RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 RPRD2Q5VT52 1461 aaKnown RBP19.92■□□□□ 0.78
ZKSCAN1-204ENST00000482979 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
ZKSCAN1-204ENST00000482979 SLC52A1Q9NWF4 448 aa19.9■□□□□ 0.78
ZKSCAN1-204ENST00000482979 MYO5BQ9ULV0 1848 aa19.88■□□□□ 0.77
ZKSCAN1-204ENST00000482979 SLC26A8Q96RN1 970 aa19.88■□□□□ 0.77
ZKSCAN1-204ENST00000482979 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
ZKSCAN1-204ENST00000482979 ZFYVE9O95405 1425 aa19.85■□□□□ 0.77
ZKSCAN1-204ENST00000482979 E9PCH4 1651 aa19.85■□□□□ 0.77
ZKSCAN1-204ENST00000482979 TMEM131LA2VDJ0 1609 aa19.85■□□□□ 0.77
ZKSCAN1-204ENST00000482979 TMEM94Q12767 1356 aa19.85■□□□□ 0.77
ZKSCAN1-204ENST00000482979 KCNA6P17658 529 aa19.85■□□□□ 0.77
ZKSCAN1-204ENST00000482979 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.77
ZKSCAN1-204ENST00000482979 NWD1Q149M9 1564 aa19.83■□□□□ 0.77
ZKSCAN1-204ENST00000482979 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
ZKSCAN1-204ENST00000482979 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
ZKSCAN1-204ENST00000482979 PLEKHG1Q9ULL1 1385 aa19.8■□□□□ 0.76
ZKSCAN1-204ENST00000482979 NKTRP30414 1462 aaKnown RBP19.78■□□□□ 0.76
ZKSCAN1-204ENST00000482979 PROSER2Q86WR7 435 aaPredicted RBP19.78■□□□□ 0.76
ZKSCAN1-204ENST00000482979 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
ZKSCAN1-204ENST00000482979 BCANQ96GW7 911 aa19.77■□□□□ 0.76
ZKSCAN1-204ENST00000482979 NUP155O75694 1391 aa19.77■□□□□ 0.76
ZKSCAN1-204ENST00000482979 FAM135BQ49AJ0 1406 aa19.77■□□□□ 0.75
ZKSCAN1-204ENST00000482979 CHD2O14647 1828 aaKnown RBP19.76■□□□□ 0.75
ZKSCAN1-204ENST00000482979 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
ZKSCAN1-204ENST00000482979 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
ZKSCAN1-204ENST00000482979 HRCP23327 699 aa19.75■□□□□ 0.75
ZKSCAN1-204ENST00000482979 NUTM2DQ5VT03 806 aaPredicted RBP19.74■□□□□ 0.75
ZKSCAN1-204ENST00000482979 ADAMTS13Q76LX8 1427 aa19.73■□□□□ 0.75
ZKSCAN1-204ENST00000482979 ROBO1Q9Y6N7 1651 aa19.73■□□□□ 0.75
ZKSCAN1-204ENST00000482979 HDGFP51858 240 aaKnown RBP19.71■□□□□ 0.75
ZKSCAN1-204ENST00000482979 PHF23Q9BUL5 403 aaPredicted RBP19.71■□□□□ 0.75
ZKSCAN1-204ENST00000482979 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.7■□□□□ 0.74
ZKSCAN1-204ENST00000482979 TBX22Q9Y458 520 aa19.7■□□□□ 0.74
ZKSCAN1-204ENST00000482979 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
ZKSCAN1-204ENST00000482979 MSH6P52701 1360 aa19.69■□□□□ 0.74
ZKSCAN1-204ENST00000482979 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
ZKSCAN1-204ENST00000482979 DIP2AQ14689 1571 aa19.67■□□□□ 0.74
ZKSCAN1-204ENST00000482979 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
ZKSCAN1-204ENST00000482979 RGS17Q9UGC6 210 aaPredicted RBP19.66■□□□□ 0.74
ZKSCAN1-204ENST00000482979 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
ZKSCAN1-204ENST00000482979 SLAIN2Q9P270 581 aa19.64■□□□□ 0.73
ZKSCAN1-204ENST00000482979 PTPRUQ92729 1446 aa19.64■□□□□ 0.73
ZKSCAN1-204ENST00000482979 NRXN3Q9Y4C0 1643 aa19.64■□□□□ 0.73
ZKSCAN1-204ENST00000482979 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
ZKSCAN1-204ENST00000482979 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
ZKSCAN1-204ENST00000482979 PIK3R4Q99570 1358 aa19.62■□□□□ 0.73
ZKSCAN1-204ENST00000482979 NCOA3Q9Y6Q9 1424 aa19.62■□□□□ 0.73
ZKSCAN1-204ENST00000482979 TRPM2O94759 1503 aa19.61■□□□□ 0.73
ZKSCAN1-204ENST00000482979 PHLPP1O60346 1717 aa19.61■□□□□ 0.73
ZKSCAN1-204ENST00000482979 CLTCL1P53675 1640 aa19.61■□□□□ 0.73
ZKSCAN1-204ENST00000482979 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.6■□□□□ 0.73
ZKSCAN1-204ENST00000482979 SETBP1Q9Y6X0 1596 aa19.59■□□□□ 0.73
ZKSCAN1-204ENST00000482979 AMOTL2Q9Y2J4 779 aa19.58■□□□□ 0.72
ZKSCAN1-204ENST00000482979 XRN1Q8IZH2 1706 aaKnown RBP19.57■□□□□ 0.72
ZKSCAN1-204ENST00000482979 FOXD1Q16676 465 aa19.57■□□□□ 0.72
ZKSCAN1-204ENST00000482979 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
ZKSCAN1-204ENST00000482979 COL16A1Q07092 1604 aaPredicted RBP19.57■□□□□ 0.72
ZKSCAN1-204ENST00000482979 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
ZKSCAN1-204ENST00000482979 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
ZKSCAN1-204ENST00000482979 C19orf44Q9H6X5 657 aa19.55■□□□□ 0.72
ZKSCAN1-204ENST00000482979 METP08581 1390 aa19.54■□□□□ 0.72
ZKSCAN1-204ENST00000482979 POTEAQ6S8J7 498 aa19.52■□□□□ 0.72
ZKSCAN1-204ENST00000482979 CADPS2Q86UW7 1296 aa19.52■□□□□ 0.72
ZKSCAN1-204ENST00000482979 JCADQ9P266 1359 aa19.52■□□□□ 0.72
ZKSCAN1-204ENST00000482979 AHDC1Q5TGY3 1603 aaPredicted RBP19.51■□□□□ 0.71
ZKSCAN1-204ENST00000482979 KIF1BO60333 1816 aa19.51■□□□□ 0.71
ZKSCAN1-204ENST00000482979 ATF3P18847 181 aa19.51■□□□□ 0.71
ZKSCAN1-204ENST00000482979 DCCP43146 1447 aa19.48■□□□□ 0.71
ZKSCAN1-204ENST00000482979 LRP6O75581 1613 aa19.47■□□□□ 0.71
ZKSCAN1-204ENST00000482979 BRINP3Q76B58 766 aa19.47■□□□□ 0.71
ZKSCAN1-204ENST00000482979 SETD1AO15047 1707 aaKnown RBP19.46■□□□□ 0.71
ZKSCAN1-204ENST00000482979 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
ZKSCAN1-204ENST00000482979 MST1RQ04912 1400 aa19.45■□□□□ 0.7
ZKSCAN1-204ENST00000482979 SHPRHQ149N8 1683 aa19.44■□□□□ 0.7
ZKSCAN1-204ENST00000482979 ASXL1Q8IXJ9 1541 aa19.44■□□□□ 0.7
ZKSCAN1-204ENST00000482979 CLSPNQ9HAW4 1339 aa19.44■□□□□ 0.7
ZKSCAN1-204ENST00000482979 NALCNQ8IZF0 1738 aa19.44■□□□□ 0.7
ZKSCAN1-204ENST00000482979 ADGRL3Q9HAR2 1447 aa19.43■□□□□ 0.7
ZKSCAN1-204ENST00000482979 SIN3AQ96ST3 1273 aa19.42■□□□□ 0.7
ZKSCAN1-204ENST00000482979 SPATA31A6Q5VVP1 1343 aa19.41■□□□□ 0.7
ZKSCAN1-204ENST00000482979 CCDC144AA2RUR9 1427 aa19.41■□□□□ 0.7
ZKSCAN1-204ENST00000482979 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
ZKSCAN1-204ENST00000482979 PPLO60437 1756 aa19.4■□□□□ 0.7
ZKSCAN1-204ENST00000482979 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
ZKSCAN1-204ENST00000482979 VGFO15240 615 aaPredicted RBP19.38■□□□□ 0.69
ZKSCAN1-204ENST00000482979 PTCH1Q13635 1447 aa19.37■□□□□ 0.69
ZKSCAN1-204ENST00000482979 ROBO2Q9HCK4 1378 aa19.37■□□□□ 0.69
ZKSCAN1-204ENST00000482979 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
ZKSCAN1-204ENST00000482979 DDX17Q92841 729 aaKnown RBP19.36■□□□□ 0.69
ZKSCAN1-204ENST00000482979 PRAG1Q86YV5 1406 aa19.36■□□□□ 0.69
ZKSCAN1-204ENST00000482979 MEX3CQ5U5Q3 659 aaKnown RBP19.34■□□□□ 0.69
ZKSCAN1-204ENST00000482979 C1orf167Q5SNV9 1468 aa19.34■□□□□ 0.69
ZKSCAN1-204ENST00000482979 NUTM2BA6NNL0 878 aaPredicted RBP19.32■□□□□ 0.68
ZKSCAN1-204ENST00000482979 NUTM2EB1AL46 878 aaPredicted RBP19.32■□□□□ 0.68
ZKSCAN1-204ENST00000482979 NUTM2AQ8IVF1 878 aaPredicted RBP19.32■□□□□ 0.68
ZKSCAN1-204ENST00000482979 SPATA31E1Q6ZUB1 1445 aa19.31■□□□□ 0.68
ZKSCAN1-204ENST00000482979 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
ZKSCAN1-204ENST00000482979 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
ZKSCAN1-204ENST00000482979 LAMC1P11047 1609 aa19.29■□□□□ 0.68
ZKSCAN1-204ENST00000482979 IFT172Q9UG01 1749 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms