RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 SLC52A1Q9NWF4 448 aa20.08■□□□□ 0.81
DNMT3A-213ENST00000484184 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.81
DNMT3A-213ENST00000484184 ZFYVE9O95405 1425 aa20.08■□□□□ 0.8
DNMT3A-213ENST00000484184 PHLPP1O60346 1717 aa20.07■□□□□ 0.8
DNMT3A-213ENST00000484184 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
DNMT3A-213ENST00000484184 JCADQ9P266 1359 aa20.07■□□□□ 0.8
DNMT3A-213ENST00000484184 COL16A1Q07092 1604 aaPredicted RBP20.05■□□□□ 0.8
DNMT3A-213ENST00000484184 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
DNMT3A-213ENST00000484184 MYO5BQ9ULV0 1848 aa20.04■□□□□ 0.8
DNMT3A-213ENST00000484184 LRP6O75581 1613 aa20.02■□□□□ 0.8
DNMT3A-213ENST00000484184 ADGRL2O95490 1459 aa20.02■□□□□ 0.8
DNMT3A-213ENST00000484184 RPRD2Q5VT52 1461 aaKnown RBP20.02■□□□□ 0.8
DNMT3A-213ENST00000484184 BCANQ96GW7 911 aa20.01■□□□□ 0.79
DNMT3A-213ENST00000484184 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
DNMT3A-213ENST00000484184 TMEM131LA2VDJ0 1609 aa20■□□□□ 0.79
DNMT3A-213ENST00000484184 NCOA3Q9Y6Q9 1424 aa20■□□□□ 0.79
DNMT3A-213ENST00000484184 TBX22Q9Y458 520 aa19.99■□□□□ 0.79
DNMT3A-213ENST00000484184 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
DNMT3A-213ENST00000484184 ADAMTS13Q76LX8 1427 aa19.97■□□□□ 0.79
DNMT3A-213ENST00000484184 SPATA31A6Q5VVP1 1343 aa19.97■□□□□ 0.79
DNMT3A-213ENST00000484184 AHDC1Q5TGY3 1603 aaPredicted RBP19.95■□□□□ 0.78
DNMT3A-213ENST00000484184 ANKRD50Q9ULJ7 1429 aa19.95■□□□□ 0.78
DNMT3A-213ENST00000484184 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.94■□□□□ 0.78
DNMT3A-213ENST00000484184 UPF1Q92900 1129 aaKnown RBP eCLIP19.94■□□□□ 0.78
DNMT3A-213ENST00000484184 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
DNMT3A-213ENST00000484184 HDGFP51858 240 aaKnown RBP19.93■□□□□ 0.78
DNMT3A-213ENST00000484184 SHPRHQ149N8 1683 aa19.93■□□□□ 0.78
DNMT3A-213ENST00000484184 APLP2Q06481 763 aa19.92■□□□□ 0.78
DNMT3A-213ENST00000484184 C19orf44Q9H6X5 657 aa19.92■□□□□ 0.78
DNMT3A-213ENST00000484184 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
DNMT3A-213ENST00000484184 PIK3R4Q99570 1358 aa19.91■□□□□ 0.78
DNMT3A-213ENST00000484184 CADPS2Q86UW7 1296 aa19.9■□□□□ 0.78
DNMT3A-213ENST00000484184 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.9■□□□□ 0.78
DNMT3A-213ENST00000484184 DIP2AQ14689 1571 aa19.9■□□□□ 0.78
DNMT3A-213ENST00000484184 NUTM2DQ5VT03 806 aaPredicted RBP19.89■□□□□ 0.77
DNMT3A-213ENST00000484184 UNC13BO14795 1591 aa19.88■□□□□ 0.77
DNMT3A-213ENST00000484184 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
DNMT3A-213ENST00000484184 C14orf37Q86TY3 774 aa19.88■□□□□ 0.77
DNMT3A-213ENST00000484184 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
DNMT3A-213ENST00000484184 E9PCH4 1651 aa19.87■□□□□ 0.77
DNMT3A-213ENST00000484184 MEX3CQ5U5Q3 659 aaKnown RBP19.87■□□□□ 0.77
DNMT3A-213ENST00000484184 BRINP3Q76B58 766 aa19.87■□□□□ 0.77
DNMT3A-213ENST00000484184 ATF3P18847 181 aa19.86■□□□□ 0.77
DNMT3A-213ENST00000484184 CHGAP10645 457 aaKnown RBP19.85■□□□□ 0.77
DNMT3A-213ENST00000484184 FAM50AQ14320 339 aaKnown RBP19.84■□□□□ 0.77
DNMT3A-213ENST00000484184 AMOTL2Q9Y2J4 779 aa19.84■□□□□ 0.77
DNMT3A-213ENST00000484184 RXRBP28702 533 aa19.83■□□□□ 0.77
DNMT3A-213ENST00000484184 CDK12Q9NYV4 1490 aaPredicted RBP19.83■□□□□ 0.76
DNMT3A-213ENST00000484184 TRPM2O94759 1503 aa19.82■□□□□ 0.76
DNMT3A-213ENST00000484184 DCCP43146 1447 aa19.81■□□□□ 0.76
DNMT3A-213ENST00000484184 SETD5Q9C0A6 1442 aa19.81■□□□□ 0.76
DNMT3A-213ENST00000484184 SRCAPQ6ZRS2 3230 aa19.8■□□□□ 0.76
DNMT3A-213ENST00000484184 ASXL1Q8IXJ9 1541 aa19.8■□□□□ 0.76
DNMT3A-213ENST00000484184 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
DNMT3A-213ENST00000484184 NRXN3Q9Y4C0 1643 aa19.8■□□□□ 0.76
DNMT3A-213ENST00000484184 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
DNMT3A-213ENST00000484184 NUTM2BA6NNL0 878 aaPredicted RBP19.79■□□□□ 0.76
DNMT3A-213ENST00000484184 NUTM2EB1AL46 878 aaPredicted RBP19.79■□□□□ 0.76
DNMT3A-213ENST00000484184 NUTM2AQ8IVF1 878 aaPredicted RBP19.79■□□□□ 0.76
DNMT3A-213ENST00000484184 MST1RQ04912 1400 aa19.78■□□□□ 0.76
DNMT3A-213ENST00000484184 NHSL1Q5SYE7 1610 aa19.78■□□□□ 0.76
DNMT3A-213ENST00000484184 AFF2P51816 1311 aa19.77■□□□□ 0.76
DNMT3A-213ENST00000484184 SETBP1Q9Y6X0 1596 aa19.75■□□□□ 0.75
DNMT3A-213ENST00000484184 ROCK1Q13464 1354 aa19.75■□□□□ 0.75
DNMT3A-213ENST00000484184 METP08581 1390 aa19.73■□□□□ 0.75
DNMT3A-213ENST00000484184 RGS12O14924 1447 aa19.73■□□□□ 0.75
DNMT3A-213ENST00000484184 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
DNMT3A-213ENST00000484184 LRRC59Q96AG4 307 aaKnown RBP19.72■□□□□ 0.75
DNMT3A-213ENST00000484184 NUP155O75694 1391 aa19.71■□□□□ 0.75
DNMT3A-213ENST00000484184 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
DNMT3A-213ENST00000484184 ADGRL3Q9HAR2 1447 aa19.69■□□□□ 0.74
DNMT3A-213ENST00000484184 RBM6P78332 1123 aaKnown RBP19.69■□□□□ 0.74
DNMT3A-213ENST00000484184 QTRT2Q9H974 415 aaKnown RBP19.69■□□□□ 0.74
DNMT3A-213ENST00000484184 C8orf37Q96NL8 207 aa19.67■□□□□ 0.74
DNMT3A-213ENST00000484184 NALCNQ8IZF0 1738 aa19.67■□□□□ 0.74
DNMT3A-213ENST00000484184 SPHKAPQ2M3C7 1700 aa19.65■□□□□ 0.74
DNMT3A-213ENST00000484184 LAMC1P11047 1609 aa19.65■□□□□ 0.74
DNMT3A-213ENST00000484184 NEXMIFQ5QGS0 1516 aa19.63■□□□□ 0.73
DNMT3A-213ENST00000484184 C1orf167Q5SNV9 1468 aa19.63■□□□□ 0.73
DNMT3A-213ENST00000484184 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
DNMT3A-213ENST00000484184 SOS2Q07890 1332 aaPredicted RBP19.6■□□□□ 0.73
DNMT3A-213ENST00000484184 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
DNMT3A-213ENST00000484184 NGLY1Q96IV0 654 aa19.6■□□□□ 0.73
DNMT3A-213ENST00000484184 CLTCL1P53675 1640 aa19.58■□□□□ 0.73
DNMT3A-213ENST00000484184 ORAI2Q96SN7 254 aa19.58■□□□□ 0.72
DNMT3A-213ENST00000484184 EP400Q96L91 3159 aa19.58■□□□□ 0.72
DNMT3A-213ENST00000484184 PTCH1Q13635 1447 aa19.57■□□□□ 0.72
DNMT3A-213ENST00000484184 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
DNMT3A-213ENST00000484184 FNBP4Q8N3X1 1017 aaPredicted RBP19.56■□□□□ 0.72
DNMT3A-213ENST00000484184 ITGAEP38570 1179 aa19.55■□□□□ 0.72
DNMT3A-213ENST00000484184 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
DNMT3A-213ENST00000484184 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
DNMT3A-213ENST00000484184 USP21Q9UK80 565 aa19.54■□□□□ 0.72
DNMT3A-213ENST00000484184 ATRNO75882 1429 aa19.53■□□□□ 0.72
DNMT3A-213ENST00000484184 TRPC5Q9UL62 973 aaPredicted RBP19.53■□□□□ 0.72
DNMT3A-213ENST00000484184 COL22A1Q8NFW1 1626 aaPredicted RBP19.52■□□□□ 0.72
DNMT3A-213ENST00000484184 MYOM2P54296 1465 aa19.5■□□□□ 0.71
DNMT3A-213ENST00000484184 KIF1BO60333 1816 aa19.5■□□□□ 0.71
DNMT3A-213ENST00000484184 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
DNMT3A-213ENST00000484184 VGFO15240 615 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms