RNA–Protein interactions for RNA: ENST00000482019.1

LINC02004-201, Transcript of long intergenic non-protein coding RNA 2004, humanhuman

TSL 2 BASIC

Gene LINC02004, Length 294 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02004-201ENST00000482019 PLEKHG1Q9ULL1 1385 aa15.42■□□□□ 0.06
LINC02004-201ENST00000482019 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
LINC02004-201ENST00000482019 PPP1R15AO75807 674 aaPredicted RBP15.41■□□□□ 0.06
LINC02004-201ENST00000482019 STRCP1A6NGW2 1772 aa15.41■□□□□ 0.06
LINC02004-201ENST00000482019 CLTCL1P53675 1640 aa15.4■□□□□ 0.06
LINC02004-201ENST00000482019 LRRC7Q96NW7 1537 aa15.4■□□□□ 0.06
LINC02004-201ENST00000482019 SETD5Q9C0A6 1442 aa15.4■□□□□ 0.06
LINC02004-201ENST00000482019 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
LINC02004-201ENST00000482019 BCANQ96GW7 911 aa15.38■□□□□ 0.05
LINC02004-201ENST00000482019 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
LINC02004-201ENST00000482019 DIP2AQ14689 1571 aa15.36■□□□□ 0.05
LINC02004-201ENST00000482019 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
LINC02004-201ENST00000482019 NKTRP30414 1462 aaKnown RBP15.35■□□□□ 0.05
LINC02004-201ENST00000482019 TOM1O60784 492 aa15.35■□□□□ 0.05
LINC02004-201ENST00000482019 KCNA6P17658 529 aa15.35■□□□□ 0.05
LINC02004-201ENST00000482019 KIF1BO60333 1816 aa15.34■□□□□ 0.05
LINC02004-201ENST00000482019 ZNF326Q5BKZ1 582 aaKnown RBP15.34■□□□□ 0.05
LINC02004-201ENST00000482019 MPHOSPH9Q99550 1183 aa15.34■□□□□ 0.05
LINC02004-201ENST00000482019 TBX22Q9Y458 520 aa15.34■□□□□ 0.05
LINC02004-201ENST00000482019 ADAMTS13Q76LX8 1427 aa15.34■□□□□ 0.05
LINC02004-201ENST00000482019 NUTM2DQ5VT03 806 aaPredicted RBP15.33■□□□□ 0.04
LINC02004-201ENST00000482019 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
LINC02004-201ENST00000482019 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.04
LINC02004-201ENST00000482019 PIK3R4Q99570 1358 aa15.32■□□□□ 0.04
LINC02004-201ENST00000482019 SETBP1Q9Y6X0 1596 aa15.32■□□□□ 0.04
LINC02004-201ENST00000482019 CCDC144AA2RUR9 1427 aa15.31■□□□□ 0.04
LINC02004-201ENST00000482019 CHD2O14647 1828 aaKnown RBP15.3■□□□□ 0.04
LINC02004-201ENST00000482019 TMEM94Q12767 1356 aa15.3■□□□□ 0.04
LINC02004-201ENST00000482019 FOXD1Q16676 465 aa15.3■□□□□ 0.04
LINC02004-201ENST00000482019 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
LINC02004-201ENST00000482019 ALKQ9UM73 1620 aa15.3■□□□□ 0.04
LINC02004-201ENST00000482019 XIRP1Q702N8 1843 aaKnown RBP15.29■□□□□ 0.04
LINC02004-201ENST00000482019 NRXN3Q9Y4C0 1643 aa15.29■□□□□ 0.04
LINC02004-201ENST00000482019 RPGRIP1LQ68CZ1 1315 aa15.28■□□□□ 0.04
LINC02004-201ENST00000482019 PROSER2Q86WR7 435 aaPredicted RBP15.28■□□□□ 0.04
LINC02004-201ENST00000482019 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
LINC02004-201ENST00000482019 HRCP23327 699 aa15.27■□□□□ 0.04
LINC02004-201ENST00000482019 PIP4K2BP78356 416 aa15.27■□□□□ 0.04
LINC02004-201ENST00000482019 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
LINC02004-201ENST00000482019 SPATA31E1Q6ZUB1 1445 aa15.25■□□□□ 0.03
LINC02004-201ENST00000482019 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
LINC02004-201ENST00000482019 PPLO60437 1756 aa15.24■□□□□ 0.03
LINC02004-201ENST00000482019 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
LINC02004-201ENST00000482019 MSH6P52701 1360 aa15.23■□□□□ 0.03
LINC02004-201ENST00000482019 AMOTL2Q9Y2J4 779 aa15.22■□□□□ 0.03
LINC02004-201ENST00000482019 PTPRUQ92729 1446 aa15.22■□□□□ 0.03
LINC02004-201ENST00000482019 RBM33Q96EV2 1170 aaKnown RBP15.21■□□□□ 0.03
LINC02004-201ENST00000482019 METP08581 1390 aa15.21■□□□□ 0.02
LINC02004-201ENST00000482019 ANKRD30BQ9BXX2 1392 aa15.21■□□□□ 0.02
LINC02004-201ENST00000482019 HSPA1LP34931 641 aa15.2■□□□□ 0.02
LINC02004-201ENST00000482019 IFT172Q9UG01 1749 aa15.2■□□□□ 0.02
LINC02004-201ENST00000482019 SETD1AO15047 1707 aaKnown RBP15.19■□□□□ 0.02
LINC02004-201ENST00000482019 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
LINC02004-201ENST00000482019 RGL3Q3MIN7 710 aa15.18■□□□□ 0.02
LINC02004-201ENST00000482019 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
LINC02004-201ENST00000482019 PRAG1Q86YV5 1406 aa15.17■□□□□ 0.02
LINC02004-201ENST00000482019 C19orf44Q9H6X5 657 aa15.15■□□□□ 0.02
LINC02004-201ENST00000482019 DCCP43146 1447 aa15.15■□□□□ 0.02
LINC02004-201ENST00000482019 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
LINC02004-201ENST00000482019 ADGRF5Q8IZF2 1346 aa15.15■□□□□ 0.02
LINC02004-201ENST00000482019 ROBO1Q9Y6N7 1651 aa15.14■□□□□ 0.01
LINC02004-201ENST00000482019 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
LINC02004-201ENST00000482019 PIK3C2GO75747 1445 aa15.14■□□□□ 0.01
LINC02004-201ENST00000482019 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.14■□□□□ 0.01
LINC02004-201ENST00000482019 MYOM2P54296 1465 aa15.14■□□□□ 0.01
LINC02004-201ENST00000482019 ATF3P18847 181 aa15.13■□□□□ 0.01
LINC02004-201ENST00000482019 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
LINC02004-201ENST00000482019 ADGRL3Q9HAR2 1447 aa15.11■□□□□ 0.01
LINC02004-201ENST00000482019 NRXN1Q9ULB1 1477 aa15.11■□□□□ 0.01
LINC02004-201ENST00000482019 LAMC1P11047 1609 aa15.1■□□□□ 0.01
LINC02004-201ENST00000482019 ROBO2Q9HCK4 1378 aa15.1■□□□□ 0.01
LINC02004-201ENST00000482019 DISP3Q9P2K9 1392 aa15.1■□□□□ 0.01
LINC02004-201ENST00000482019 NALCNQ8IZF0 1738 aa15.09■□□□□ 0.01
LINC02004-201ENST00000482019 ASXL1Q8IXJ9 1541 aa15.08■□□□□ 0.01
LINC02004-201ENST00000482019 TECPR2O15040 1411 aa15.08■□□□□ 0
LINC02004-201ENST00000482019 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
LINC02004-201ENST00000482019 MED1Q15648 1581 aaPredicted RBP15.07■□□□□ 0
LINC02004-201ENST00000482019 KNDC1Q76NI1 1749 aa15.06■□□□□ 0
LINC02004-201ENST00000482019 STAC3Q96MF2 364 aa15.06■□□□□ 0
LINC02004-201ENST00000482019 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
LINC02004-201ENST00000482019 MST1RQ04912 1400 aa15.06■□□□□ 0
LINC02004-201ENST00000482019 ABCC11Q96J66 1382 aa15.05■□□□□ -0
LINC02004-201ENST00000482019 PHLPP1O60346 1717 aa15.04■□□□□ -0
LINC02004-201ENST00000482019 AHDC1Q5TGY3 1603 aaPredicted RBP15.04■□□□□ -0
LINC02004-201ENST00000482019 YTHDC2Q9H6S0 1430 aaKnown RBP15.04■□□□□ -0
LINC02004-201ENST00000482019 TMEM132EQ6IEE7 984 aa15.03■□□□□ -0
LINC02004-201ENST00000482019 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
LINC02004-201ENST00000482019 CFAP70Q5T0N1 1121 aa15.02■□□□□ -0
LINC02004-201ENST00000482019 BRINP3Q76B58 766 aa15.02■□□□□ -0
LINC02004-201ENST00000482019 DCAF11Q8TEB1 546 aa15.02■□□□□ -0
LINC02004-201ENST00000482019 STK26Q9P289 416 aa15.02■□□□□ -0
LINC02004-201ENST00000482019 COL16A1Q07092 1604 aaPredicted RBP15.02□□□□□ -0.01
LINC02004-201ENST00000482019 CDC42BPGQ6DT37 1551 aa15.02□□□□□ -0.01
LINC02004-201ENST00000482019 SIRT1Q96EB6 747 aa15□□□□□ -0.01
LINC02004-201ENST00000482019 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
LINC02004-201ENST00000482019 JCADQ9P266 1359 aa14.99□□□□□ -0.01
LINC02004-201ENST00000482019 ADGRB1O14514 1584 aa14.99□□□□□ -0.01
LINC02004-201ENST00000482019 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
LINC02004-201ENST00000482019 KDM2AQ9Y2K7 1162 aa14.99□□□□□ -0.01
LINC02004-201ENST00000482019 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms