RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RBM33Q96EV2 1170 aaKnown RBP29.56■■■□□ 2.32
COL27A1-205ENST00000485397 PROSER2Q86WR7 435 aaPredicted RBP29.55■■■□□ 2.32
COL27A1-205ENST00000485397 ZFYVE9O95405 1425 aa29.54■■■□□ 2.32
COL27A1-205ENST00000485397 GCC2Q8IWJ2 1684 aa29.53■■■□□ 2.32
COL27A1-205ENST00000485397 RIMS2Q9UQ26 1411 aa29.52■■■□□ 2.32
COL27A1-205ENST00000485397 CHGAP10645 457 aaKnown RBP29.51■■■□□ 2.31
COL27A1-205ENST00000485397 MYO5BQ9ULV0 1848 aa29.5■■■□□ 2.31
COL27A1-205ENST00000485397 PPP1R15AO75807 674 aaPredicted RBP29.5■■■□□ 2.31
COL27A1-205ENST00000485397 TMEM131LA2VDJ0 1609 aa29.49■■■□□ 2.31
COL27A1-205ENST00000485397 PHF23Q9BUL5 403 aaPredicted RBP29.49■■■□□ 2.31
COL27A1-205ENST00000485397 PLEKHG1Q9ULL1 1385 aa29.49■■■□□ 2.31
COL27A1-205ENST00000485397 E9PCH4 1651 aa29.48■■■□□ 2.31
COL27A1-205ENST00000485397 HDGFP51858 240 aaKnown RBP29.48■■■□□ 2.31
COL27A1-205ENST00000485397 NUP155O75694 1391 aa29.47■■■□□ 2.31
COL27A1-205ENST00000485397 FAM135BQ49AJ0 1406 aa29.46■■■□□ 2.31
COL27A1-205ENST00000485397 NWD1Q149M9 1564 aa29.46■■■□□ 2.31
COL27A1-205ENST00000485397 IQGAP3Q86VI3 1631 aa29.45■■■□□ 2.31
COL27A1-205ENST00000485397 NKTRP30414 1462 aaKnown RBP29.44■■■□□ 2.3
COL27A1-205ENST00000485397 NUTM2DQ5VT03 806 aaPredicted RBP29.44■■■□□ 2.3
COL27A1-205ENST00000485397 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.42■■■□□ 2.3
COL27A1-205ENST00000485397 TBX22Q9Y458 520 aa29.41■■■□□ 2.3
COL27A1-205ENST00000485397 MSH6P52701 1360 aa29.38■■■□□ 2.29
COL27A1-205ENST00000485397 CHD2O14647 1828 aaKnown RBP29.36■■■□□ 2.29
COL27A1-205ENST00000485397 ADAMTS13Q76LX8 1427 aa29.36■■■□□ 2.29
COL27A1-205ENST00000485397 ROBO1Q9Y6N7 1651 aa29.34■■■□□ 2.29
COL27A1-205ENST00000485397 SLAIN2Q9P270 581 aa29.32■■■□□ 2.28
COL27A1-205ENST00000485397 RGS17Q9UGC6 210 aaPredicted RBP29.3■■■□□ 2.28
COL27A1-205ENST00000485397 C14orf37Q86TY3 774 aa29.26■■■□□ 2.27
COL27A1-205ENST00000485397 RRBP1Q9P2E9 1410 aaKnown RBP29.25■■■□□ 2.27
COL27A1-205ENST00000485397 DIP2AQ14689 1571 aa29.25■■■□□ 2.27
COL27A1-205ENST00000485397 PIK3R4Q99570 1358 aa29.25■■■□□ 2.27
COL27A1-205ENST00000485397 NCOA3Q9Y6Q9 1424 aa29.24■■■□□ 2.27
COL27A1-205ENST00000485397 AMOTL2Q9Y2J4 779 aa29.22■■■□□ 2.27
COL27A1-205ENST00000485397 PTPRUQ92729 1446 aa29.21■■■□□ 2.27
COL27A1-205ENST00000485397 SPHKAPQ2M3C7 1700 aa29.21■■■□□ 2.27
COL27A1-205ENST00000485397 ZNF326Q5BKZ1 582 aaKnown RBP29.21■■■□□ 2.27
COL27A1-205ENST00000485397 TRPM2O94759 1503 aa29.19■■■□□ 2.26
COL27A1-205ENST00000485397 NAIPQ13075 1403 aa29.19■■■□□ 2.26
COL27A1-205ENST00000485397 C19orf44Q9H6X5 657 aa29.18■■■□□ 2.26
COL27A1-205ENST00000485397 PHLPP1O60346 1717 aa29.17■■■□□ 2.26
COL27A1-205ENST00000485397 CADPS2Q86UW7 1296 aa29.16■■■□□ 2.26
COL27A1-205ENST00000485397 ATF3P18847 181 aa29.15■■■□□ 2.26
COL27A1-205ENST00000485397 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.14■■■□□ 2.26
COL27A1-205ENST00000485397 NRXN3Q9Y4C0 1643 aa29.14■■■□□ 2.26
COL27A1-205ENST00000485397 JCADQ9P266 1359 aa29.13■■■□□ 2.25
COL27A1-205ENST00000485397 POTEAQ6S8J7 498 aa29.13■■■□□ 2.25
COL27A1-205ENST00000485397 SETBP1Q9Y6X0 1596 aa29.12■■■□□ 2.25
COL27A1-205ENST00000485397 CLTCL1P53675 1640 aa29.12■■■□□ 2.25
COL27A1-205ENST00000485397 METP08581 1390 aa29.1■■■□□ 2.25
COL27A1-205ENST00000485397 TRIM52Q96A61 297 aa29.09■■■□□ 2.25
COL27A1-205ENST00000485397 COL16A1Q07092 1604 aaPredicted RBP29.09■■■□□ 2.25
COL27A1-205ENST00000485397 NEXMIFQ5QGS0 1516 aa29.06■■■□□ 2.24
COL27A1-205ENST00000485397 XRN1Q8IZH2 1706 aaKnown RBP29.06■■■□□ 2.24
COL27A1-205ENST00000485397 HFM1A2PYH4 1435 aa29.04■■■□□ 2.24
COL27A1-205ENST00000485397 BRINP3Q76B58 766 aa29.04■■■□□ 2.24
COL27A1-205ENST00000485397 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
COL27A1-205ENST00000485397 SLC4A1APQ9BWU0 796 aaKnown RBP29■■■□□ 2.23
COL27A1-205ENST00000485397 DCCP43146 1447 aa29■■■□□ 2.23
COL27A1-205ENST00000485397 KIF1BO60333 1816 aa28.99■■■□□ 2.23
COL27A1-205ENST00000485397 LRP6O75581 1613 aa28.98■■■□□ 2.23
COL27A1-205ENST00000485397 SPATA31A6Q5VVP1 1343 aa28.97■■■□□ 2.23
COL27A1-205ENST00000485397 MST1RQ04912 1400 aa28.96■■■□□ 2.23
COL27A1-205ENST00000485397 VGFO15240 615 aaPredicted RBP28.94■■■□□ 2.22
COL27A1-205ENST00000485397 MEX3CQ5U5Q3 659 aaKnown RBP28.93■■■□□ 2.22
COL27A1-205ENST00000485397 ADGRL3Q9HAR2 1447 aa28.93■■■□□ 2.22
COL27A1-205ENST00000485397 FOXD1Q16676 465 aa28.92■■■□□ 2.22
COL27A1-205ENST00000485397 ASXL1Q8IXJ9 1541 aa28.92■■■□□ 2.22
COL27A1-205ENST00000485397 RPGRIP1LQ68CZ1 1315 aa28.9■■■□□ 2.22
COL27A1-205ENST00000485397 SHPRHQ149N8 1683 aa28.89■■■□□ 2.22
COL27A1-205ENST00000485397 NUTM2BA6NNL0 878 aaPredicted RBP28.87■■■□□ 2.21
COL27A1-205ENST00000485397 NUTM2EB1AL46 878 aaPredicted RBP28.87■■■□□ 2.21
COL27A1-205ENST00000485397 NUTM2AQ8IVF1 878 aaPredicted RBP28.87■■■□□ 2.21
COL27A1-205ENST00000485397 DDX17Q92841 729 aaKnown RBP28.87■■■□□ 2.21
COL27A1-205ENST00000485397 ROBO2Q9HCK4 1378 aa28.86■■■□□ 2.21
COL27A1-205ENST00000485397 NALCNQ8IZF0 1738 aa28.86■■■□□ 2.21
COL27A1-205ENST00000485397 SETD1AO15047 1707 aaKnown RBP28.85■■■□□ 2.21
COL27A1-205ENST00000485397 SETD5Q9C0A6 1442 aa28.85■■■□□ 2.21
COL27A1-205ENST00000485397 ZNF772Q68DY9 489 aaPredicted RBP28.83■■■□□ 2.21
COL27A1-205ENST00000485397 PTCH1Q13635 1447 aa28.83■■■□□ 2.21
COL27A1-205ENST00000485397 NHSL1Q5SYE7 1610 aa28.83■■■□□ 2.21
COL27A1-205ENST00000485397 LRRC59Q96AG4 307 aaKnown RBP28.81■■■□□ 2.2
COL27A1-205ENST00000485397 C1orf167Q5SNV9 1468 aa28.8■■■□□ 2.2
COL27A1-205ENST00000485397 PPLO60437 1756 aa28.8■■■□□ 2.2
COL27A1-205ENST00000485397 MPHOSPH9Q99550 1183 aa28.78■■■□□ 2.2
COL27A1-205ENST00000485397 RGL3Q3MIN7 710 aa28.77■■■□□ 2.2
COL27A1-205ENST00000485397 ADGRF5Q8IZF2 1346 aa28.76■■■□□ 2.19
COL27A1-205ENST00000485397 ORAI2Q96SN7 254 aa28.76■■■□□ 2.19
COL27A1-205ENST00000485397 CCDC144AA2RUR9 1427 aa28.76■■■□□ 2.19
COL27A1-205ENST00000485397 PRAG1Q86YV5 1406 aa28.76■■■□□ 2.19
COL27A1-205ENST00000485397 PNPLA6Q8IY17 1366 aa28.75■■■□□ 2.19
COL27A1-205ENST00000485397 AFF2P51816 1311 aa28.72■■■□□ 2.19
COL27A1-205ENST00000485397 SPATA31E1Q6ZUB1 1445 aa28.71■■■□□ 2.19
COL27A1-205ENST00000485397 RXRBP28702 533 aa28.7■■■□□ 2.18
COL27A1-205ENST00000485397 C8orf37Q96NL8 207 aa28.68■■■□□ 2.18
COL27A1-205ENST00000485397 SOS2Q07890 1332 aaPredicted RBP28.68■■■□□ 2.18
COL27A1-205ENST00000485397 STK26Q9P289 416 aa28.67■■■□□ 2.18
COL27A1-205ENST00000485397 ANKRD30BQ9BXX2 1392 aa28.65■■■□□ 2.18
COL27A1-205ENST00000485397 TMEM132EQ6IEE7 984 aa28.64■■■□□ 2.18
COL27A1-205ENST00000485397 WAPLQ7Z5K2 1190 aa28.64■■■□□ 2.18
COL27A1-205ENST00000485397 LAMC1P11047 1609 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms