RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 COL16A1Q07092 1604 aaPredicted RBP28.39■■■□□ 2.13
TNFSF13-208ENST00000483039 PTPN23Q9H3S7 1636 aa28.38■■■□□ 2.13
TNFSF13-208ENST00000483039 CHD2O14647 1828 aaKnown RBP28.38■■■□□ 2.13
TNFSF13-208ENST00000483039 SPATA31A6Q5VVP1 1343 aa28.37■■■□□ 2.13
TNFSF13-208ENST00000483039 FGD6Q6ZV73 1430 aa28.35■■■□□ 2.13
TNFSF13-208ENST00000483039 ANKRD30AQ9BXX3 1397 aa28.35■■■□□ 2.13
TNFSF13-208ENST00000483039 ZNF772Q68DY9 489 aaPredicted RBP28.34■■■□□ 2.13
TNFSF13-208ENST00000483039 UPF1Q92900 1129 aaKnown RBP eCLIP28.34■■■□□ 2.13
TNFSF13-208ENST00000483039 PLEKHG1Q9ULL1 1385 aa28.34■■■□□ 2.13
TNFSF13-208ENST00000483039 NCOA3Q9Y6Q9 1424 aa28.34■■■□□ 2.13
TNFSF13-208ENST00000483039 LRP6O75581 1613 aa28.32■■■□□ 2.12
TNFSF13-208ENST00000483039 ZFYVE9O95405 1425 aa28.32■■■□□ 2.12
TNFSF13-208ENST00000483039 HDGFP51858 240 aaKnown RBP28.3■■■□□ 2.12
TNFSF13-208ENST00000483039 MEX3CQ5U5Q3 659 aaKnown RBP28.3■■■□□ 2.12
TNFSF13-208ENST00000483039 CHIC2Q9UKJ5 165 aa28.29■■■□□ 2.12
TNFSF13-208ENST00000483039 RPRD2Q5VT52 1461 aaKnown RBP28.28■■■□□ 2.12
TNFSF13-208ENST00000483039 TBX22Q9Y458 520 aa28.28■■■□□ 2.12
TNFSF13-208ENST00000483039 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
TNFSF13-208ENST00000483039 PPP1R15AO75807 674 aaPredicted RBP28.27■■■□□ 2.12
TNFSF13-208ENST00000483039 RIMS2Q9UQ26 1411 aa28.26■■■□□ 2.12
TNFSF13-208ENST00000483039 TRIM52Q96A61 297 aa28.26■■■□□ 2.11
TNFSF13-208ENST00000483039 SHPRHQ149N8 1683 aa28.26■■■□□ 2.11
TNFSF13-208ENST00000483039 AHDC1Q5TGY3 1603 aaPredicted RBP28.25■■■□□ 2.11
TNFSF13-208ENST00000483039 C14orf37Q86TY3 774 aa28.24■■■□□ 2.11
TNFSF13-208ENST00000483039 CADPS2Q86UW7 1296 aa28.24■■■□□ 2.11
TNFSF13-208ENST00000483039 GCC2Q8IWJ2 1684 aa28.23■■■□□ 2.11
TNFSF13-208ENST00000483039 C19orf44Q9H6X5 657 aa28.22■■■□□ 2.11
TNFSF13-208ENST00000483039 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.21■■■□□ 2.11
TNFSF13-208ENST00000483039 RXRBP28702 533 aa28.21■■■□□ 2.11
TNFSF13-208ENST00000483039 TMEM131LA2VDJ0 1609 aa28.21■■■□□ 2.11
TNFSF13-208ENST00000483039 ATF3P18847 181 aa28.19■■■□□ 2.1
TNFSF13-208ENST00000483039 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.19■■■□□ 2.1
TNFSF13-208ENST00000483039 ADGRL2O95490 1459 aa28.18■■■□□ 2.1
TNFSF13-208ENST00000483039 CDK12Q9NYV4 1490 aaPredicted RBP28.17■■■□□ 2.1
TNFSF13-208ENST00000483039 PIK3R4Q99570 1358 aa28.17■■■□□ 2.1
TNFSF13-208ENST00000483039 ADAMTS13Q76LX8 1427 aa28.17■■■□□ 2.1
TNFSF13-208ENST00000483039 LOC105371045A0A1W2PR82 267 aa28.16■■■□□ 2.1
TNFSF13-208ENST00000483039 APLP2Q06481 763 aa28.16■■■□□ 2.1
TNFSF13-208ENST00000483039 DIP2AQ14689 1571 aa28.16■■■□□ 2.1
TNFSF13-208ENST00000483039 ANKRD50Q9ULJ7 1429 aa28.12■■■□□ 2.09
TNFSF13-208ENST00000483039 BRINP3Q76B58 766 aa28.11■■■□□ 2.09
TNFSF13-208ENST00000483039 NUTM2BA6NNL0 878 aaPredicted RBP28.1■■■□□ 2.09
TNFSF13-208ENST00000483039 NUTM2EB1AL46 878 aaPredicted RBP28.1■■■□□ 2.09
TNFSF13-208ENST00000483039 CHGAP10645 457 aaKnown RBP28.1■■■□□ 2.09
TNFSF13-208ENST00000483039 NUTM2AQ8IVF1 878 aaPredicted RBP28.1■■■□□ 2.09
TNFSF13-208ENST00000483039 NUTM2DQ5VT03 806 aaPredicted RBP28.07■■■□□ 2.08
TNFSF13-208ENST00000483039 AFF2P51816 1311 aa28.07■■■□□ 2.08
TNFSF13-208ENST00000483039 AMOTL2Q9Y2J4 779 aa28.06■■■□□ 2.08
TNFSF13-208ENST00000483039 DCCP43146 1447 aa28.06■■■□□ 2.08
TNFSF13-208ENST00000483039 TRPM2O94759 1503 aa28.06■■■□□ 2.08
TNFSF13-208ENST00000483039 SETD5Q9C0A6 1442 aa28.05■■■□□ 2.08
TNFSF13-208ENST00000483039 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
TNFSF13-208ENST00000483039 PTPRUQ92729 1446 aa28.02■■■□□ 2.08
TNFSF13-208ENST00000483039 UNC13BO14795 1591 aa28■■■□□ 2.07
TNFSF13-208ENST00000483039 E9PCH4 1651 aa28■■■□□ 2.07
TNFSF13-208ENST00000483039 NHSL1Q5SYE7 1610 aa28■■■□□ 2.07
TNFSF13-208ENST00000483039 LRRC59Q96AG4 307 aaKnown RBP27.99■■■□□ 2.07
TNFSF13-208ENST00000483039 RBM6P78332 1123 aaKnown RBP27.97■■■□□ 2.07
TNFSF13-208ENST00000483039 FAM50AQ14320 339 aaKnown RBP27.97■■■□□ 2.07
TNFSF13-208ENST00000483039 RGS12O14924 1447 aa27.97■■■□□ 2.07
TNFSF13-208ENST00000483039 MST1RQ04912 1400 aa27.97■■■□□ 2.07
TNFSF13-208ENST00000483039 QTRT2Q9H974 415 aaKnown RBP27.96■■■□□ 2.07
TNFSF13-208ENST00000483039 XRN1Q8IZH2 1706 aaKnown RBP27.95■■■□□ 2.06
TNFSF13-208ENST00000483039 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
TNFSF13-208ENST00000483039 PNPLA6Q8IY17 1366 aa27.91■■■□□ 2.06
TNFSF13-208ENST00000483039 IQGAP3Q86VI3 1631 aa27.89■■■□□ 2.06
TNFSF13-208ENST00000483039 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.06
TNFSF13-208ENST00000483039 SETBP1Q9Y6X0 1596 aa27.88■■■□□ 2.05
TNFSF13-208ENST00000483039 NGLY1Q96IV0 654 aa27.86■■■□□ 2.05
TNFSF13-208ENST00000483039 DDX17Q92841 729 aaKnown RBP27.85■■■□□ 2.05
TNFSF13-208ENST00000483039 ADGRL3Q9HAR2 1447 aa27.84■■■□□ 2.05
TNFSF13-208ENST00000483039 METP08581 1390 aa27.82■■■□□ 2.04
TNFSF13-208ENST00000483039 ATAD2Q6PL18 1390 aa27.82■■■□□ 2.04
TNFSF13-208ENST00000483039 ADAMTS2O95450 1211 aa27.8■■■□□ 2.04
TNFSF13-208ENST00000483039 NUP155O75694 1391 aa27.8■■■□□ 2.04
TNFSF13-208ENST00000483039 ROCK1Q13464 1354 aa27.8■■■□□ 2.04
TNFSF13-208ENST00000483039 SRCAPQ6ZRS2 3230 aa27.79■■■□□ 2.04
TNFSF13-208ENST00000483039 NALCNQ8IZF0 1738 aa27.78■■■□□ 2.04
TNFSF13-208ENST00000483039 FOXD1Q16676 465 aa27.78■■■□□ 2.04
TNFSF13-208ENST00000483039 LAMC1P11047 1609 aa27.77■■■□□ 2.04
TNFSF13-208ENST00000483039 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
TNFSF13-208ENST00000483039 USP21Q9UK80 565 aa27.75■■■□□ 2.03
TNFSF13-208ENST00000483039 TRPC5Q9UL62 973 aaPredicted RBP27.75■■■□□ 2.03
TNFSF13-208ENST00000483039 C1orf167Q5SNV9 1468 aa27.75■■■□□ 2.03
TNFSF13-208ENST00000483039 ZRANB1Q9UGI0 708 aa27.73■■■□□ 2.03
TNFSF13-208ENST00000483039 SPHKAPQ2M3C7 1700 aa27.72■■■□□ 2.03
TNFSF13-208ENST00000483039 SOS2Q07890 1332 aaPredicted RBP27.72■■■□□ 2.03
TNFSF13-208ENST00000483039 PTCH1Q13635 1447 aa27.71■■■□□ 2.03
TNFSF13-208ENST00000483039 FNBP4Q8N3X1 1017 aaPredicted RBP27.71■■■□□ 2.03
TNFSF13-208ENST00000483039 ORAI2Q96SN7 254 aa27.67■■■□□ 2.02
TNFSF13-208ENST00000483039 NEXMIFQ5QGS0 1516 aa27.67■■■□□ 2.02
TNFSF13-208ENST00000483039 ATRNO75882 1429 aa27.67■■■□□ 2.02
TNFSF13-208ENST00000483039 CCDC125Q86Z20 511 aa27.66■■■□□ 2.02
TNFSF13-208ENST00000483039 COL22A1Q8NFW1 1626 aaPredicted RBP27.63■■■□□ 2.01
TNFSF13-208ENST00000483039 CLTCL1P53675 1640 aa27.59■■■□□ 2.01
TNFSF13-208ENST00000483039 ROBO2Q9HCK4 1378 aa27.59■■■□□ 2.01
TNFSF13-208ENST00000483039 MYOM2P54296 1465 aa27.57■■■□□ 2
TNFSF13-208ENST00000483039 KIF1BO60333 1816 aa27.56■■■□□ 2
TNFSF13-208ENST00000483039 PRAG1Q86YV5 1406 aa27.56■■■□□ 2
TNFSF13-208ENST00000483039 BCL9LQ86UU0 1499 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms