RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 STRCP1A6NGW2 1772 aa18.42■□□□□ 0.54
FAM3D-202ENST00000482623 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
FAM3D-202ENST00000482623 NCOA3Q9Y6Q9 1424 aa18.4■□□□□ 0.54
FAM3D-202ENST00000482623 PPP1R15AO75807 674 aaPredicted RBP18.4■□□□□ 0.54
FAM3D-202ENST00000482623 BCANQ96GW7 911 aa18.4■□□□□ 0.54
FAM3D-202ENST00000482623 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
FAM3D-202ENST00000482623 NKTRP30414 1462 aaKnown RBP18.39■□□□□ 0.54
FAM3D-202ENST00000482623 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
FAM3D-202ENST00000482623 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
FAM3D-202ENST00000482623 RRBP1Q9P2E9 1410 aaKnown RBP18.37■□□□□ 0.53
FAM3D-202ENST00000482623 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
FAM3D-202ENST00000482623 ITGAEP38570 1179 aa18.36■□□□□ 0.53
FAM3D-202ENST00000482623 TMEM131LA2VDJ0 1609 aa18.35■□□□□ 0.53
FAM3D-202ENST00000482623 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
FAM3D-202ENST00000482623 MSH6P52701 1360 aa18.33■□□□□ 0.53
FAM3D-202ENST00000482623 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
FAM3D-202ENST00000482623 SLAIN2Q9P270 581 aa18.32■□□□□ 0.52
FAM3D-202ENST00000482623 E9PCH4 1651 aa18.31■□□□□ 0.52
FAM3D-202ENST00000482623 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
FAM3D-202ENST00000482623 C19orf44Q9H6X5 657 aa18.3■□□□□ 0.52
FAM3D-202ENST00000482623 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
FAM3D-202ENST00000482623 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
FAM3D-202ENST00000482623 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
FAM3D-202ENST00000482623 DIP2AQ14689 1571 aa18.28■□□□□ 0.52
FAM3D-202ENST00000482623 NAIPQ13075 1403 aa18.27■□□□□ 0.52
FAM3D-202ENST00000482623 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
FAM3D-202ENST00000482623 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
FAM3D-202ENST00000482623 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
FAM3D-202ENST00000482623 AMOTL2Q9Y2J4 779 aa18.25■□□□□ 0.51
FAM3D-202ENST00000482623 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
FAM3D-202ENST00000482623 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
FAM3D-202ENST00000482623 RBM33Q96EV2 1170 aaKnown RBP18.23■□□□□ 0.51
FAM3D-202ENST00000482623 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
FAM3D-202ENST00000482623 ATF3P18847 181 aa18.22■□□□□ 0.51
FAM3D-202ENST00000482623 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
FAM3D-202ENST00000482623 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
FAM3D-202ENST00000482623 VGFO15240 615 aaPredicted RBP18.21■□□□□ 0.51
FAM3D-202ENST00000482623 TRPM2O94759 1503 aa18.2■□□□□ 0.5
FAM3D-202ENST00000482623 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
FAM3D-202ENST00000482623 MYO5BQ9ULV0 1848 aa18.19■□□□□ 0.5
FAM3D-202ENST00000482623 DCCP43146 1447 aa18.18■□□□□ 0.5
FAM3D-202ENST00000482623 JCADQ9P266 1359 aa18.17■□□□□ 0.5
FAM3D-202ENST00000482623 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
FAM3D-202ENST00000482623 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
FAM3D-202ENST00000482623 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
FAM3D-202ENST00000482623 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
FAM3D-202ENST00000482623 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
FAM3D-202ENST00000482623 ROBO1Q9Y6N7 1651 aa18.15■□□□□ 0.5
FAM3D-202ENST00000482623 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
FAM3D-202ENST00000482623 SPHKAPQ2M3C7 1700 aa18.15■□□□□ 0.5
FAM3D-202ENST00000482623 SPATA31A6Q5VVP1 1343 aa18.14■□□□□ 0.49
FAM3D-202ENST00000482623 METP08581 1390 aa18.12■□□□□ 0.49
FAM3D-202ENST00000482623 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
FAM3D-202ENST00000482623 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.49
FAM3D-202ENST00000482623 PRAG1Q86YV5 1406 aa18.07■□□□□ 0.48
FAM3D-202ENST00000482623 CLTCL1P53675 1640 aa18.07■□□□□ 0.48
FAM3D-202ENST00000482623 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
FAM3D-202ENST00000482623 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
FAM3D-202ENST00000482623 AHDC1Q5TGY3 1603 aaPredicted RBP18.06■□□□□ 0.48
FAM3D-202ENST00000482623 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
FAM3D-202ENST00000482623 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
FAM3D-202ENST00000482623 XRN1Q8IZH2 1706 aaKnown RBP18.05■□□□□ 0.48
FAM3D-202ENST00000482623 ADGRL3Q9HAR2 1447 aa18.05■□□□□ 0.48
FAM3D-202ENST00000482623 POTEAQ6S8J7 498 aa18.04■□□□□ 0.48
FAM3D-202ENST00000482623 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
FAM3D-202ENST00000482623 PHLPP1O60346 1717 aa18.03■□□□□ 0.48
FAM3D-202ENST00000482623 ZNF772Q68DY9 489 aaPredicted RBP18.03■□□□□ 0.48
FAM3D-202ENST00000482623 MST1RQ04912 1400 aa18.03■□□□□ 0.48
FAM3D-202ENST00000482623 SETD5Q9C0A6 1442 aa18.03■□□□□ 0.48
FAM3D-202ENST00000482623 KIF1BO60333 1816 aa18.02■□□□□ 0.48
FAM3D-202ENST00000482623 COL16A1Q07092 1604 aaPredicted RBP18.02■□□□□ 0.48
FAM3D-202ENST00000482623 ANKRD30BQ9BXX2 1392 aa18.02■□□□□ 0.47
FAM3D-202ENST00000482623 CCDC144AA2RUR9 1427 aa18.01■□□□□ 0.47
FAM3D-202ENST00000482623 ROBO2Q9HCK4 1378 aa17.97■□□□□ 0.47
FAM3D-202ENST00000482623 MEX3CQ5U5Q3 659 aaKnown RBP17.97■□□□□ 0.47
FAM3D-202ENST00000482623 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
FAM3D-202ENST00000482623 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
FAM3D-202ENST00000482623 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
FAM3D-202ENST00000482623 HRCP23327 699 aa17.96■□□□□ 0.47
FAM3D-202ENST00000482623 FOXD1Q16676 465 aa17.95■□□□□ 0.46
FAM3D-202ENST00000482623 C1orf167Q5SNV9 1468 aa17.95■□□□□ 0.46
FAM3D-202ENST00000482623 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
FAM3D-202ENST00000482623 ADGRF5Q8IZF2 1346 aa17.94■□□□□ 0.46
FAM3D-202ENST00000482623 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
FAM3D-202ENST00000482623 RGL3Q3MIN7 710 aa17.93■□□□□ 0.46
FAM3D-202ENST00000482623 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
FAM3D-202ENST00000482623 TECPR2O15040 1411 aa17.92■□□□□ 0.46
FAM3D-202ENST00000482623 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
FAM3D-202ENST00000482623 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
FAM3D-202ENST00000482623 LRP6O75581 1613 aa17.9■□□□□ 0.46
FAM3D-202ENST00000482623 C14orf93Q9H972 538 aaKnown RBP17.9■□□□□ 0.46
FAM3D-202ENST00000482623 PPLO60437 1756 aa17.89■□□□□ 0.45
FAM3D-202ENST00000482623 RXRBP28702 533 aa17.89■□□□□ 0.45
FAM3D-202ENST00000482623 ORAI2Q96SN7 254 aa17.89■□□□□ 0.45
FAM3D-202ENST00000482623 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
FAM3D-202ENST00000482623 NHSL1Q5SYE7 1610 aa17.88■□□□□ 0.45
FAM3D-202ENST00000482623 PNPLA6Q8IY17 1366 aa17.88■□□□□ 0.45
FAM3D-202ENST00000482623 LAMC1P11047 1609 aa17.87■□□□□ 0.45
FAM3D-202ENST00000482623 NUTM2BA6NNL0 878 aaPredicted RBP17.87■□□□□ 0.45
FAM3D-202ENST00000482623 NUTM2EB1AL46 878 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms