RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 NRXN1Q9ULB1 1477 aa22.92■■□□□ 1.26
APOE-205ENST00000485628 MYOM2P54296 1465 aa22.91■■□□□ 1.26
APOE-205ENST00000485628 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
APOE-205ENST00000485628 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
APOE-205ENST00000485628 RIMS2Q9UQ26 1411 aa22.89■■□□□ 1.25
APOE-205ENST00000485628 PPP1R15AO75807 674 aaPredicted RBP22.88■■□□□ 1.25
APOE-205ENST00000485628 STAG3Q9UJ98 1225 aa22.88■■□□□ 1.25
APOE-205ENST00000485628 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
APOE-205ENST00000485628 LTKP29376 864 aa22.85■■□□□ 1.25
APOE-205ENST00000485628 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
APOE-205ENST00000485628 ADGRF5Q8IZF2 1346 aa22.83■■□□□ 1.25
APOE-205ENST00000485628 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
APOE-205ENST00000485628 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.83■■□□□ 1.25
APOE-205ENST00000485628 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
APOE-205ENST00000485628 PIK3C2GO75747 1445 aa22.81■■□□□ 1.24
APOE-205ENST00000485628 MED14O60244 1454 aa22.8■■□□□ 1.24
APOE-205ENST00000485628 SCAF11Q99590 1463 aaKnown RBP22.8■■□□□ 1.24
APOE-205ENST00000485628 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
APOE-205ENST00000485628 HDGFP51858 240 aaKnown RBP22.8■■□□□ 1.24
APOE-205ENST00000485628 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
APOE-205ENST00000485628 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
APOE-205ENST00000485628 PLEKHG1Q9ULL1 1385 aa22.78■■□□□ 1.24
APOE-205ENST00000485628 TXNDC2Q86VQ3 553 aa22.78■■□□□ 1.24
APOE-205ENST00000485628 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
APOE-205ENST00000485628 SETBP1Q9Y6X0 1596 aa22.78■■□□□ 1.24
APOE-205ENST00000485628 ANKLE2Q86XL3 938 aa22.77■■□□□ 1.24
APOE-205ENST00000485628 NUTM2DQ5VT03 806 aaPredicted RBP22.76■■□□□ 1.23
APOE-205ENST00000485628 POLR1AO95602 1720 aaPredicted RBP22.76■■□□□ 1.23
APOE-205ENST00000485628 KIAA1210Q9ULL0 1709 aa22.76■■□□□ 1.23
APOE-205ENST00000485628 STRCQ7RTU9 1775 aa22.76■■□□□ 1.23
APOE-205ENST00000485628 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
APOE-205ENST00000485628 SETD1AO15047 1707 aaKnown RBP22.74■■□□□ 1.23
APOE-205ENST00000485628 HSPA2P54652 639 aa22.74■■□□□ 1.23
APOE-205ENST00000485628 C14orf93Q9H972 538 aaKnown RBP22.74■■□□□ 1.23
APOE-205ENST00000485628 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
APOE-205ENST00000485628 TRPM1Q7Z4N2 1603 aa22.73■■□□□ 1.23
APOE-205ENST00000485628 ALKQ9UM73 1620 aa22.71■■□□□ 1.23
APOE-205ENST00000485628 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
APOE-205ENST00000485628 LAMC1P11047 1609 aa22.69■■□□□ 1.22
APOE-205ENST00000485628 RALGAPBQ86X10 1494 aa22.69■■□□□ 1.22
APOE-205ENST00000485628 GPRASP1Q5JY77 1395 aa22.69■■□□□ 1.22
APOE-205ENST00000485628 NCKAP5LQ9HCH0 1330 aa22.69■■□□□ 1.22
APOE-205ENST00000485628 ADGRB1O14514 1584 aa22.68■■□□□ 1.22
APOE-205ENST00000485628 NPHP4O75161 1426 aaPredicted RBP22.67■■□□□ 1.22
APOE-205ENST00000485628 CFAP70Q5T0N1 1121 aa22.67■■□□□ 1.22
APOE-205ENST00000485628 TBX22Q9Y458 520 aa22.67■■□□□ 1.22
APOE-205ENST00000485628 DIP2AQ14689 1571 aa22.67■■□□□ 1.22
APOE-205ENST00000485628 ASXL1Q8IXJ9 1541 aa22.66■■□□□ 1.22
APOE-205ENST00000485628 NBPF1Q3BBV0 1214 aa22.65■■□□□ 1.22
APOE-205ENST00000485628 METP08581 1390 aa22.61■■□□□ 1.21
APOE-205ENST00000485628 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
APOE-205ENST00000485628 AEBP2Q6ZN18 517 aaPredicted RBP22.59■■□□□ 1.21
APOE-205ENST00000485628 SLC26A8Q96RN1 970 aa22.58■■□□□ 1.21
APOE-205ENST00000485628 CHD2O14647 1828 aaKnown RBP22.57■■□□□ 1.2
APOE-205ENST00000485628 PTPRUQ92729 1446 aa22.57■■□□□ 1.2
APOE-205ENST00000485628 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
APOE-205ENST00000485628 TMEM132EQ6IEE7 984 aa22.55■■□□□ 1.2
APOE-205ENST00000485628 TECPR2O15040 1411 aa22.55■■□□□ 1.2
APOE-205ENST00000485628 LRPPRCP42704 1394 aaKnown RBP22.54■■□□□ 1.2
APOE-205ENST00000485628 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
APOE-205ENST00000485628 YTHDC2Q9H6S0 1430 aaKnown RBP22.54■■□□□ 1.2
APOE-205ENST00000485628 XRN1Q8IZH2 1706 aaKnown RBP22.53■■□□□ 1.2
APOE-205ENST00000485628 KNDC1Q76NI1 1749 aa22.52■■□□□ 1.2
APOE-205ENST00000485628 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
APOE-205ENST00000485628 NWD1Q149M9 1564 aa22.51■■□□□ 1.19
APOE-205ENST00000485628 SIRT1Q96EB6 747 aa22.51■■□□□ 1.19
APOE-205ENST00000485628 CARD11Q9BXL7 1154 aa22.51■■□□□ 1.19
APOE-205ENST00000485628 DMRT2Q9Y5R5 561 aa22.51■■□□□ 1.19
APOE-205ENST00000485628 DLC1Q96QB1 1528 aa22.51■■□□□ 1.19
APOE-205ENST00000485628 BCANQ96GW7 911 aa22.5■■□□□ 1.19
APOE-205ENST00000485628 CPS1P31327 1500 aa22.48■■□□□ 1.19
APOE-205ENST00000485628 ARHGEF28Q8N1W1 1705 aaKnown RBP22.48■■□□□ 1.19
APOE-205ENST00000485628 KCNA6P17658 529 aa22.47■■□□□ 1.19
APOE-205ENST00000485628 STRCP1A6NGW2 1772 aa22.47■■□□□ 1.19
APOE-205ENST00000485628 AMOTL2Q9Y2J4 779 aa22.46■■□□□ 1.19
APOE-205ENST00000485628 PTCH1Q13635 1447 aa22.45■■□□□ 1.18
APOE-205ENST00000485628 FAM135BQ49AJ0 1406 aa22.45■■□□□ 1.18
APOE-205ENST00000485628 USP47Q96K76 1375 aa22.44■■□□□ 1.18
APOE-205ENST00000485628 ROBO2Q9HCK4 1378 aa22.43■■□□□ 1.18
APOE-205ENST00000485628 TRAK1Q9UPV9 953 aa22.42■■□□□ 1.18
APOE-205ENST00000485628 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
APOE-205ENST00000485628 EIF4G2P78344 907 aaKnown RBP eCLIP22.4■■□□□ 1.18
APOE-205ENST00000485628 STK26Q9P289 416 aa22.4■■□□□ 1.18
APOE-205ENST00000485628 SBNO2Q9Y2G9 1366 aa22.39■■□□□ 1.18
APOE-205ENST00000485628 HSPA5P11021 654 aaKnown RBP22.39■■□□□ 1.17
APOE-205ENST00000485628 TESK2Q96S53 571 aa22.39■■□□□ 1.17
APOE-205ENST00000485628 PLEKHH1Q9ULM0 1364 aa22.38■■□□□ 1.17
APOE-205ENST00000485628 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
APOE-205ENST00000485628 EIF3AQ14152 1382 aaKnown RBP22.37■■□□□ 1.17
APOE-205ENST00000485628 ZNF335Q9H4Z2 1342 aaPredicted RBP22.36■■□□□ 1.17
APOE-205ENST00000485628 LTBP4Q8N2S1 1624 aa22.35■■□□□ 1.17
APOE-205ENST00000485628 WAPLQ7Z5K2 1190 aa22.35■■□□□ 1.17
APOE-205ENST00000485628 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
APOE-205ENST00000485628 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.34■■□□□ 1.17
APOE-205ENST00000485628 CENPJQ9HC77 1338 aaPredicted RBP22.34■■□□□ 1.17
APOE-205ENST00000485628 NCOA3Q9Y6Q9 1424 aa22.34■■□□□ 1.17
APOE-205ENST00000485628 QRICH2Q9H0J4 1663 aa22.33■■□□□ 1.17
APOE-205ENST00000485628 XIRP1Q702N8 1843 aaKnown RBP22.31■■□□□ 1.16
APOE-205ENST00000485628 LRRC7Q96NW7 1537 aa22.31■■□□□ 1.16
APOE-205ENST00000485628 ADGRB2O60241 1585 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms