RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 IQGAP1P46940 1657 aa22.38■■□□□ 1.17
HLA-F-225ENST00000482257 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
HLA-F-225ENST00000482257 LTKP29376 864 aa22.37■■□□□ 1.17
HLA-F-225ENST00000482257 TIMELESSQ9UNS1 1208 aa22.37■■□□□ 1.17
HLA-F-225ENST00000482257 KDM5AP29375 1690 aaKnown RBP22.36■■□□□ 1.17
HLA-F-225ENST00000482257 SCAF11Q99590 1463 aaKnown RBP22.36■■□□□ 1.17
HLA-F-225ENST00000482257 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
HLA-F-225ENST00000482257 ADGRB3O60242 1522 aa22.36■■□□□ 1.17
HLA-F-225ENST00000482257 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
HLA-F-225ENST00000482257 TMEM2Q9UHN6 1383 aa22.34■■□□□ 1.17
HLA-F-225ENST00000482257 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
HLA-F-225ENST00000482257 TMEM131LA2VDJ0 1609 aa22.32■■□□□ 1.16
HLA-F-225ENST00000482257 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
HLA-F-225ENST00000482257 ZNF326Q5BKZ1 582 aaKnown RBP22.31■■□□□ 1.16
HLA-F-225ENST00000482257 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
HLA-F-225ENST00000482257 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
HLA-F-225ENST00000482257 RPGRIP1LQ68CZ1 1315 aa22.3■■□□□ 1.16
HLA-F-225ENST00000482257 MYO5BQ9ULV0 1848 aa22.29■■□□□ 1.16
HLA-F-225ENST00000482257 TXNDC2Q86VQ3 553 aa22.29■■□□□ 1.16
HLA-F-225ENST00000482257 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
HLA-F-225ENST00000482257 HDGFP51858 240 aaKnown RBP22.27■■□□□ 1.16
HLA-F-225ENST00000482257 CPS1P31327 1500 aa22.26■■□□□ 1.15
HLA-F-225ENST00000482257 L3MBTL2Q969R5 705 aa22.25■■□□□ 1.15
HLA-F-225ENST00000482257 ZFYVE9O95405 1425 aa22.24■■□□□ 1.15
HLA-F-225ENST00000482257 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
HLA-F-225ENST00000482257 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
HLA-F-225ENST00000482257 EID1Q9Y6B2 187 aa22.22■■□□□ 1.15
HLA-F-225ENST00000482257 PPLO60437 1756 aa22.22■■□□□ 1.15
HLA-F-225ENST00000482257 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
HLA-F-225ENST00000482257 VGFO15240 615 aaPredicted RBP22.2■■□□□ 1.14
HLA-F-225ENST00000482257 RIMS2Q9UQ26 1411 aa22.2■■□□□ 1.14
HLA-F-225ENST00000482257 NEXMIFQ5QGS0 1516 aa22.19■■□□□ 1.14
HLA-F-225ENST00000482257 LRRC7Q96NW7 1537 aa22.19■■□□□ 1.14
HLA-F-225ENST00000482257 ALKQ9UM73 1620 aa22.17■■□□□ 1.14
HLA-F-225ENST00000482257 MYOM2P54296 1465 aa22.17■■□□□ 1.14
HLA-F-225ENST00000482257 KDM2AQ9Y2K7 1162 aa22.17■■□□□ 1.14
HLA-F-225ENST00000482257 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
HLA-F-225ENST00000482257 UBAP1LF5GYI3 381 aa22.15■■□□□ 1.14
HLA-F-225ENST00000482257 SLC26A8Q96RN1 970 aa22.14■■□□□ 1.13
HLA-F-225ENST00000482257 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
HLA-F-225ENST00000482257 PLEKHG1Q9ULL1 1385 aa22.12■■□□□ 1.13
HLA-F-225ENST00000482257 XIRP1Q702N8 1843 aaKnown RBP22.12■■□□□ 1.13
HLA-F-225ENST00000482257 NUTM2DQ5VT03 806 aaPredicted RBP22.1■■□□□ 1.13
HLA-F-225ENST00000482257 NRXN1Q9ULB1 1477 aa22.09■■□□□ 1.13
HLA-F-225ENST00000482257 PRAG1Q86YV5 1406 aa22.09■■□□□ 1.13
HLA-F-225ENST00000482257 ADGRF5Q8IZF2 1346 aa22.08■■□□□ 1.13
HLA-F-225ENST00000482257 NWD1Q149M9 1564 aa22.08■■□□□ 1.13
HLA-F-225ENST00000482257 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
HLA-F-225ENST00000482257 PIK3C2GO75747 1445 aa22.06■■□□□ 1.12
HLA-F-225ENST00000482257 BCANQ96GW7 911 aa22.06■■□□□ 1.12
HLA-F-225ENST00000482257 KIAA1210Q9ULL0 1709 aa22.04■■□□□ 1.12
HLA-F-225ENST00000482257 KCNA6P17658 529 aa22.04■■□□□ 1.12
HLA-F-225ENST00000482257 LAMC1P11047 1609 aa22.04■■□□□ 1.12
HLA-F-225ENST00000482257 NRXN3Q9Y4C0 1643 aa22.03■■□□□ 1.12
HLA-F-225ENST00000482257 SETBP1Q9Y6X0 1596 aa22.03■■□□□ 1.12
HLA-F-225ENST00000482257 CHD2O14647 1828 aaKnown RBP22.02■■□□□ 1.12
HLA-F-225ENST00000482257 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
HLA-F-225ENST00000482257 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.12
HLA-F-225ENST00000482257 TMEM94Q12767 1356 aa22.01■■□□□ 1.11
HLA-F-225ENST00000482257 TOM1O60784 492 aa22.01■■□□□ 1.11
HLA-F-225ENST00000482257 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
HLA-F-225ENST00000482257 NKTRP30414 1462 aaKnown RBP22.01■■□□□ 1.11
HLA-F-225ENST00000482257 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
HLA-F-225ENST00000482257 RBM33Q96EV2 1170 aaKnown RBP22■■□□□ 1.11
HLA-F-225ENST00000482257 DIP2AQ14689 1571 aa21.99■■□□□ 1.11
HLA-F-225ENST00000482257 RALGAPBQ86X10 1494 aa21.99■■□□□ 1.11
HLA-F-225ENST00000482257 TBX22Q9Y458 520 aa21.99■■□□□ 1.11
HLA-F-225ENST00000482257 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
HLA-F-225ENST00000482257 CFAP70Q5T0N1 1121 aa21.97■■□□□ 1.11
HLA-F-225ENST00000482257 ROCK2O75116 1388 aaKnown RBP21.97■■□□□ 1.11
HLA-F-225ENST00000482257 PTPRUQ92729 1446 aa21.96■■□□□ 1.11
HLA-F-225ENST00000482257 HSPA1LP34931 641 aa21.94■■□□□ 1.1
HLA-F-225ENST00000482257 PROSER2Q86WR7 435 aaPredicted RBP21.94■■□□□ 1.1
HLA-F-225ENST00000482257 GPRASP1Q5JY77 1395 aa21.92■■□□□ 1.1
HLA-F-225ENST00000482257 SETD1AO15047 1707 aaKnown RBP21.92■■□□□ 1.1
HLA-F-225ENST00000482257 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
HLA-F-225ENST00000482257 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
HLA-F-225ENST00000482257 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
HLA-F-225ENST00000482257 XRN1Q8IZH2 1706 aaKnown RBP21.89■■□□□ 1.1
HLA-F-225ENST00000482257 METP08581 1390 aa21.89■■□□□ 1.1
HLA-F-225ENST00000482257 ADGRB1O14514 1584 aa21.88■■□□□ 1.09
HLA-F-225ENST00000482257 TMEM132EQ6IEE7 984 aa21.87■■□□□ 1.09
HLA-F-225ENST00000482257 AMOTL2Q9Y2J4 779 aa21.85■■□□□ 1.09
HLA-F-225ENST00000482257 YTHDC2Q9H6S0 1430 aaKnown RBP21.85■■□□□ 1.09
HLA-F-225ENST00000482257 LRPPRCP42704 1394 aaKnown RBP21.85■■□□□ 1.09
HLA-F-225ENST00000482257 EIF3AQ14152 1382 aaKnown RBP21.85■■□□□ 1.09
HLA-F-225ENST00000482257 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
HLA-F-225ENST00000482257 MSH6P52701 1360 aa21.83■■□□□ 1.08
HLA-F-225ENST00000482257 FAM135BQ49AJ0 1406 aa21.82■■□□□ 1.08
HLA-F-225ENST00000482257 EIF4G2P78344 907 aaKnown RBP eCLIP21.82■■□□□ 1.08
HLA-F-225ENST00000482257 ABCC11Q96J66 1382 aa21.82■■□□□ 1.08
HLA-F-225ENST00000482257 NCOA3Q9Y6Q9 1424 aa21.81■■□□□ 1.08
HLA-F-225ENST00000482257 STK26Q9P289 416 aa21.81■■□□□ 1.08
HLA-F-225ENST00000482257 ROBO1Q9Y6N7 1651 aa21.81■■□□□ 1.08
HLA-F-225ENST00000482257 KNDC1Q76NI1 1749 aa21.8■■□□□ 1.08
HLA-F-225ENST00000482257 USP47Q96K76 1375 aa21.8■■□□□ 1.08
HLA-F-225ENST00000482257 DISP3Q9P2K9 1392 aa21.8■■□□□ 1.08
HLA-F-225ENST00000482257 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.8■■□□□ 1.08
HLA-F-225ENST00000482257 TRAK1Q9UPV9 953 aa21.79■■□□□ 1.08
HLA-F-225ENST00000482257 DLC1Q96QB1 1528 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms