RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 RIMS2Q9UQ26 1411 aa32.49■■■□□ 2.79
SYPL1-206ENST00000483448 KCNA6P17658 529 aa32.47■■■□□ 2.79
SYPL1-206ENST00000483448 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.47■■■□□ 2.79
SYPL1-206ENST00000483448 NAIPQ13075 1403 aa32.46■■■□□ 2.79
SYPL1-206ENST00000483448 TRIM52Q96A61 297 aa32.46■■■□□ 2.79
SYPL1-206ENST00000483448 NUTM2DQ5VT03 806 aaPredicted RBP32.45■■■□□ 2.79
SYPL1-206ENST00000483448 TMEM131LA2VDJ0 1609 aa32.44■■■□□ 2.78
SYPL1-206ENST00000483448 HSPA1LP34931 641 aa32.44■■■□□ 2.78
SYPL1-206ENST00000483448 ZFYVE9O95405 1425 aa32.43■■■□□ 2.78
SYPL1-206ENST00000483448 MYO5BQ9ULV0 1848 aa32.43■■■□□ 2.78
SYPL1-206ENST00000483448 PROSER2Q86WR7 435 aaPredicted RBP32.43■■■□□ 2.78
SYPL1-206ENST00000483448 PLEKHG1Q9ULL1 1385 aa32.41■■■□□ 2.78
SYPL1-206ENST00000483448 RBM33Q96EV2 1170 aaKnown RBP32.36■■■□□ 2.77
SYPL1-206ENST00000483448 ZNF326Q5BKZ1 582 aaKnown RBP32.35■■■□□ 2.77
SYPL1-206ENST00000483448 HFM1A2PYH4 1435 aa32.34■■■□□ 2.77
SYPL1-206ENST00000483448 TMEM94Q12767 1356 aa32.34■■■□□ 2.77
SYPL1-206ENST00000483448 TBX22Q9Y458 520 aa32.33■■■□□ 2.77
SYPL1-206ENST00000483448 ALKQ9UM73 1620 aa32.33■■■□□ 2.77
SYPL1-206ENST00000483448 SPHKAPQ2M3C7 1700 aa32.29■■■□□ 2.76
SYPL1-206ENST00000483448 SLC4A1APQ9BWU0 796 aaKnown RBP32.29■■■□□ 2.76
SYPL1-206ENST00000483448 XIRP1Q702N8 1843 aaKnown RBP32.26■■■□□ 2.75
SYPL1-206ENST00000483448 NKTRP30414 1462 aaKnown RBP32.23■■■□□ 2.75
SYPL1-206ENST00000483448 NWD1Q149M9 1564 aa32.21■■■□□ 2.75
SYPL1-206ENST00000483448 ADAMTS13Q76LX8 1427 aa32.21■■■□□ 2.75
SYPL1-206ENST00000483448 ILDR2Q71H61 639 aa32.2■■■□□ 2.75
SYPL1-206ENST00000483448 MSH6P52701 1360 aa32.19■■■□□ 2.74
SYPL1-206ENST00000483448 C14orf37Q86TY3 774 aa32.19■■■□□ 2.74
SYPL1-206ENST00000483448 CHD2O14647 1828 aaKnown RBP32.18■■■□□ 2.74
SYPL1-206ENST00000483448 TRPM2O94759 1503 aa32.17■■■□□ 2.74
SYPL1-206ENST00000483448 CLTCL1P53675 1640 aa32.16■■■□□ 2.74
SYPL1-206ENST00000483448 AMOTL2Q9Y2J4 779 aa32.15■■■□□ 2.74
SYPL1-206ENST00000483448 PIK3R4Q99570 1358 aa32.15■■■□□ 2.74
SYPL1-206ENST00000483448 DIP2AQ14689 1571 aa32.15■■■□□ 2.74
SYPL1-206ENST00000483448 FOXD1Q16676 465 aa32.13■■■□□ 2.73
SYPL1-206ENST00000483448 FAM135BQ49AJ0 1406 aa32.12■■■□□ 2.73
SYPL1-206ENST00000483448 SLAIN2Q9P270 581 aa32.1■■■□□ 2.73
SYPL1-206ENST00000483448 KIF1BO60333 1816 aa32.08■■■□□ 2.73
SYPL1-206ENST00000483448 MPHOSPH9Q99550 1183 aa32.07■■■□□ 2.72
SYPL1-206ENST00000483448 VGFO15240 615 aaPredicted RBP32.05■■■□□ 2.72
SYPL1-206ENST00000483448 PTPRUQ92729 1446 aa32.05■■■□□ 2.72
SYPL1-206ENST00000483448 NCOA3Q9Y6Q9 1424 aa32.05■■■□□ 2.72
SYPL1-206ENST00000483448 C19orf44Q9H6X5 657 aa32.04■■■□□ 2.72
SYPL1-206ENST00000483448 MED1Q15648 1581 aaPredicted RBP32.03■■■□□ 2.72
SYPL1-206ENST00000483448 ATF3P18847 181 aa32.03■■■□□ 2.72
SYPL1-206ENST00000483448 PHF23Q9BUL5 403 aaPredicted RBP32.03■■■□□ 2.72
SYPL1-206ENST00000483448 NEXMIFQ5QGS0 1516 aa32.03■■■□□ 2.72
SYPL1-206ENST00000483448 SETBP1Q9Y6X0 1596 aa32.02■■■□□ 2.72
SYPL1-206ENST00000483448 RPGRIP1LQ68CZ1 1315 aa32.01■■■□□ 2.72
SYPL1-206ENST00000483448 METP08581 1390 aa32.01■■■□□ 2.71
SYPL1-206ENST00000483448 CADPS2Q86UW7 1296 aa32■■■□□ 2.71
SYPL1-206ENST00000483448 ROBO1Q9Y6N7 1651 aa31.99■■■□□ 2.71
SYPL1-206ENST00000483448 NRXN3Q9Y4C0 1643 aa31.99■■■□□ 2.71
SYPL1-206ENST00000483448 SETD5Q9C0A6 1442 aa31.99■■■□□ 2.71
SYPL1-206ENST00000483448 ACIN1Q9UKV3 1341 aaKnown RBP31.99■■■□□ 2.71
SYPL1-206ENST00000483448 CCDC144AA2RUR9 1427 aa31.95■■■□□ 2.71
SYPL1-206ENST00000483448 RGL3Q3MIN7 710 aa31.95■■■□□ 2.71
SYPL1-206ENST00000483448 SOCS7O14512 581 aa31.94■■■□□ 2.7
SYPL1-206ENST00000483448 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.9■■■□□ 2.7
SYPL1-206ENST00000483448 XRN1Q8IZH2 1706 aaKnown RBP31.87■■■□□ 2.69
SYPL1-206ENST00000483448 RAB3GAP2Q9H2M9 1393 aa31.85■■■□□ 2.69
SYPL1-206ENST00000483448 PHLPP1O60346 1717 aa31.82■■■□□ 2.68
SYPL1-206ENST00000483448 PPLO60437 1756 aa31.81■■■□□ 2.68
SYPL1-206ENST00000483448 ADGRF5Q8IZF2 1346 aa31.8■■■□□ 2.68
SYPL1-206ENST00000483448 DCCP43146 1447 aa31.79■■■□□ 2.68
SYPL1-206ENST00000483448 BRINP3Q76B58 766 aa31.78■■■□□ 2.68
SYPL1-206ENST00000483448 SPATA31E1Q6ZUB1 1445 aa31.77■■■□□ 2.68
SYPL1-206ENST00000483448 ANKRD30BQ9BXX2 1392 aa31.77■■■□□ 2.68
SYPL1-206ENST00000483448 JCADQ9P266 1359 aa31.77■■■□□ 2.68
SYPL1-206ENST00000483448 ADGRL3Q9HAR2 1447 aa31.75■■■□□ 2.67
SYPL1-206ENST00000483448 ROBO2Q9HCK4 1378 aa31.73■■■□□ 2.67
SYPL1-206ENST00000483448 STK26Q9P289 416 aa31.72■■■□□ 2.67
SYPL1-206ENST00000483448 MST1RQ04912 1400 aa31.71■■■□□ 2.67
SYPL1-206ENST00000483448 PTCH1Q13635 1447 aa31.71■■■□□ 2.67
SYPL1-206ENST00000483448 SETD1AO15047 1707 aaKnown RBP31.7■■■□□ 2.67
SYPL1-206ENST00000483448 RGS17Q9UGC6 210 aaPredicted RBP31.69■■■□□ 2.66
SYPL1-206ENST00000483448 TMEM132EQ6IEE7 984 aa31.67■■■□□ 2.66
SYPL1-206ENST00000483448 COL16A1Q07092 1604 aaPredicted RBP31.67■■■□□ 2.66
SYPL1-206ENST00000483448 AHDC1Q5TGY3 1603 aaPredicted RBP31.66■■■□□ 2.66
SYPL1-206ENST00000483448 NALCNQ8IZF0 1738 aa31.64■■■□□ 2.66
SYPL1-206ENST00000483448 HRCP23327 699 aa31.64■■■□□ 2.66
SYPL1-206ENST00000483448 ASXL1Q8IXJ9 1541 aa31.64■■■□□ 2.66
SYPL1-206ENST00000483448 MEX3CQ5U5Q3 659 aaKnown RBP31.63■■■□□ 2.65
SYPL1-206ENST00000483448 SPATA31A6Q5VVP1 1343 aa31.62■■■□□ 2.65
SYPL1-206ENST00000483448 DDX17Q92841 729 aaKnown RBP31.62■■■□□ 2.65
SYPL1-206ENST00000483448 IFT172Q9UG01 1749 aa31.61■■■□□ 2.65
SYPL1-206ENST00000483448 WAPLQ7Z5K2 1190 aa31.6■■■□□ 2.65
SYPL1-206ENST00000483448 PRAG1Q86YV5 1406 aa31.59■■■□□ 2.65
SYPL1-206ENST00000483448 C1orf167Q5SNV9 1468 aa31.59■■■□□ 2.65
SYPL1-206ENST00000483448 PIK3C2GO75747 1445 aa31.58■■■□□ 2.65
SYPL1-206ENST00000483448 LRPPRCP42704 1394 aaKnown RBP31.58■■■□□ 2.65
SYPL1-206ENST00000483448 NUTM2BA6NNL0 878 aaPredicted RBP31.58■■■□□ 2.65
SYPL1-206ENST00000483448 NUTM2EB1AL46 878 aaPredicted RBP31.58■■■□□ 2.65
SYPL1-206ENST00000483448 NUTM2AQ8IVF1 878 aaPredicted RBP31.58■■■□□ 2.65
SYPL1-206ENST00000483448 LRRC59Q96AG4 307 aaKnown RBP31.58■■■□□ 2.65
SYPL1-206ENST00000483448 ORAI2Q96SN7 254 aa31.57■■■□□ 2.64
SYPL1-206ENST00000483448 CFAP70Q5T0N1 1121 aa31.56■■■□□ 2.64
SYPL1-206ENST00000483448 POTEAQ6S8J7 498 aa31.56■■■□□ 2.64
SYPL1-206ENST00000483448 C14orf93Q9H972 538 aaKnown RBP31.56■■■□□ 2.64
SYPL1-206ENST00000483448 ABCC11Q96J66 1382 aa31.55■■■□□ 2.64
SYPL1-206ENST00000483448 KDM2AQ9Y2K7 1162 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms