RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SOCS7O14512 581 aa27.66■■■□□ 2.02
ATG4B-221ENST00000483778 KCNA6P17658 529 aa27.65■■■□□ 2.02
ATG4B-221ENST00000483778 IQGAP3Q86VI3 1631 aa27.64■■■□□ 2.02
ATG4B-221ENST00000483778 ZFYVE9O95405 1425 aa27.64■■■□□ 2.02
ATG4B-221ENST00000483778 MED1Q15648 1581 aaPredicted RBP27.63■■■□□ 2.01
ATG4B-221ENST00000483778 BCANQ96GW7 911 aa27.61■■■□□ 2.01
ATG4B-221ENST00000483778 NUP155O75694 1391 aa27.6■■■□□ 2.01
ATG4B-221ENST00000483778 TMEM94Q12767 1356 aa27.6■■■□□ 2.01
ATG4B-221ENST00000483778 RIMS2Q9UQ26 1411 aa27.6■■■□□ 2.01
ATG4B-221ENST00000483778 CHGAP10645 457 aaKnown RBP27.6■■■□□ 2.01
ATG4B-221ENST00000483778 PROSER2Q86WR7 435 aaPredicted RBP27.6■■■□□ 2.01
ATG4B-221ENST00000483778 NUTM2DQ5VT03 806 aaPredicted RBP27.59■■■□□ 2.01
ATG4B-221ENST00000483778 CHD2O14647 1828 aaKnown RBP27.57■■■□□ 2
ATG4B-221ENST00000483778 PLEKHG1Q9ULL1 1385 aa27.55■■■□□ 2
ATG4B-221ENST00000483778 NWD1Q149M9 1564 aa27.53■■■□□ 2
ATG4B-221ENST00000483778 PPP1R15AO75807 674 aaPredicted RBP27.52■■■□□ 2
ATG4B-221ENST00000483778 HDGFP51858 240 aaKnown RBP27.48■■□□□ 1.99
ATG4B-221ENST00000483778 TBX22Q9Y458 520 aa27.48■■□□□ 1.99
ATG4B-221ENST00000483778 FAM135BQ49AJ0 1406 aa27.47■■□□□ 1.99
ATG4B-221ENST00000483778 ADAMTS13Q76LX8 1427 aa27.47■■□□□ 1.99
ATG4B-221ENST00000483778 RRBP1Q9P2E9 1410 aaKnown RBP27.47■■□□□ 1.99
ATG4B-221ENST00000483778 NKTRP30414 1462 aaKnown RBP27.46■■□□□ 1.99
ATG4B-221ENST00000483778 SPHKAPQ2M3C7 1700 aa27.45■■□□□ 1.99
ATG4B-221ENST00000483778 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.45■■□□□ 1.98
ATG4B-221ENST00000483778 ROBO1Q9Y6N7 1651 aa27.44■■□□□ 1.98
ATG4B-221ENST00000483778 NAIPQ13075 1403 aa27.41■■□□□ 1.98
ATG4B-221ENST00000483778 SLAIN2Q9P270 581 aa27.38■■□□□ 1.97
ATG4B-221ENST00000483778 MSH6P52701 1360 aa27.37■■□□□ 1.97
ATG4B-221ENST00000483778 PHF23Q9BUL5 403 aaPredicted RBP27.37■■□□□ 1.97
ATG4B-221ENST00000483778 PTPRUQ92729 1446 aa27.36■■□□□ 1.97
ATG4B-221ENST00000483778 RGS17Q9UGC6 210 aaPredicted RBP27.36■■□□□ 1.97
ATG4B-221ENST00000483778 CLTCL1P53675 1640 aa27.34■■□□□ 1.97
ATG4B-221ENST00000483778 NRXN3Q9Y4C0 1643 aa27.34■■□□□ 1.97
ATG4B-221ENST00000483778 DIP2AQ14689 1571 aa27.32■■□□□ 1.96
ATG4B-221ENST00000483778 AMOTL2Q9Y2J4 779 aa27.32■■□□□ 1.96
ATG4B-221ENST00000483778 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.32■■□□□ 1.96
ATG4B-221ENST00000483778 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
ATG4B-221ENST00000483778 PIK3R4Q99570 1358 aa27.29■■□□□ 1.96
ATG4B-221ENST00000483778 PHLPP1O60346 1717 aa27.29■■□□□ 1.96
ATG4B-221ENST00000483778 TRPM2O94759 1503 aa27.28■■□□□ 1.96
ATG4B-221ENST00000483778 C14orf37Q86TY3 774 aa27.28■■□□□ 1.96
ATG4B-221ENST00000483778 TRIM52Q96A61 297 aa27.28■■□□□ 1.96
ATG4B-221ENST00000483778 KIF1BO60333 1816 aa27.27■■□□□ 1.96
ATG4B-221ENST00000483778 NCOA3Q9Y6Q9 1424 aa27.25■■□□□ 1.95
ATG4B-221ENST00000483778 METP08581 1390 aa27.25■■□□□ 1.95
ATG4B-221ENST00000483778 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
ATG4B-221ENST00000483778 C19orf44Q9H6X5 657 aa27.24■■□□□ 1.95
ATG4B-221ENST00000483778 NEXMIFQ5QGS0 1516 aa27.24■■□□□ 1.95
ATG4B-221ENST00000483778 HFM1A2PYH4 1435 aa27.24■■□□□ 1.95
ATG4B-221ENST00000483778 XRN1Q8IZH2 1706 aaKnown RBP27.23■■□□□ 1.95
ATG4B-221ENST00000483778 COL16A1Q07092 1604 aaPredicted RBP27.19■■□□□ 1.94
ATG4B-221ENST00000483778 ATF3P18847 181 aa27.18■■□□□ 1.94
ATG4B-221ENST00000483778 FOXD1Q16676 465 aa27.18■■□□□ 1.94
ATG4B-221ENST00000483778 POTEAQ6S8J7 498 aa27.18■■□□□ 1.94
ATG4B-221ENST00000483778 CADPS2Q86UW7 1296 aa27.18■■□□□ 1.94
ATG4B-221ENST00000483778 SLC4A1APQ9BWU0 796 aaKnown RBP27.18■■□□□ 1.94
ATG4B-221ENST00000483778 JCADQ9P266 1359 aa27.12■■□□□ 1.93
ATG4B-221ENST00000483778 BRINP3Q76B58 766 aa27.12■■□□□ 1.93
ATG4B-221ENST00000483778 SETD1AO15047 1707 aaKnown RBP27.11■■□□□ 1.93
ATG4B-221ENST00000483778 AHDC1Q5TGY3 1603 aaPredicted RBP27.09■■□□□ 1.93
ATG4B-221ENST00000483778 PPLO60437 1756 aa27.09■■□□□ 1.93
ATG4B-221ENST00000483778 NALCNQ8IZF0 1738 aa27.07■■□□□ 1.92
ATG4B-221ENST00000483778 VGFO15240 615 aaPredicted RBP27.06■■□□□ 1.92
ATG4B-221ENST00000483778 MST1RQ04912 1400 aa27.06■■□□□ 1.92
ATG4B-221ENST00000483778 LRP6O75581 1613 aa27.05■■□□□ 1.92
ATG4B-221ENST00000483778 DCCP43146 1447 aa27.04■■□□□ 1.92
ATG4B-221ENST00000483778 DDX17Q92841 729 aaKnown RBP27.03■■□□□ 1.92
ATG4B-221ENST00000483778 RPGRIP1LQ68CZ1 1315 aa27.02■■□□□ 1.92
ATG4B-221ENST00000483778 MPHOSPH9Q99550 1183 aa27.02■■□□□ 1.92
ATG4B-221ENST00000483778 SHPRHQ149N8 1683 aa27.01■■□□□ 1.92
ATG4B-221ENST00000483778 ASXL1Q8IXJ9 1541 aa27.01■■□□□ 1.91
ATG4B-221ENST00000483778 ADGRL3Q9HAR2 1447 aa27.01■■□□□ 1.91
ATG4B-221ENST00000483778 ROBO2Q9HCK4 1378 aa27.01■■□□□ 1.91
ATG4B-221ENST00000483778 NHSL1Q5SYE7 1610 aa26.98■■□□□ 1.91
ATG4B-221ENST00000483778 RGL3Q3MIN7 710 aa26.98■■□□□ 1.91
ATG4B-221ENST00000483778 SPATA31A6Q5VVP1 1343 aa26.97■■□□□ 1.91
ATG4B-221ENST00000483778 ADGRF5Q8IZF2 1346 aa26.97■■□□□ 1.91
ATG4B-221ENST00000483778 NUTM2BA6NNL0 878 aaPredicted RBP26.95■■□□□ 1.9
ATG4B-221ENST00000483778 NUTM2EB1AL46 878 aaPredicted RBP26.95■■□□□ 1.9
ATG4B-221ENST00000483778 NUTM2AQ8IVF1 878 aaPredicted RBP26.95■■□□□ 1.9
ATG4B-221ENST00000483778 SPATA31E1Q6ZUB1 1445 aa26.93■■□□□ 1.9
ATG4B-221ENST00000483778 PTCH1Q13635 1447 aa26.92■■□□□ 1.9
ATG4B-221ENST00000483778 MEX3CQ5U5Q3 659 aaKnown RBP26.92■■□□□ 1.9
ATG4B-221ENST00000483778 IFT172Q9UG01 1749 aa26.92■■□□□ 1.9
ATG4B-221ENST00000483778 ORAI2Q96SN7 254 aa26.91■■□□□ 1.9
ATG4B-221ENST00000483778 C1orf167Q5SNV9 1468 aa26.91■■□□□ 1.9
ATG4B-221ENST00000483778 CCDC144AA2RUR9 1427 aa26.9■■□□□ 1.9
ATG4B-221ENST00000483778 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
ATG4B-221ENST00000483778 PRAG1Q86YV5 1406 aa26.87■■□□□ 1.89
ATG4B-221ENST00000483778 TMEM132EQ6IEE7 984 aa26.86■■□□□ 1.89
ATG4B-221ENST00000483778 LRRC59Q96AG4 307 aaKnown RBP26.86■■□□□ 1.89
ATG4B-221ENST00000483778 STK26Q9P289 416 aa26.86■■□□□ 1.89
ATG4B-221ENST00000483778 WAPLQ7Z5K2 1190 aa26.84■■□□□ 1.89
ATG4B-221ENST00000483778 PNPLA6Q8IY17 1366 aa26.83■■□□□ 1.88
ATG4B-221ENST00000483778 LAMC1P11047 1609 aa26.82■■□□□ 1.88
ATG4B-221ENST00000483778 ANKRD30BQ9BXX2 1392 aa26.81■■□□□ 1.88
ATG4B-221ENST00000483778 ZNF772Q68DY9 489 aaPredicted RBP26.8■■□□□ 1.88
ATG4B-221ENST00000483778 AFF2P51816 1311 aa26.78■■□□□ 1.88
ATG4B-221ENST00000483778 PLEKHH1Q9ULM0 1364 aa26.78■■□□□ 1.88
ATG4B-221ENST00000483778 RAB3GAP2Q9H2M9 1393 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms