RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
VARS-225ENST00000482996 SPHKAPQ2M3C7 1700 aa20.77■□□□□ 0.92
VARS-225ENST00000482996 SLC26A8Q96RN1 970 aa20.76■□□□□ 0.91
VARS-225ENST00000482996 PLEKHG1Q9ULL1 1385 aa20.75■□□□□ 0.91
VARS-225ENST00000482996 TOM1O60784 492 aa20.74■□□□□ 0.91
VARS-225ENST00000482996 LRRC7Q96NW7 1537 aa20.73■□□□□ 0.91
VARS-225ENST00000482996 STRCP1A6NGW2 1772 aa20.73■□□□□ 0.91
VARS-225ENST00000482996 KCNA6P17658 529 aa20.72■□□□□ 0.91
VARS-225ENST00000482996 TRPM2O94759 1503 aa20.72■□□□□ 0.91
VARS-225ENST00000482996 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
VARS-225ENST00000482996 ZNF326Q5BKZ1 582 aaKnown RBP20.71■□□□□ 0.91
VARS-225ENST00000482996 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
VARS-225ENST00000482996 NUTM2DQ5VT03 806 aaPredicted RBP20.7■□□□□ 0.9
VARS-225ENST00000482996 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
VARS-225ENST00000482996 TBX22Q9Y458 520 aa20.68■□□□□ 0.9
VARS-225ENST00000482996 SETD5Q9C0A6 1442 aa20.68■□□□□ 0.9
VARS-225ENST00000482996 PIP4K2BP78356 416 aa20.67■□□□□ 0.9
VARS-225ENST00000482996 CLTCL1P53675 1640 aa20.67■□□□□ 0.9
VARS-225ENST00000482996 PROSER2Q86WR7 435 aaPredicted RBP20.65■□□□□ 0.9
VARS-225ENST00000482996 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.89
VARS-225ENST00000482996 NKTRP30414 1462 aaKnown RBP20.63■□□□□ 0.89
VARS-225ENST00000482996 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
VARS-225ENST00000482996 ADAMTS13Q76LX8 1427 aa20.62■□□□□ 0.89
VARS-225ENST00000482996 KIF1BO60333 1816 aa20.62■□□□□ 0.89
VARS-225ENST00000482996 TMEM94Q12767 1356 aa20.62■□□□□ 0.89
VARS-225ENST00000482996 FOXD1Q16676 465 aa20.62■□□□□ 0.89
VARS-225ENST00000482996 NWD1Q149M9 1564 aa20.62■□□□□ 0.89
VARS-225ENST00000482996 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
VARS-225ENST00000482996 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
VARS-225ENST00000482996 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
VARS-225ENST00000482996 RPGRIP1LQ68CZ1 1315 aa20.57■□□□□ 0.88
VARS-225ENST00000482996 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
VARS-225ENST00000482996 NEXMIFQ5QGS0 1516 aa20.57■□□□□ 0.88
VARS-225ENST00000482996 XIRP1Q702N8 1843 aaKnown RBP20.56■□□□□ 0.88
VARS-225ENST00000482996 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
VARS-225ENST00000482996 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
VARS-225ENST00000482996 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
VARS-225ENST00000482996 SETBP1Q9Y6X0 1596 aa20.55■□□□□ 0.88
VARS-225ENST00000482996 HSPA1LP34931 641 aa20.55■□□□□ 0.88
VARS-225ENST00000482996 MSH6P52701 1360 aa20.54■□□□□ 0.88
VARS-225ENST00000482996 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
VARS-225ENST00000482996 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
VARS-225ENST00000482996 NRXN3Q9Y4C0 1643 aa20.51■□□□□ 0.87
VARS-225ENST00000482996 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
VARS-225ENST00000482996 HRCP23327 699 aa20.5■□□□□ 0.87
VARS-225ENST00000482996 ILDR2Q71H61 639 aa20.5■□□□□ 0.87
VARS-225ENST00000482996 DISP3Q9P2K9 1392 aa20.49■□□□□ 0.87
VARS-225ENST00000482996 PTPRUQ92729 1446 aa20.49■□□□□ 0.87
VARS-225ENST00000482996 RGL3Q3MIN7 710 aa20.48■□□□□ 0.87
VARS-225ENST00000482996 METP08581 1390 aa20.47■□□□□ 0.87
VARS-225ENST00000482996 FAM135BQ49AJ0 1406 aa20.46■□□□□ 0.87
VARS-225ENST00000482996 SPATA31E1Q6ZUB1 1445 aa20.46■□□□□ 0.87
VARS-225ENST00000482996 ANKRD30BQ9BXX2 1392 aa20.45■□□□□ 0.86
VARS-225ENST00000482996 PPLO60437 1756 aa20.44■□□□□ 0.86
VARS-225ENST00000482996 C19orf44Q9H6X5 657 aa20.44■□□□□ 0.86
VARS-225ENST00000482996 CADPS2Q86UW7 1296 aa20.43■□□□□ 0.86
VARS-225ENST00000482996 SLAIN2Q9P270 581 aa20.43■□□□□ 0.86
VARS-225ENST00000482996 XRN1Q8IZH2 1706 aaKnown RBP20.43■□□□□ 0.86
VARS-225ENST00000482996 ATF3P18847 181 aa20.42■□□□□ 0.86
VARS-225ENST00000482996 SOCS7O14512 581 aa20.41■□□□□ 0.86
VARS-225ENST00000482996 ADGRF5Q8IZF2 1346 aa20.4■□□□□ 0.86
VARS-225ENST00000482996 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
VARS-225ENST00000482996 ROBO1Q9Y6N7 1651 aa20.37■□□□□ 0.85
VARS-225ENST00000482996 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
VARS-225ENST00000482996 DCCP43146 1447 aa20.36■□□□□ 0.85
VARS-225ENST00000482996 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
VARS-225ENST00000482996 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
VARS-225ENST00000482996 ADGRL3Q9HAR2 1447 aa20.34■□□□□ 0.85
VARS-225ENST00000482996 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
VARS-225ENST00000482996 PRAG1Q86YV5 1406 aa20.32■□□□□ 0.84
VARS-225ENST00000482996 ROBO2Q9HCK4 1378 aa20.32■□□□□ 0.84
VARS-225ENST00000482996 MYOM2P54296 1465 aa20.3■□□□□ 0.84
VARS-225ENST00000482996 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
VARS-225ENST00000482996 STK26Q9P289 416 aa20.28■□□□□ 0.84
VARS-225ENST00000482996 LRPPRCP42704 1394 aaKnown RBP20.28■□□□□ 0.84
VARS-225ENST00000482996 TMEM132EQ6IEE7 984 aa20.27■□□□□ 0.84
VARS-225ENST00000482996 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.84
VARS-225ENST00000482996 NRXN1Q9ULB1 1477 aa20.26■□□□□ 0.83
VARS-225ENST00000482996 BRINP3Q76B58 766 aa20.26■□□□□ 0.83
VARS-225ENST00000482996 MST1RQ04912 1400 aa20.26■□□□□ 0.83
VARS-225ENST00000482996 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
VARS-225ENST00000482996 NALCNQ8IZF0 1738 aa20.25■□□□□ 0.83
VARS-225ENST00000482996 ABCC11Q96J66 1382 aa20.25■□□□□ 0.83
VARS-225ENST00000482996 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
VARS-225ENST00000482996 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
VARS-225ENST00000482996 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
VARS-225ENST00000482996 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
VARS-225ENST00000482996 TECPR2O15040 1411 aa20.24■□□□□ 0.83
VARS-225ENST00000482996 YTHDC2Q9H6S0 1430 aaKnown RBP20.23■□□□□ 0.83
VARS-225ENST00000482996 KDM2AQ9Y2K7 1162 aa20.23■□□□□ 0.83
VARS-225ENST00000482996 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
VARS-225ENST00000482996 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
VARS-225ENST00000482996 JCADQ9P266 1359 aa20.22■□□□□ 0.83
VARS-225ENST00000482996 LAMC1P11047 1609 aa20.22■□□□□ 0.83
VARS-225ENST00000482996 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
VARS-225ENST00000482996 WAPLQ7Z5K2 1190 aa20.2■□□□□ 0.82
VARS-225ENST00000482996 C1orf167Q5SNV9 1468 aa20.19■□□□□ 0.82
VARS-225ENST00000482996 SIRT1Q96EB6 747 aa20.19■□□□□ 0.82
VARS-225ENST00000482996 COL16A1Q07092 1604 aaPredicted RBP20.19■□□□□ 0.82
VARS-225ENST00000482996 KNDC1Q76NI1 1749 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms