RNA–Protein interactions for RNA: ENST00000482681.5

PDE1C-210, Transcript of phosphodiesterase 1C, human

TSL 2

Gene PDE1C, Length 539 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1C-210	ENST00000482681	LRRC7	Q96NW7	1537 aa		18.82	■□□□□ 0.6
PDE1C-210	ENST00000482681	RIMS2	Q9UQ26	1411 aa		18.79	■□□□□ 0.6
PDE1C-210	ENST00000482681	TMEM131L	A2VDJ0	1609 aa		18.78	■□□□□ 0.6
PDE1C-210	ENST00000482681	HSPA1L	P34931	641 aa		18.76	■□□□□ 0.59
PDE1C-210	ENST00000482681	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.76	■□□□□ 0.59
PDE1C-210	ENST00000482681	TRIM52	Q96A61	297 aa		18.76	■□□□□ 0.59
PDE1C-210	ENST00000482681	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
PDE1C-210	ENST00000482681	KCNA6	P17658	529 aa		18.74	■□□□□ 0.59
PDE1C-210	ENST00000482681	SPHKAP	Q2M3C7	1700 aa		18.74	■□□□□ 0.59
PDE1C-210	ENST00000482681	ZFYVE9	O95405	1425 aa		18.74	■□□□□ 0.59
PDE1C-210	ENST00000482681	PLEKHG1	Q9ULL1	1385 aa		18.73	■□□□□ 0.59
PDE1C-210	ENST00000482681	PROSER2	Q86WR7	435 aa	Predicted RBP	18.73	■□□□□ 0.59
PDE1C-210	ENST00000482681	NAIP	Q13075	1403 aa		18.73	■□□□□ 0.59
PDE1C-210	ENST00000482681	ZNF326	Q5BKZ1	582 aa	Known RBP	18.72	■□□□□ 0.59
PDE1C-210	ENST00000482681	XIRP1	Q702N8	1843 aa	Known RBP	18.71	■□□□□ 0.59
PDE1C-210	ENST00000482681	TMEM94	Q12767	1356 aa		18.7	■□□□□ 0.58
PDE1C-210	ENST00000482681	RBM33	Q96EV2	1170 aa	Known RBP	18.7	■□□□□ 0.58
PDE1C-210	ENST00000482681	ALK	Q9UM73	1620 aa		18.68	■□□□□ 0.58
PDE1C-210	ENST00000482681	HFM1	A2PYH4	1435 aa		18.67	■□□□□ 0.58
PDE1C-210	ENST00000482681	NKTR	P30414	1462 aa	Known RBP	18.67	■□□□□ 0.58
PDE1C-210	ENST00000482681	NWD1	Q149M9	1564 aa		18.66	■□□□□ 0.58
PDE1C-210	ENST00000482681	C14orf37	Q86TY3	774 aa		18.65	■□□□□ 0.58
PDE1C-210	ENST00000482681	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.65	■□□□□ 0.58
PDE1C-210	ENST00000482681	CHD2	O14647	1828 aa	Known RBP	18.65	■□□□□ 0.58
PDE1C-210	ENST00000482681	TBX22	Q9Y458	520 aa		18.64	■□□□□ 0.57
PDE1C-210	ENST00000482681	MSH6	P52701	1360 aa		18.64	■□□□□ 0.57
PDE1C-210	ENST00000482681	DIP2A	Q14689	1571 aa		18.63	■□□□□ 0.57
PDE1C-210	ENST00000482681	KIF1B	O60333	1816 aa		18.63	■□□□□ 0.57
PDE1C-210	ENST00000482681	ILDR2	Q71H61	639 aa		18.62	■□□□□ 0.57
PDE1C-210	ENST00000482681	TRPM2	O94759	1503 aa		18.62	■□□□□ 0.57
PDE1C-210	ENST00000482681	CLTCL1	P53675	1640 aa		18.62	■□□□□ 0.57
PDE1C-210	ENST00000482681	ADAMTS13	Q76LX8	1427 aa		18.6	■□□□□ 0.57
PDE1C-210	ENST00000482681	MED1	Q15648	1581 aa	Predicted RBP	18.59	■□□□□ 0.57
PDE1C-210	ENST00000482681	PHF23	Q9BUL5	403 aa	Predicted RBP	18.58	■□□□□ 0.56
PDE1C-210	ENST00000482681	PIK3R4	Q99570	1358 aa		18.56	■□□□□ 0.56
PDE1C-210	ENST00000482681	AMOTL2	Q9Y2J4	779 aa		18.56	■□□□□ 0.56
PDE1C-210	ENST00000482681	ROBO1	Q9Y6N7	1651 aa		18.56	■□□□□ 0.56
PDE1C-210	ENST00000482681	FOXD1	Q16676	465 aa		18.55	■□□□□ 0.56
PDE1C-210	ENST00000482681	FAM135B	Q49AJ0	1406 aa		18.55	■□□□□ 0.56
PDE1C-210	ENST00000482681	NEXMIF	Q5QGS0	1516 aa		18.54	■□□□□ 0.56
PDE1C-210	ENST00000482681	ATF3	P18847	181 aa		18.53	■□□□□ 0.56
PDE1C-210	ENST00000482681	SLAIN2	Q9P270	581 aa		18.53	■□□□□ 0.56
PDE1C-210	ENST00000482681	SETBP1	Q9Y6X0	1596 aa		18.53	■□□□□ 0.56
PDE1C-210	ENST00000482681	NRXN3	Q9Y4C0	1643 aa		18.52	■□□□□ 0.55
PDE1C-210	ENST00000482681	PTPRU	Q92729	1446 aa		18.5	■□□□□ 0.55
PDE1C-210	ENST00000482681	NCOA3	Q9Y6Q9	1424 aa		18.5	■□□□□ 0.55
PDE1C-210	ENST00000482681	VGF	O15240	615 aa	Predicted RBP	18.5	■□□□□ 0.55
PDE1C-210	ENST00000482681	CADPS2	Q86UW7	1296 aa		18.5	■□□□□ 0.55
PDE1C-210	ENST00000482681	MPHOSPH9	Q99550	1183 aa		18.49	■□□□□ 0.55
PDE1C-210	ENST00000482681	C19orf44	Q9H6X5	657 aa		18.49	■□□□□ 0.55
PDE1C-210	ENST00000482681	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.49	■□□□□ 0.55
PDE1C-210	ENST00000482681	CCDC144A	A2RUR9	1427 aa		18.49	■□□□□ 0.55
PDE1C-210	ENST00000482681	MET	P08581	1390 aa		18.48	■□□□□ 0.55
PDE1C-210	ENST00000482681	PHLPP1	O60346	1717 aa		18.47	■□□□□ 0.55
PDE1C-210	ENST00000482681	SOCS7	O14512	581 aa		18.47	■□□□□ 0.55
PDE1C-210	ENST00000482681	RPGRIP1L	Q68CZ1	1315 aa		18.47	■□□□□ 0.55
PDE1C-210	ENST00000482681	XRN1	Q8IZH2	1706 aa	Known RBP	18.46	■□□□□ 0.55
PDE1C-210	ENST00000482681	SETD5	Q9C0A6	1442 aa		18.46	■□□□□ 0.55
PDE1C-210	ENST00000482681	RGL3	Q3MIN7	710 aa		18.45	■□□□□ 0.54
PDE1C-210	ENST00000482681	PPL	O60437	1756 aa		18.44	■□□□□ 0.54
PDE1C-210	ENST00000482681	ACIN1	Q9UKV3	1341 aa	Known RBP	18.44	■□□□□ 0.54
PDE1C-210	ENST00000482681	RAB3GAP2	Q9H2M9	1393 aa		18.4	■□□□□ 0.54
PDE1C-210	ENST00000482681	DCC	P43146	1447 aa		18.39	■□□□□ 0.53
PDE1C-210	ENST00000482681	JCAD	Q9P266	1359 aa		18.38	■□□□□ 0.53
PDE1C-210	ENST00000482681	ADGRL3	Q9HAR2	1447 aa		18.37	■□□□□ 0.53
PDE1C-210	ENST00000482681	SETD1A	O15047	1707 aa	Known RBP	18.37	■□□□□ 0.53
PDE1C-210	ENST00000482681	BRINP3	Q76B58	766 aa		18.36	■□□□□ 0.53
PDE1C-210	ENST00000482681	NALCN	Q8IZF0	1738 aa		18.36	■□□□□ 0.53
PDE1C-210	ENST00000482681	COL16A1	Q07092	1604 aa	Predicted RBP	18.35	■□□□□ 0.53
PDE1C-210	ENST00000482681	ANKRD30B	Q9BXX2	1392 aa		18.35	■□□□□ 0.53
PDE1C-210	ENST00000482681	ADGRF5	Q8IZF2	1346 aa		18.35	■□□□□ 0.53
PDE1C-210	ENST00000482681	PTCH1	Q13635	1447 aa		18.34	■□□□□ 0.53
PDE1C-210	ENST00000482681	SPATA31E1	Q6ZUB1	1445 aa		18.34	■□□□□ 0.53
PDE1C-210	ENST00000482681	MEX3C	Q5U5Q3	659 aa	Known RBP	18.34	■□□□□ 0.53
PDE1C-210	ENST00000482681	MST1R	Q04912	1400 aa		18.33	■□□□□ 0.53
PDE1C-210	ENST00000482681	STK26	Q9P289	416 aa		18.33	■□□□□ 0.52
PDE1C-210	ENST00000482681	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.33	■□□□□ 0.52
PDE1C-210	ENST00000482681	ASXL1	Q8IXJ9	1541 aa		18.33	■□□□□ 0.52
PDE1C-210	ENST00000482681	IFT172	Q9UG01	1749 aa		18.32	■□□□□ 0.52
PDE1C-210	ENST00000482681	ROBO2	Q9HCK4	1378 aa		18.32	■□□□□ 0.52
PDE1C-210	ENST00000482681	RGS17	Q9UGC6	210 aa	Predicted RBP	18.29	■□□□□ 0.52
PDE1C-210	ENST00000482681	SPATA31A6	Q5VVP1	1343 aa		18.28	■□□□□ 0.52
PDE1C-210	ENST00000482681	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.28	■□□□□ 0.52
PDE1C-210	ENST00000482681	NUTM2E	B1AL46	878 aa	Predicted RBP	18.28	■□□□□ 0.52
PDE1C-210	ENST00000482681	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.28	■□□□□ 0.52
PDE1C-210	ENST00000482681	TMEM132E	Q6IEE7	984 aa		18.27	■□□□□ 0.52
PDE1C-210	ENST00000482681	DDX17	Q92841	729 aa	Known RBP	18.27	■□□□□ 0.52
PDE1C-210	ENST00000482681	PIK3C2G	O75747	1445 aa		18.26	■□□□□ 0.51
PDE1C-210	ENST00000482681	SHPRH	Q149N8	1683 aa		18.26	■□□□□ 0.51
PDE1C-210	ENST00000482681	NHSL1	Q5SYE7	1610 aa		18.26	■□□□□ 0.51
PDE1C-210	ENST00000482681	C1orf167	Q5SNV9	1468 aa		18.26	■□□□□ 0.51
PDE1C-210	ENST00000482681	WAPL	Q7Z5K2	1190 aa		18.24	■□□□□ 0.51
PDE1C-210	ENST00000482681	LRRC59	Q96AG4	307 aa	Known RBP	18.24	■□□□□ 0.51
PDE1C-210	ENST00000482681	LRPPRC	P42704	1394 aa	Known RBP	18.24	■□□□□ 0.51
PDE1C-210	ENST00000482681	PRAG1	Q86YV5	1406 aa		18.23	■□□□□ 0.51
PDE1C-210	ENST00000482681	POTEA	Q6S8J7	498 aa		18.23	■□□□□ 0.51
PDE1C-210	ENST00000482681	ORAI2	Q96SN7	254 aa		18.23	■□□□□ 0.51
PDE1C-210	ENST00000482681	LRP6	O75581	1613 aa		18.23	■□□□□ 0.51
PDE1C-210	ENST00000482681	NUTM2F	A1L443	756 aa		18.22	■□□□□ 0.51
PDE1C-210	ENST00000482681	KNDC1	Q76NI1	1749 aa		18.21	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms