RNA–Protein interactions for RNA: ENST00000485766.1

PCOLCE2-208, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 5 BASIC

Gene PCOLCE2, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-208ENST00000485766 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
PCOLCE2-208ENST00000485766 E9PCH4 1651 aa22.23■■□□□ 1.15
PCOLCE2-208ENST00000485766 IQGAP3Q86VI3 1631 aa22.22■■□□□ 1.15
PCOLCE2-208ENST00000485766 KCNA6P17658 529 aa22.22■■□□□ 1.15
PCOLCE2-208ENST00000485766 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
PCOLCE2-208ENST00000485766 ROBO1Q9Y6N7 1651 aa22.22■■□□□ 1.15
PCOLCE2-208ENST00000485766 FAM135BQ49AJ0 1406 aa22.21■■□□□ 1.15
PCOLCE2-208ENST00000485766 ROCK1Q13464 1354 aa22.19■■□□□ 1.14
PCOLCE2-208ENST00000485766 PLEKHG1Q9ULL1 1385 aa22.19■■□□□ 1.14
PCOLCE2-208ENST00000485766 RIMS2Q9UQ26 1411 aa22.19■■□□□ 1.14
PCOLCE2-208ENST00000485766 CHD2O14647 1828 aaKnown RBP22.18■■□□□ 1.14
PCOLCE2-208ENST00000485766 PROSER2Q86WR7 435 aaPredicted RBP22.15■■□□□ 1.14
PCOLCE2-208ENST00000485766 DIP2AQ14689 1571 aa22.13■■□□□ 1.13
PCOLCE2-208ENST00000485766 RBM33Q96EV2 1170 aaKnown RBP22.13■■□□□ 1.13
PCOLCE2-208ENST00000485766 MSH6P52701 1360 aa22.12■■□□□ 1.13
PCOLCE2-208ENST00000485766 PPP1R15AO75807 674 aaPredicted RBP22.12■■□□□ 1.13
PCOLCE2-208ENST00000485766 BCANQ96GW7 911 aa22.12■■□□□ 1.13
PCOLCE2-208ENST00000485766 ADAMTS13Q76LX8 1427 aa22.08■■□□□ 1.13
PCOLCE2-208ENST00000485766 PHLPP1O60346 1717 aa22.08■■□□□ 1.12
PCOLCE2-208ENST00000485766 HDGFP51858 240 aaKnown RBP22.06■■□□□ 1.12
PCOLCE2-208ENST00000485766 SPHKAPQ2M3C7 1700 aa22.06■■□□□ 1.12
PCOLCE2-208ENST00000485766 NUP155O75694 1391 aa22.05■■□□□ 1.12
PCOLCE2-208ENST00000485766 CHGAP10645 457 aaKnown RBP22.05■■□□□ 1.12
PCOLCE2-208ENST00000485766 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.05■■□□□ 1.12
PCOLCE2-208ENST00000485766 RGS17Q9UGC6 210 aaPredicted RBP22.05■■□□□ 1.12
PCOLCE2-208ENST00000485766 TRPM2O94759 1503 aa22.04■■□□□ 1.12
PCOLCE2-208ENST00000485766 NCOA3Q9Y6Q9 1424 aa22.04■■□□□ 1.12
PCOLCE2-208ENST00000485766 COL16A1Q07092 1604 aaPredicted RBP22.03■■□□□ 1.12
PCOLCE2-208ENST00000485766 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
PCOLCE2-208ENST00000485766 PIK3R4Q99570 1358 aa22.02■■□□□ 1.12
PCOLCE2-208ENST00000485766 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.11
PCOLCE2-208ENST00000485766 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
PCOLCE2-208ENST00000485766 ITGAEP38570 1179 aa22■■□□□ 1.11
PCOLCE2-208ENST00000485766 NUTM2DQ5VT03 806 aaPredicted RBP22■■□□□ 1.11
PCOLCE2-208ENST00000485766 SLAIN2Q9P270 581 aa22■■□□□ 1.11
PCOLCE2-208ENST00000485766 XRN1Q8IZH2 1706 aaKnown RBP21.99■■□□□ 1.11
PCOLCE2-208ENST00000485766 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
PCOLCE2-208ENST00000485766 AHDC1Q5TGY3 1603 aaPredicted RBP21.97■■□□□ 1.11
PCOLCE2-208ENST00000485766 JCADQ9P266 1359 aa21.97■■□□□ 1.11
PCOLCE2-208ENST00000485766 PTPRUQ92729 1446 aa21.96■■□□□ 1.11
PCOLCE2-208ENST00000485766 CLTCL1P53675 1640 aa21.95■■□□□ 1.1
PCOLCE2-208ENST00000485766 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
PCOLCE2-208ENST00000485766 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
PCOLCE2-208ENST00000485766 SHPRHQ149N8 1683 aa21.92■■□□□ 1.1
PCOLCE2-208ENST00000485766 POTEAQ6S8J7 498 aa21.92■■□□□ 1.1
PCOLCE2-208ENST00000485766 DCCP43146 1447 aa21.91■■□□□ 1.1
PCOLCE2-208ENST00000485766 RRBP1Q9P2E9 1410 aaKnown RBP21.91■■□□□ 1.1
PCOLCE2-208ENST00000485766 NEXMIFQ5QGS0 1516 aa21.9■■□□□ 1.1
PCOLCE2-208ENST00000485766 CADPS2Q86UW7 1296 aa21.9■■□□□ 1.1
PCOLCE2-208ENST00000485766 LRP6O75581 1613 aa21.9■■□□□ 1.1
PCOLCE2-208ENST00000485766 SETD1AO15047 1707 aaKnown RBP21.89■■□□□ 1.1
PCOLCE2-208ENST00000485766 C19orf44Q9H6X5 657 aa21.89■■□□□ 1.09
PCOLCE2-208ENST00000485766 AMOTL2Q9Y2J4 779 aa21.88■■□□□ 1.09
PCOLCE2-208ENST00000485766 ATF3P18847 181 aa21.87■■□□□ 1.09
PCOLCE2-208ENST00000485766 NAIPQ13075 1403 aa21.87■■□□□ 1.09
PCOLCE2-208ENST00000485766 KIF1BO60333 1816 aa21.87■■□□□ 1.09
PCOLCE2-208ENST00000485766 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
PCOLCE2-208ENST00000485766 NALCNQ8IZF0 1738 aa21.84■■□□□ 1.09
PCOLCE2-208ENST00000485766 METP08581 1390 aa21.84■■□□□ 1.09
PCOLCE2-208ENST00000485766 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
PCOLCE2-208ENST00000485766 SPATA31A6Q5VVP1 1343 aa21.83■■□□□ 1.09
PCOLCE2-208ENST00000485766 ZNF326Q5BKZ1 582 aaKnown RBP21.83■■□□□ 1.09
PCOLCE2-208ENST00000485766 MST1RQ04912 1400 aa21.82■■□□□ 1.08
PCOLCE2-208ENST00000485766 ADGRL3Q9HAR2 1447 aa21.81■■□□□ 1.08
PCOLCE2-208ENST00000485766 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
PCOLCE2-208ENST00000485766 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
PCOLCE2-208ENST00000485766 PTCH1Q13635 1447 aa21.75■■□□□ 1.07
PCOLCE2-208ENST00000485766 SETD5Q9C0A6 1442 aa21.75■■□□□ 1.07
PCOLCE2-208ENST00000485766 MEX3CQ5U5Q3 659 aaKnown RBP21.75■■□□□ 1.07
PCOLCE2-208ENST00000485766 PPLO60437 1756 aa21.74■■□□□ 1.07
PCOLCE2-208ENST00000485766 PRAG1Q86YV5 1406 aa21.72■■□□□ 1.07
PCOLCE2-208ENST00000485766 LAMC1P11047 1609 aa21.71■■□□□ 1.07
PCOLCE2-208ENST00000485766 ZNF772Q68DY9 489 aaPredicted RBP21.7■■□□□ 1.06
PCOLCE2-208ENST00000485766 C1orf167Q5SNV9 1468 aa21.67■■□□□ 1.06
PCOLCE2-208ENST00000485766 ROBO2Q9HCK4 1378 aa21.67■■□□□ 1.06
PCOLCE2-208ENST00000485766 TRIM52Q96A61 297 aa21.67■■□□□ 1.06
PCOLCE2-208ENST00000485766 PNPLA6Q8IY17 1366 aa21.66■■□□□ 1.06
PCOLCE2-208ENST00000485766 NUTM2BA6NNL0 878 aaPredicted RBP21.66■■□□□ 1.06
PCOLCE2-208ENST00000485766 NUTM2EB1AL46 878 aaPredicted RBP21.66■■□□□ 1.06
PCOLCE2-208ENST00000485766 NUTM2AQ8IVF1 878 aaPredicted RBP21.66■■□□□ 1.06
PCOLCE2-208ENST00000485766 VGFO15240 615 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE2-208ENST00000485766 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.05
PCOLCE2-208ENST00000485766 CDK12Q9NYV4 1490 aaPredicted RBP21.64■■□□□ 1.05
PCOLCE2-208ENST00000485766 RPGRIP1LQ68CZ1 1315 aa21.63■■□□□ 1.05
PCOLCE2-208ENST00000485766 DDX17Q92841 729 aaKnown RBP21.63■■□□□ 1.05
PCOLCE2-208ENST00000485766 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
PCOLCE2-208ENST00000485766 CDC42BPGQ6DT37 1551 aa21.62■■□□□ 1.05
PCOLCE2-208ENST00000485766 IFT172Q9UG01 1749 aa21.62■■□□□ 1.05
PCOLCE2-208ENST00000485766 AFF2P51816 1311 aa21.61■■□□□ 1.05
PCOLCE2-208ENST00000485766 RXRBP28702 533 aa21.58■■□□□ 1.05
PCOLCE2-208ENST00000485766 CCDC144AA2RUR9 1427 aa21.57■■□□□ 1.04
PCOLCE2-208ENST00000485766 COL22A1Q8NFW1 1626 aaPredicted RBP21.56■■□□□ 1.04
PCOLCE2-208ENST00000485766 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
PCOLCE2-208ENST00000485766 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
PCOLCE2-208ENST00000485766 FOXD1Q16676 465 aa21.55■■□□□ 1.04
PCOLCE2-208ENST00000485766 C8orf37Q96NL8 207 aa21.55■■□□□ 1.04
PCOLCE2-208ENST00000485766 RGS12O14924 1447 aa21.55■■□□□ 1.04
PCOLCE2-208ENST00000485766 SOS2Q07890 1332 aaPredicted RBP21.55■■□□□ 1.04
PCOLCE2-208ENST00000485766 UPF1Q92900 1129 aaKnown RBP eCLIP21.54■■□□□ 1.04
PCOLCE2-208ENST00000485766 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms