1312 aa	Known RBP	33.37	■■■□□ 2.93
NECAB3-212	ENST00000485976	PPL	O60437	1756 aa		33.37	■■■□□ 2.93
NECAB3-212	ENST00000485976	MSH6	P52701	1360 aa		33.31	■■■□□ 2.92
NECAB3-212	ENST00000485976	SPATA31E1	Q6ZUB1	1445 aa		33.3	■■■□□ 2.92
NECAB3-212	ENST00000485976	XRN1	Q8IZH2	1706 aa	Known RBP	33.29	■■■□□ 2.92
NECAB3-212	ENST00000485976	AMOTL2	Q9Y2J4	779 aa		33.27	■■■□□ 2.92
NECAB3-212	ENST00000485976	PTPRU	Q92729	1446 aa		33.27	■■■□□ 2.92
NECAB3-212	ENST00000485976	ANKRD30B	Q9BXX2	1392 aa		33.25	■■■□□ 2.91
NECAB3-212	ENST00000485976	IFT172	Q9UG01	1749 aa		33.25	■■■□□ 2.91
NECAB3-212	ENST00000485976	MET	P08581	1390 aa		33.22	■■■□□ 2.91
NECAB3-212	ENST00000485976	SETD1A	O15047	1707 aa	Known RBP	33.22	■■■□□ 2.91
NECAB3-212	ENST00000485976	FAM135B	Q49AJ0	1406 aa		33.22	■■■□□ 2.91
NECAB3-212	ENST00000485976	HSPA1L	P34931	641 aa		33.22	■■■□□ 2.91
NECAB3-212	ENST00000485976	RBM33	Q96EV2	1170 aa	Known RBP	33.21	■■■□□ 2.91
NECAB3-212	ENST00000485976	RGL3	Q3MIN7	710 aa		33.17	■■■□□ 2.9
NECAB3-212	ENST00000485976	C14orf37	Q86TY3	774 aa		33.16	■■■□□ 2.9
NECAB3-212	ENST00000485976	C19orf44	Q9H6X5	657 aa		33.16	■■■□□ 2.9
NECAB3-212	ENST00000485976	PRAG1	Q86YV5	1406 aa		33.15	■■■□□ 2.9
NECAB3-212	ENST00000485976	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.14	■■■□□ 2.9
NECAB3-212	ENST00000485976	DCC	P43146	1447 aa		33.14	■■■□□ 2.9
NECAB3-212	ENST00000485976	CADPS2	Q86UW7	1296 aa		33.13	■■■□□ 2.89
NECAB3-212	ENST00000485976	ROBO1	Q9Y6N7	1651 aa		33.12	■■■□□ 2.89
NECAB3-212	ENST00000485976	PTCH1	Q13635	1447 aa		33.11	■■■□□ 2.89
NECAB3-212	ENST00000485976	SLAIN2	Q9P270	581 aa		33.11	■■■□□ 2.89
NECAB3-212	ENST00000485976	ADGRF5	Q8IZF2	1346 aa		33.09	■■■□□ 2.89
NECAB3-212	ENST00000485976	MYOM2	P54296	1465 aa		33.08	■■■□□ 2.89
NECAB3-212	ENST00000485976	ATF3	P18847	181 aa		33.08	■■■□□ 2.89
NECAB3-212	ENST00000485976	PIK3C2G	O75747	1445 aa		33.08	■■■□□ 2.89
NECAB3-212	ENST00000485976	ADGRL3	Q9HAR2	1447 aa		33.03	■■■□□ 2.88
NECAB3-212	ENST00000485976	NRXN1	Q9ULB1	1477 aa		33.03	■■■□□ 2.88
NECAB3-212	ENST00000485976	DISP3	Q9P2K9	1392 aa		33.02	■■■□□ 2.88
NECAB3-212	ENST00000485976	LAMC1	P11047	1609 aa		33.02	■■■□□ 2.88
NECAB3-212	ENST00000485976	STAC3	Q96MF2	364 aa		32.99	■■■□□ 2.87
NECAB3-212	ENST00000485976	NALCN	Q8IZF0	1738 aa		32.99	■■■□□ 2.87
NECAB3-212	ENST00000485976	TECPR2	O15040	1411 aa		32.97	■■■□□ 2.87
NECAB3-212	ENST00000485976	ROBO2	Q9HCK4	1378 aa		32.96	■■■□□ 2.87
NECAB3-212	ENST00000485976	KNDC1	Q76NI1	1749 aa		32.96	■■■□□ 2.87
NECAB3-212	ENST00000485976	LRPPRC	P42704	1394 aa	Known RBP	32.94	■■■□□ 2.86
NECAB3-212	ENST00000485976	MED1	Q15648	1581 aa	Predicted RBP	32.93	■■■□□ 2.86
NECAB3-212	ENST00000485976	PHLPP1	O60346	1717 aa		32.93	■■■□□ 2.86
NECAB3-212	ENST00000485976	ABCC11	Q96J66	1382 aa		32.93	■■■□□ 2.86
NECAB3-212	ENST00000485976	ASXL1	Q8IXJ9	1541 aa		32.92	■■■□□ 2.86
NECAB3-212	ENST00000485976	C14orf93	Q9H972	538 aa	Known RBP	32.92	■■■□□ 2.86
NECAB3-212	ENST00000485976	MST1R	Q04912	1400 aa		32.91	■■■□□ 2.86
NECAB3-212	ENST00000485976	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.89	■■■□□ 2.86
NECAB3-212	ENST00000485976	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.87	■■■□□ 2.85
NECAB3-212	ENST00000485976	DHX57	Q6P158	1386 aa	Known RBP	32.84	■■■□□ 2.85
NECAB3-212	ENST00000485976	BRINP3	Q76B58	766 aa		32.84	■■■□□ 2.85
NECAB3-212	ENST00000485976	COL16A1	Q07092	1604 aa	Predicted RBP	32.84	■■■□□ 2.85
NECAB3-212	ENST00000485976	TMEM132E	Q6IEE7	984 aa		32.83	■■■□□ 2.85
NECAB3-212	ENST00000485976	DCAF11	Q8TEB1	546 aa		32.83	■■■□□ 2.85
NECAB3-212	ENST00000485976	SIRT1	Q96EB6	747 aa		32.83	■■■□□ 2.85
NECAB3-212	ENST00000485976	CDC42BPG	Q6DT37	1551 aa		32.83	■■■□□ 2.85
NECAB3-212	ENST00000485976	CFAP70	Q5T0N1	1121 aa		32.81	■■■□□ 2.84
NECAB3-212	ENST00000485976	STK26	Q9P289	416 aa		32.81	■■■□□ 2.84
NECAB3-212	ENST00000485976	JCAD	Q9P266	1359 aa		32.79	■■■□□ 2.84
NECAB3-212	ENST00000485976	C1orf167	Q5SNV9	1468 aa		32.79	■■■□□ 2.84
NECAB3-212	ENST00000485976	NHSL1	Q5SYE7	1610 aa		32.77	■■■□□ 2.84
NECAB3-212	ENST00000485976	KDM2A	Q9Y2K7	1162 aa		32.76	■■■□□ 2.83
NECAB3-212	ENST00000485976	DLC1	Q96QB1	1528 aa		32.76	■■■□□ 2.83
NECAB3-212	ENST00000485976	TRIM26	Q12899	539 aa	Predicted RBP	32.75	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms