RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
RFTN1-210ENST00000484752 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
RFTN1-210ENST00000484752 PRAG1Q86YV5 1406 aa16.46■□□□□ 0.23
RFTN1-210ENST00000484752 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
RFTN1-210ENST00000484752 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
RFTN1-210ENST00000484752 NEXMIFQ5QGS0 1516 aa16.45■□□□□ 0.22
RFTN1-210ENST00000484752 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
RFTN1-210ENST00000484752 EID1Q9Y6B2 187 aa16.45■□□□□ 0.22
RFTN1-210ENST00000484752 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
RFTN1-210ENST00000484752 ZNF142P52746 1687 aaPredicted RBP16.45■□□□□ 0.22
RFTN1-210ENST00000484752 SETD1BQ9UPS6 1966 aaKnown RBP16.45■□□□□ 0.22
RFTN1-210ENST00000484752 PPLO60437 1756 aa16.44■□□□□ 0.22
RFTN1-210ENST00000484752 IFT172Q9UG01 1749 aa16.44■□□□□ 0.22
RFTN1-210ENST00000484752 RALGAPBQ86X10 1494 aa16.42■□□□□ 0.22
RFTN1-210ENST00000484752 NRXN1Q9ULB1 1477 aa16.42■□□□□ 0.22
RFTN1-210ENST00000484752 ROCK2O75116 1388 aaKnown RBP16.41■□□□□ 0.22
RFTN1-210ENST00000484752 MYO5BQ9ULV0 1848 aa16.4■□□□□ 0.22
RFTN1-210ENST00000484752 SLIT1O75093 1534 aa16.4■□□□□ 0.22
RFTN1-210ENST00000484752 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
RFTN1-210ENST00000484752 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
RFTN1-210ENST00000484752 ADGRF5Q8IZF2 1346 aa16.4■□□□□ 0.22
RFTN1-210ENST00000484752 LAMC1P11047 1609 aa16.38■□□□□ 0.21
RFTN1-210ENST00000484752 ARHGAP23Q9P227 1491 aa16.38■□□□□ 0.21
RFTN1-210ENST00000484752 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
RFTN1-210ENST00000484752 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
RFTN1-210ENST00000484752 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
RFTN1-210ENST00000484752 ANKLE2Q86XL3 938 aa16.37■□□□□ 0.21
RFTN1-210ENST00000484752 BCANQ96GW7 911 aa16.37■□□□□ 0.21
RFTN1-210ENST00000484752 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
RFTN1-210ENST00000484752 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
RFTN1-210ENST00000484752 SCAF11Q99590 1463 aaKnown RBP16.36■□□□□ 0.21
RFTN1-210ENST00000484752 PLEKHG1Q9ULL1 1385 aa16.35■□□□□ 0.21
RFTN1-210ENST00000484752 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
RFTN1-210ENST00000484752 C14orf93Q9H972 538 aaKnown RBP16.34■□□□□ 0.21
RFTN1-210ENST00000484752 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
RFTN1-210ENST00000484752 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
RFTN1-210ENST00000484752 CFAP70Q5T0N1 1121 aa16.32■□□□□ 0.2
RFTN1-210ENST00000484752 SETBP1Q9Y6X0 1596 aa16.32■□□□□ 0.2
RFTN1-210ENST00000484752 USP47Q96K76 1375 aa16.3■□□□□ 0.2
RFTN1-210ENST00000484752 LTKP29376 864 aa16.3■□□□□ 0.2
RFTN1-210ENST00000484752 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
RFTN1-210ENST00000484752 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
RFTN1-210ENST00000484752 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
RFTN1-210ENST00000484752 LMTK3Q96Q04 1460 aa16.28■□□□□ 0.2
RFTN1-210ENST00000484752 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
RFTN1-210ENST00000484752 NPHP4O75161 1426 aaPredicted RBP16.26■□□□□ 0.19
RFTN1-210ENST00000484752 POLR1AO95602 1720 aaPredicted RBP16.25■□□□□ 0.19
RFTN1-210ENST00000484752 IQGAP1P46940 1657 aa16.25■□□□□ 0.19
RFTN1-210ENST00000484752 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
RFTN1-210ENST00000484752 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
RFTN1-210ENST00000484752 ADGRB1O14514 1584 aa16.25■□□□□ 0.19
RFTN1-210ENST00000484752 MED14O60244 1454 aa16.24■□□□□ 0.19
RFTN1-210ENST00000484752 HSPA5P11021 654 aaKnown RBP16.24■□□□□ 0.19
RFTN1-210ENST00000484752 TBX22Q9Y458 520 aa16.24■□□□□ 0.19
RFTN1-210ENST00000484752 NRXN3Q9Y4C0 1643 aa16.23■□□□□ 0.19
RFTN1-210ENST00000484752 ADAMTS13Q76LX8 1427 aa16.23■□□□□ 0.19
RFTN1-210ENST00000484752 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
RFTN1-210ENST00000484752 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
RFTN1-210ENST00000484752 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
RFTN1-210ENST00000484752 LRPPRCP42704 1394 aaKnown RBP16.22■□□□□ 0.19
RFTN1-210ENST00000484752 NCKAP5LQ9HCH0 1330 aa16.2■□□□□ 0.18
RFTN1-210ENST00000484752 HSPA2P54652 639 aa16.2■□□□□ 0.18
RFTN1-210ENST00000484752 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
RFTN1-210ENST00000484752 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
RFTN1-210ENST00000484752 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
RFTN1-210ENST00000484752 ABCC11Q96J66 1382 aa16.19■□□□□ 0.18
RFTN1-210ENST00000484752 ST20-MTHFSA0A0A6YYL1 179 aa16.19■□□□□ 0.18
RFTN1-210ENST00000484752 STK26Q9P289 416 aa16.19■□□□□ 0.18
RFTN1-210ENST00000484752 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
RFTN1-210ENST00000484752 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
RFTN1-210ENST00000484752 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
RFTN1-210ENST00000484752 METP08581 1390 aa16.18■□□□□ 0.18
RFTN1-210ENST00000484752 POGKQ9P215 609 aa16.18■□□□□ 0.18
RFTN1-210ENST00000484752 DMRT2Q9Y5R5 561 aa16.18■□□□□ 0.18
RFTN1-210ENST00000484752 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
RFTN1-210ENST00000484752 SIRT1Q96EB6 747 aa16.16■□□□□ 0.18
RFTN1-210ENST00000484752 TECPR2O15040 1411 aa16.16■□□□□ 0.18
RFTN1-210ENST00000484752 TMF1P82094 1093 aa16.15■□□□□ 0.18
RFTN1-210ENST00000484752 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
RFTN1-210ENST00000484752 KNDC1Q76NI1 1749 aa16.15■□□□□ 0.18
RFTN1-210ENST00000484752 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
RFTN1-210ENST00000484752 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
RFTN1-210ENST00000484752 CPS1P31327 1500 aa16.14■□□□□ 0.17
RFTN1-210ENST00000484752 PTCH1Q13635 1447 aa16.13■□□□□ 0.17
RFTN1-210ENST00000484752 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
RFTN1-210ENST00000484752 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
RFTN1-210ENST00000484752 ARHGEF28Q8N1W1 1705 aaKnown RBP16.13■□□□□ 0.17
RFTN1-210ENST00000484752 KCNA6P17658 529 aa16.1■□□□□ 0.17
RFTN1-210ENST00000484752 TESK2Q96S53 571 aa16.1■□□□□ 0.17
RFTN1-210ENST00000484752 QRICH2Q9H0J4 1663 aa16.1■□□□□ 0.17
RFTN1-210ENST00000484752 EVC2Q86UK5 1308 aa16.09■□□□□ 0.17
RFTN1-210ENST00000484752 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
RFTN1-210ENST00000484752 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.17
RFTN1-210ENST00000484752 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.16
RFTN1-210ENST00000484752 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
RFTN1-210ENST00000484752 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
RFTN1-210ENST00000484752 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
RFTN1-210ENST00000484752 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
RFTN1-210ENST00000484752 STRCQ7RTU9 1775 aa16.07■□□□□ 0.16
RFTN1-210ENST00000484752 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms