RNA–Protein interactions for RNA: ENST00000485672.2

ATP1A3-206, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 970 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-206ENST00000485672 KCNA6P17658 529 aa28.99■■■□□ 2.23
ATP1A3-206ENST00000485672 NUP155O75694 1391 aa28.99■■■□□ 2.23
ATP1A3-206ENST00000485672 MED1Q15648 1581 aaPredicted RBP28.97■■■□□ 2.23
ATP1A3-206ENST00000485672 RIMS2Q9UQ26 1411 aa28.97■■■□□ 2.23
ATP1A3-206ENST00000485672 BCANQ96GW7 911 aa28.97■■■□□ 2.23
ATP1A3-206ENST00000485672 NWD1Q149M9 1564 aa28.96■■■□□ 2.23
ATP1A3-206ENST00000485672 TMEM94Q12767 1356 aa28.95■■■□□ 2.22
ATP1A3-206ENST00000485672 PLEKHG1Q9ULL1 1385 aa28.95■■■□□ 2.22
ATP1A3-206ENST00000485672 SOCS7O14512 581 aa28.94■■■□□ 2.22
ATP1A3-206ENST00000485672 PPP1R15AO75807 674 aaPredicted RBP28.94■■■□□ 2.22
ATP1A3-206ENST00000485672 HDGFP51858 240 aaKnown RBP28.94■■■□□ 2.22
ATP1A3-206ENST00000485672 CHGAP10645 457 aaKnown RBP28.93■■■□□ 2.22
ATP1A3-206ENST00000485672 NKTRP30414 1462 aaKnown RBP28.92■■■□□ 2.22
ATP1A3-206ENST00000485672 SENP3Q9H4L4 574 aaPredicted RBP28.92■■■□□ 2.22
ATP1A3-206ENST00000485672 PROSER2Q86WR7 435 aaPredicted RBP28.91■■■□□ 2.22
ATP1A3-206ENST00000485672 RRBP1Q9P2E9 1410 aaKnown RBP28.9■■■□□ 2.22
ATP1A3-206ENST00000485672 CHD2O14647 1828 aaKnown RBP28.88■■■□□ 2.21
ATP1A3-206ENST00000485672 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.88■■■□□ 2.21
ATP1A3-206ENST00000485672 RBM33Q96EV2 1170 aaKnown RBP28.85■■■□□ 2.21
ATP1A3-206ENST00000485672 SPHKAPQ2M3C7 1700 aa28.85■■■□□ 2.21
ATP1A3-206ENST00000485672 FAM135BQ49AJ0 1406 aa28.83■■■□□ 2.21
ATP1A3-206ENST00000485672 NUTM2DQ5VT03 806 aaPredicted RBP28.82■■■□□ 2.2
ATP1A3-206ENST00000485672 TBX22Q9Y458 520 aa28.82■■■□□ 2.2
ATP1A3-206ENST00000485672 DIP2AQ14689 1571 aa28.8■■■□□ 2.2
ATP1A3-206ENST00000485672 ADAMTS13Q76LX8 1427 aa28.79■■■□□ 2.2
ATP1A3-206ENST00000485672 NAIPQ13075 1403 aa28.78■■■□□ 2.2
ATP1A3-206ENST00000485672 MSH6P52701 1360 aa28.78■■■□□ 2.2
ATP1A3-206ENST00000485672 ROBO1Q9Y6N7 1651 aa28.78■■■□□ 2.2
ATP1A3-206ENST00000485672 PHF23Q9BUL5 403 aaPredicted RBP28.75■■■□□ 2.19
ATP1A3-206ENST00000485672 PIK3R4Q99570 1358 aa28.73■■■□□ 2.19
ATP1A3-206ENST00000485672 TRPM2O94759 1503 aa28.72■■■□□ 2.19
ATP1A3-206ENST00000485672 CLTCL1P53675 1640 aa28.7■■■□□ 2.19
ATP1A3-206ENST00000485672 NCOA3Q9Y6Q9 1424 aa28.69■■■□□ 2.18
ATP1A3-206ENST00000485672 HFM1A2PYH4 1435 aa28.68■■■□□ 2.18
ATP1A3-206ENST00000485672 ZNF326Q5BKZ1 582 aaKnown RBP28.67■■■□□ 2.18
ATP1A3-206ENST00000485672 SLAIN2Q9P270 581 aa28.67■■■□□ 2.18
ATP1A3-206ENST00000485672 NRXN3Q9Y4C0 1643 aa28.67■■■□□ 2.18
ATP1A3-206ENST00000485672 SETBP1Q9Y6X0 1596 aa28.66■■■□□ 2.18
ATP1A3-206ENST00000485672 C14orf37Q86TY3 774 aa28.65■■■□□ 2.18
ATP1A3-206ENST00000485672 KIF1BO60333 1816 aa28.64■■■□□ 2.18
ATP1A3-206ENST00000485672 PTPRUQ92729 1446 aa28.63■■■□□ 2.17
ATP1A3-206ENST00000485672 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.63■■■□□ 2.17
ATP1A3-206ENST00000485672 TRIM52Q96A61 297 aa28.62■■■□□ 2.17
ATP1A3-206ENST00000485672 AMOTL2Q9Y2J4 779 aa28.62■■■□□ 2.17
ATP1A3-206ENST00000485672 PHLPP1O60346 1717 aa28.62■■■□□ 2.17
ATP1A3-206ENST00000485672 NEXMIFQ5QGS0 1516 aa28.61■■■□□ 2.17
ATP1A3-206ENST00000485672 XRN1Q8IZH2 1706 aaKnown RBP28.6■■■□□ 2.17
ATP1A3-206ENST00000485672 C19orf44Q9H6X5 657 aa28.58■■■□□ 2.17
ATP1A3-206ENST00000485672 CADPS2Q86UW7 1296 aa28.57■■■□□ 2.16
ATP1A3-206ENST00000485672 ATF3P18847 181 aa28.55■■■□□ 2.16
ATP1A3-206ENST00000485672 SLC4A1APQ9BWU0 796 aaKnown RBP28.54■■■□□ 2.16
ATP1A3-206ENST00000485672 METP08581 1390 aa28.53■■■□□ 2.16
ATP1A3-206ENST00000485672 RGS17Q9UGC6 210 aaPredicted RBP28.52■■■□□ 2.16
ATP1A3-206ENST00000485672 COL16A1Q07092 1604 aaPredicted RBP28.51■■■□□ 2.15
ATP1A3-206ENST00000485672 JCADQ9P266 1359 aa28.5■■■□□ 2.15
ATP1A3-206ENST00000485672 DCCP43146 1447 aa28.49■■■□□ 2.15
ATP1A3-206ENST00000485672 AHDC1Q5TGY3 1603 aaPredicted RBP28.47■■■□□ 2.15
ATP1A3-206ENST00000485672 VGFO15240 615 aaPredicted RBP28.44■■■□□ 2.14
ATP1A3-206ENST00000485672 SETD1AO15047 1707 aaKnown RBP28.43■■■□□ 2.14
ATP1A3-206ENST00000485672 PPLO60437 1756 aa28.43■■■□□ 2.14
ATP1A3-206ENST00000485672 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
ATP1A3-206ENST00000485672 BRINP3Q76B58 766 aa28.41■■■□□ 2.14
ATP1A3-206ENST00000485672 FOXD1Q16676 465 aa28.4■■■□□ 2.14
ATP1A3-206ENST00000485672 ADGRL3Q9HAR2 1447 aa28.4■■■□□ 2.14
ATP1A3-206ENST00000485672 NALCNQ8IZF0 1738 aa28.4■■■□□ 2.14
ATP1A3-206ENST00000485672 MST1RQ04912 1400 aa28.39■■■□□ 2.14
ATP1A3-206ENST00000485672 SHPRHQ149N8 1683 aa28.38■■■□□ 2.13
ATP1A3-206ENST00000485672 ASXL1Q8IXJ9 1541 aa28.38■■■□□ 2.13
ATP1A3-206ENST00000485672 POTEAQ6S8J7 498 aa28.36■■■□□ 2.13
ATP1A3-206ENST00000485672 PTCH1Q13635 1447 aa28.35■■■□□ 2.13
ATP1A3-206ENST00000485672 SPATA31A6Q5VVP1 1343 aa28.35■■■□□ 2.13
ATP1A3-206ENST00000485672 CCDC144AA2RUR9 1427 aa28.35■■■□□ 2.13
ATP1A3-206ENST00000485672 NHSL1Q5SYE7 1610 aa28.33■■■□□ 2.13
ATP1A3-206ENST00000485672 MPHOSPH9Q99550 1183 aa28.33■■■□□ 2.13
ATP1A3-206ENST00000485672 LRP6O75581 1613 aa28.32■■■□□ 2.12
ATP1A3-206ENST00000485672 PRAG1Q86YV5 1406 aa28.3■■■□□ 2.12
ATP1A3-206ENST00000485672 ROBO2Q9HCK4 1378 aa28.3■■■□□ 2.12
ATP1A3-206ENST00000485672 SPATA31E1Q6ZUB1 1445 aa28.27■■■□□ 2.12
ATP1A3-206ENST00000485672 IFT172Q9UG01 1749 aa28.27■■■□□ 2.12
ATP1A3-206ENST00000485672 MEX3CQ5U5Q3 659 aaKnown RBP28.26■■■□□ 2.11
ATP1A3-206ENST00000485672 SETD5Q9C0A6 1442 aa28.26■■■□□ 2.11
ATP1A3-206ENST00000485672 RGL3Q3MIN7 710 aa28.25■■■□□ 2.11
ATP1A3-206ENST00000485672 ACIN1Q9UKV3 1341 aaKnown RBP28.24■■■□□ 2.11
ATP1A3-206ENST00000485672 ADGRF5Q8IZF2 1346 aa28.23■■■□□ 2.11
ATP1A3-206ENST00000485672 C1orf167Q5SNV9 1468 aa28.23■■■□□ 2.11
ATP1A3-206ENST00000485672 ANKRD30BQ9BXX2 1392 aa28.22■■■□□ 2.11
ATP1A3-206ENST00000485672 DDX17Q92841 729 aaKnown RBP28.2■■■□□ 2.1
ATP1A3-206ENST00000485672 LRRC59Q96AG4 307 aaKnown RBP28.2■■■□□ 2.1
ATP1A3-206ENST00000485672 NUTM2BA6NNL0 878 aaPredicted RBP28.19■■■□□ 2.1
ATP1A3-206ENST00000485672 NUTM2EB1AL46 878 aaPredicted RBP28.19■■■□□ 2.1
ATP1A3-206ENST00000485672 NUTM2AQ8IVF1 878 aaPredicted RBP28.19■■■□□ 2.1
ATP1A3-206ENST00000485672 LAMC1P11047 1609 aa28.18■■■□□ 2.1
ATP1A3-206ENST00000485672 ZNF772Q68DY9 489 aaPredicted RBP28.17■■■□□ 2.1
ATP1A3-206ENST00000485672 PNPLA6Q8IY17 1366 aa28.14■■■□□ 2.1
ATP1A3-206ENST00000485672 PIK3C2GO75747 1445 aa28.14■■■□□ 2.1
ATP1A3-206ENST00000485672 CDC42BPGQ6DT37 1551 aa28.14■■■□□ 2.1
ATP1A3-206ENST00000485672 TECPR2O15040 1411 aa28.13■■■□□ 2.09
ATP1A3-206ENST00000485672 ORAI2Q96SN7 254 aa28.13■■■□□ 2.09
ATP1A3-206ENST00000485672 RAB3GAP2Q9H2M9 1393 aa28.12■■■□□ 2.09
ATP1A3-206ENST00000485672 KNDC1Q76NI1 1749 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms