RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
SHROOM4-204ENST00000483955 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
SHROOM4-204ENST00000483955 KDM4FA0A1W2PPD8 638 aa13.01□□□□□ -0.33
SHROOM4-204ENST00000483955 IDI1Q13907 227 aa13.01□□□□□ -0.33
SHROOM4-204ENST00000483955 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
SHROOM4-204ENST00000483955 ZNF142P52746 1687 aaPredicted RBP13□□□□□ -0.33
SHROOM4-204ENST00000483955 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
SHROOM4-204ENST00000483955 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
SHROOM4-204ENST00000483955 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
SHROOM4-204ENST00000483955 UHRF1BP1Q6BDS2 1440 aa12.99□□□□□ -0.33
SHROOM4-204ENST00000483955 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
SHROOM4-204ENST00000483955 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
SHROOM4-204ENST00000483955 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
SHROOM4-204ENST00000483955 UBR1Q8IWV7 1749 aa12.98□□□□□ -0.33
SHROOM4-204ENST00000483955 RPGRIP1LQ68CZ1 1315 aa12.97□□□□□ -0.33
SHROOM4-204ENST00000483955 MYOM2P54296 1465 aa12.97□□□□□ -0.33
SHROOM4-204ENST00000483955 IFT172Q9UG01 1749 aa12.96□□□□□ -0.33
SHROOM4-204ENST00000483955 RGL3Q3MIN7 710 aa12.96□□□□□ -0.33
SHROOM4-204ENST00000483955 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.33
SHROOM4-204ENST00000483955 L3MBTL2Q969R5 705 aa12.96□□□□□ -0.33
SHROOM4-204ENST00000483955 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
SHROOM4-204ENST00000483955 NEXMIFQ5QGS0 1516 aa12.95□□□□□ -0.34
SHROOM4-204ENST00000483955 PPLO60437 1756 aa12.94□□□□□ -0.34
SHROOM4-204ENST00000483955 DSG3P32926 999 aa12.94□□□□□ -0.34
SHROOM4-204ENST00000483955 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
SHROOM4-204ENST00000483955 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
SHROOM4-204ENST00000483955 SLIT1O75093 1534 aa12.93□□□□□ -0.34
SHROOM4-204ENST00000483955 ZFYVE9O95405 1425 aa12.92□□□□□ -0.34
SHROOM4-204ENST00000483955 THEMISQ8N1K5 641 aaPredicted RBP12.92□□□□□ -0.34
SHROOM4-204ENST00000483955 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.92□□□□□ -0.34
SHROOM4-204ENST00000483955 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
SHROOM4-204ENST00000483955 RIMS2Q9UQ26 1411 aa12.92□□□□□ -0.34
SHROOM4-204ENST00000483955 TMEM2Q9UHN6 1383 aa12.92□□□□□ -0.34
SHROOM4-204ENST00000483955 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
SHROOM4-204ENST00000483955 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
SHROOM4-204ENST00000483955 PPP1R15AO75807 674 aaPredicted RBP12.91□□□□□ -0.34
SHROOM4-204ENST00000483955 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
SHROOM4-204ENST00000483955 PRAG1Q86YV5 1406 aa12.9□□□□□ -0.34
SHROOM4-204ENST00000483955 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
SHROOM4-204ENST00000483955 LAMC1P11047 1609 aa12.88□□□□□ -0.35
SHROOM4-204ENST00000483955 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
SHROOM4-204ENST00000483955 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
SHROOM4-204ENST00000483955 SCAF11Q99590 1463 aaKnown RBP12.88□□□□□ -0.35
SHROOM4-204ENST00000483955 RALGAPBQ86X10 1494 aa12.87□□□□□ -0.35
SHROOM4-204ENST00000483955 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
SHROOM4-204ENST00000483955 LMTK3Q96Q04 1460 aa12.86□□□□□ -0.35
SHROOM4-204ENST00000483955 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
SHROOM4-204ENST00000483955 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
SHROOM4-204ENST00000483955 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
SHROOM4-204ENST00000483955 ADGRF5Q8IZF2 1346 aa12.85□□□□□ -0.35
SHROOM4-204ENST00000483955 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
SHROOM4-204ENST00000483955 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
SHROOM4-204ENST00000483955 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
SHROOM4-204ENST00000483955 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
SHROOM4-204ENST00000483955 DIP2AQ14689 1571 aa12.83□□□□□ -0.36
SHROOM4-204ENST00000483955 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
SHROOM4-204ENST00000483955 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
SHROOM4-204ENST00000483955 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
SHROOM4-204ENST00000483955 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
SHROOM4-204ENST00000483955 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
SHROOM4-204ENST00000483955 NRXN3Q9Y4C0 1643 aa12.81□□□□□ -0.36
SHROOM4-204ENST00000483955 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
SHROOM4-204ENST00000483955 MED14O60244 1454 aa12.81□□□□□ -0.36
SHROOM4-204ENST00000483955 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
SHROOM4-204ENST00000483955 CAPN15O75808 1086 aa12.8□□□□□ -0.36
SHROOM4-204ENST00000483955 LTKP29376 864 aa12.8□□□□□ -0.36
SHROOM4-204ENST00000483955 C14orf93Q9H972 538 aaKnown RBP12.8□□□□□ -0.36
SHROOM4-204ENST00000483955 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
SHROOM4-204ENST00000483955 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
SHROOM4-204ENST00000483955 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
SHROOM4-204ENST00000483955 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
SHROOM4-204ENST00000483955 BCANQ96GW7 911 aa12.78□□□□□ -0.36
SHROOM4-204ENST00000483955 ADAMTS13Q76LX8 1427 aa12.78□□□□□ -0.36
SHROOM4-204ENST00000483955 ADGRB1O14514 1584 aa12.77□□□□□ -0.36
SHROOM4-204ENST00000483955 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
SHROOM4-204ENST00000483955 HSPA2P54652 639 aa12.76□□□□□ -0.37
SHROOM4-204ENST00000483955 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
SHROOM4-204ENST00000483955 ASXL1Q8IXJ9 1541 aa12.76□□□□□ -0.37
SHROOM4-204ENST00000483955 PIK3R4Q99570 1358 aa12.75□□□□□ -0.37
SHROOM4-204ENST00000483955 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
SHROOM4-204ENST00000483955 USP47Q96K76 1375 aa12.74□□□□□ -0.37
SHROOM4-204ENST00000483955 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
SHROOM4-204ENST00000483955 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
SHROOM4-204ENST00000483955 YTHDC2Q9H6S0 1430 aaKnown RBP12.73□□□□□ -0.37
SHROOM4-204ENST00000483955 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
SHROOM4-204ENST00000483955 EIF4G2P78344 907 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHROOM4-204ENST00000483955 DLC1Q96QB1 1528 aa12.72□□□□□ -0.37
SHROOM4-204ENST00000483955 LRPPRCP42704 1394 aaKnown RBP12.72□□□□□ -0.37
SHROOM4-204ENST00000483955 STRCQ7RTU9 1775 aa12.72□□□□□ -0.37
SHROOM4-204ENST00000483955 TECPR2O15040 1411 aa12.71□□□□□ -0.37
SHROOM4-204ENST00000483955 METP08581 1390 aa12.71□□□□□ -0.37
SHROOM4-204ENST00000483955 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.37
SHROOM4-204ENST00000483955 CPS1P31327 1500 aa12.71□□□□□ -0.38
SHROOM4-204ENST00000483955 ARHGEF28Q8N1W1 1705 aaKnown RBP12.71□□□□□ -0.38
SHROOM4-204ENST00000483955 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
SHROOM4-204ENST00000483955 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
SHROOM4-204ENST00000483955 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
SHROOM4-204ENST00000483955 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
SHROOM4-204ENST00000483955 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
SHROOM4-204ENST00000483955 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms