RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 PPLO60437 1756 aa27.47■■□□□ 1.99
PDLIM4-207ENST00000484620 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
PDLIM4-207ENST00000484620 NEXMIFQ5QGS0 1516 aa27.46■■□□□ 1.99
PDLIM4-207ENST00000484620 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.46■■□□□ 1.99
PDLIM4-207ENST00000484620 ZFYVE9O95405 1425 aa27.45■■□□□ 1.98
PDLIM4-207ENST00000484620 TIMELESSQ9UNS1 1208 aa27.45■■□□□ 1.98
PDLIM4-207ENST00000484620 EID1Q9Y6B2 187 aa27.44■■□□□ 1.98
PDLIM4-207ENST00000484620 DCAF11Q8TEB1 546 aa27.42■■□□□ 1.98
PDLIM4-207ENST00000484620 L3MBTL2Q969R5 705 aa27.42■■□□□ 1.98
PDLIM4-207ENST00000484620 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
PDLIM4-207ENST00000484620 PPP1R15AO75807 674 aaPredicted RBP27.41■■□□□ 1.98
PDLIM4-207ENST00000484620 HSPA2P54652 639 aa27.41■■□□□ 1.98
PDLIM4-207ENST00000484620 ANKLE2Q86XL3 938 aa27.41■■□□□ 1.98
PDLIM4-207ENST00000484620 MYOM2P54296 1465 aa27.4■■□□□ 1.98
PDLIM4-207ENST00000484620 SCAF11Q99590 1463 aaKnown RBP27.4■■□□□ 1.98
PDLIM4-207ENST00000484620 VGFO15240 615 aaPredicted RBP27.4■■□□□ 1.98
PDLIM4-207ENST00000484620 TXNDC2Q86VQ3 553 aa27.4■■□□□ 1.98
PDLIM4-207ENST00000484620 POLR1AO95602 1720 aaPredicted RBP27.39■■□□□ 1.98
PDLIM4-207ENST00000484620 NUTM2DQ5VT03 806 aaPredicted RBP27.37■■□□□ 1.97
PDLIM4-207ENST00000484620 KDM2AQ9Y2K7 1162 aa27.37■■□□□ 1.97
PDLIM4-207ENST00000484620 LTKP29376 864 aa27.35■■□□□ 1.97
PDLIM4-207ENST00000484620 PLEKHG1Q9ULL1 1385 aa27.32■■□□□ 1.96
PDLIM4-207ENST00000484620 ADGRF5Q8IZF2 1346 aa27.31■■□□□ 1.96
PDLIM4-207ENST00000484620 NRXN1Q9ULB1 1477 aa27.31■■□□□ 1.96
PDLIM4-207ENST00000484620 NCKAP5LQ9HCH0 1330 aa27.3■■□□□ 1.96
PDLIM4-207ENST00000484620 BCANQ96GW7 911 aa27.29■■□□□ 1.96
PDLIM4-207ENST00000484620 MED14O60244 1454 aa27.29■■□□□ 1.96
PDLIM4-207ENST00000484620 NPHP4O75161 1426 aaPredicted RBP27.28■■□□□ 1.96
PDLIM4-207ENST00000484620 STRCQ7RTU9 1775 aa27.27■■□□□ 1.96
PDLIM4-207ENST00000484620 SETBP1Q9Y6X0 1596 aa27.27■■□□□ 1.96
PDLIM4-207ENST00000484620 PIK3C2GO75747 1445 aa27.27■■□□□ 1.96
PDLIM4-207ENST00000484620 PRAG1Q86YV5 1406 aa27.27■■□□□ 1.96
PDLIM4-207ENST00000484620 IQGAP1P46940 1657 aa27.27■■□□□ 1.96
PDLIM4-207ENST00000484620 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
PDLIM4-207ENST00000484620 LAMC1P11047 1609 aa27.24■■□□□ 1.95
PDLIM4-207ENST00000484620 NRXN3Q9Y4C0 1643 aa27.23■■□□□ 1.95
PDLIM4-207ENST00000484620 SENP3Q9H4L4 574 aaPredicted RBP27.22■■□□□ 1.95
PDLIM4-207ENST00000484620 DIP2AQ14689 1571 aa27.22■■□□□ 1.95
PDLIM4-207ENST00000484620 KIAA1210Q9ULL0 1709 aa27.2■■□□□ 1.94
PDLIM4-207ENST00000484620 ALKQ9UM73 1620 aa27.19■■□□□ 1.94
PDLIM4-207ENST00000484620 DMRT2Q9Y5R5 561 aa27.19■■□□□ 1.94
PDLIM4-207ENST00000484620 ADAMTS13Q76LX8 1427 aa27.18■■□□□ 1.94
PDLIM4-207ENST00000484620 C14orf93Q9H972 538 aaKnown RBP27.17■■□□□ 1.94
PDLIM4-207ENST00000484620 TRPM1Q7Z4N2 1603 aa27.16■■□□□ 1.94
PDLIM4-207ENST00000484620 NBPF8Q3BBV2 869 aa27.16■■□□□ 1.94
PDLIM4-207ENST00000484620 CFAP70Q5T0N1 1121 aa27.15■■□□□ 1.94
PDLIM4-207ENST00000484620 SLC26A8Q96RN1 970 aa27.15■■□□□ 1.94
PDLIM4-207ENST00000484620 TBX22Q9Y458 520 aa27.15■■□□□ 1.94
PDLIM4-207ENST00000484620 SETD1AO15047 1707 aaKnown RBP27.15■■□□□ 1.94
PDLIM4-207ENST00000484620 RALGAPBQ86X10 1494 aa27.13■■□□□ 1.93
PDLIM4-207ENST00000484620 PIK3R4Q99570 1358 aa27.09■■□□□ 1.93
PDLIM4-207ENST00000484620 ROCK2O75116 1388 aaKnown RBP27.09■■□□□ 1.93
PDLIM4-207ENST00000484620 METP08581 1390 aa27.07■■□□□ 1.92
PDLIM4-207ENST00000484620 ASXL1Q8IXJ9 1541 aa27.06■■□□□ 1.92
PDLIM4-207ENST00000484620 ADGRB1O14514 1584 aa27.06■■□□□ 1.92
PDLIM4-207ENST00000484620 NBPF1Q3BBV0 1214 aa27.05■■□□□ 1.92
PDLIM4-207ENST00000484620 TMEM132EQ6IEE7 984 aa27.04■■□□□ 1.92
PDLIM4-207ENST00000484620 GPRASP1Q5JY77 1395 aa27.03■■□□□ 1.92
PDLIM4-207ENST00000484620 CHD2O14647 1828 aaKnown RBP27.02■■□□□ 1.92
PDLIM4-207ENST00000484620 YTHDC2Q9H6S0 1430 aaKnown RBP27.01■■□□□ 1.91
PDLIM4-207ENST00000484620 CARD11Q9BXL7 1154 aa27.01■■□□□ 1.91
PDLIM4-207ENST00000484620 LRPPRCP42704 1394 aaKnown RBP27■■□□□ 1.91
PDLIM4-207ENST00000484620 NWD1Q149M9 1564 aa26.99■■□□□ 1.91
PDLIM4-207ENST00000484620 KNDC1Q76NI1 1749 aa26.98■■□□□ 1.91
PDLIM4-207ENST00000484620 XRN1Q8IZH2 1706 aaKnown RBP26.98■■□□□ 1.91
PDLIM4-207ENST00000484620 PTPRUQ92729 1446 aa26.98■■□□□ 1.91
PDLIM4-207ENST00000484620 KCNA6P17658 529 aa26.97■■□□□ 1.91
PDLIM4-207ENST00000484620 STK26Q9P289 416 aa26.97■■□□□ 1.91
PDLIM4-207ENST00000484620 AMOTL2Q9Y2J4 779 aa26.97■■□□□ 1.91
PDLIM4-207ENST00000484620 ABCC11Q96J66 1382 aa26.96■■□□□ 1.91
PDLIM4-207ENST00000484620 TECPR2O15040 1411 aa26.94■■□□□ 1.9
PDLIM4-207ENST00000484620 CPS1P31327 1500 aa26.93■■□□□ 1.9
PDLIM4-207ENST00000484620 DLC1Q96QB1 1528 aa26.93■■□□□ 1.9
PDLIM4-207ENST00000484620 NKTRP30414 1462 aaKnown RBP26.93■■□□□ 1.9
PDLIM4-207ENST00000484620 TRAK1Q9UPV9 953 aa26.92■■□□□ 1.9
PDLIM4-207ENST00000484620 EIF3AQ14152 1382 aaKnown RBP26.92■■□□□ 1.9
PDLIM4-207ENST00000484620 PTCH1Q13635 1447 aa26.91■■□□□ 1.9
PDLIM4-207ENST00000484620 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
PDLIM4-207ENST00000484620 ARHGEF28Q8N1W1 1705 aaKnown RBP26.9■■□□□ 1.9
PDLIM4-207ENST00000484620 STRCP1A6NGW2 1772 aa26.9■■□□□ 1.9
PDLIM4-207ENST00000484620 SIRT1Q96EB6 747 aa26.88■■□□□ 1.89
PDLIM4-207ENST00000484620 FAM135BQ49AJ0 1406 aa26.88■■□□□ 1.89
PDLIM4-207ENST00000484620 USP47Q96K76 1375 aa26.87■■□□□ 1.89
PDLIM4-207ENST00000484620 ROBO2Q9HCK4 1378 aa26.86■■□□□ 1.89
PDLIM4-207ENST00000484620 POGKQ9P215 609 aa26.85■■□□□ 1.89
PDLIM4-207ENST00000484620 EIF4G2P78344 907 aaKnown RBP eCLIP26.83■■□□□ 1.89
PDLIM4-207ENST00000484620 PROSER2Q86WR7 435 aaPredicted RBP26.83■■□□□ 1.89
PDLIM4-207ENST00000484620 PRAM1Q96QH2 718 aa26.83■■□□□ 1.89
PDLIM4-207ENST00000484620 CENPJQ9HC77 1338 aaPredicted RBP26.82■■□□□ 1.88
PDLIM4-207ENST00000484620 LTBP4Q8N2S1 1624 aa26.79■■□□□ 1.88
PDLIM4-207ENST00000484620 WAPLQ7Z5K2 1190 aa26.79■■□□□ 1.88
PDLIM4-207ENST00000484620 QRICH2Q9H0J4 1663 aa26.79■■□□□ 1.88
PDLIM4-207ENST00000484620 PLEKHH1Q9ULM0 1364 aa26.78■■□□□ 1.88
PDLIM4-207ENST00000484620 LRRC7Q96NW7 1537 aa26.78■■□□□ 1.88
PDLIM4-207ENST00000484620 NCOA3Q9Y6Q9 1424 aa26.76■■□□□ 1.87
PDLIM4-207ENST00000484620 TMEM94Q12767 1356 aa26.76■■□□□ 1.87
PDLIM4-207ENST00000484620 ST20-MTHFSA0A0A6YYL1 179 aa26.76■■□□□ 1.87
PDLIM4-207ENST00000484620 SAFB2Q14151 953 aaKnown RBP eCLIP26.76■■□□□ 1.87
PDLIM4-207ENST00000484620 HSPA5P11021 654 aaKnown RBP26.75■■□□□ 1.87
PDLIM4-207ENST00000484620 C14orf37Q86TY3 774 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms