RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.22■■■□□ 2.91
SHISA4-203ENST00000481699 TIMELESSQ9UNS1 1208 aa33.22■■■□□ 2.91
SHISA4-203ENST00000481699 EID1Q9Y6B2 187 aa33.22■■■□□ 2.91
SHISA4-203ENST00000481699 MYO5BQ9ULV0 1848 aa33.21■■■□□ 2.91
SHISA4-203ENST00000481699 RIMS2Q9UQ26 1411 aa33.21■■■□□ 2.91
SHISA4-203ENST00000481699 PPP1R15AO75807 674 aaPredicted RBP33.21■■■□□ 2.91
SHISA4-203ENST00000481699 DCAF11Q8TEB1 546 aa33.21■■■□□ 2.91
SHISA4-203ENST00000481699 L3MBTL2Q969R5 705 aa33.21■■■□□ 2.91
SHISA4-203ENST00000481699 KDM2AQ9Y2K7 1162 aa33.18■■■□□ 2.9
SHISA4-203ENST00000481699 VGFO15240 615 aaPredicted RBP33.16■■■□□ 2.9
SHISA4-203ENST00000481699 NUTM2DQ5VT03 806 aaPredicted RBP33.16■■■□□ 2.9
SHISA4-203ENST00000481699 TXNDC2Q86VQ3 553 aa33.16■■■□□ 2.9
SHISA4-203ENST00000481699 STAC3Q96MF2 364 aa33.16■■■□□ 2.9
SHISA4-203ENST00000481699 SLIT1O75093 1534 aa33.15■■■□□ 2.9
SHISA4-203ENST00000481699 ANKLE2Q86XL3 938 aa33.15■■■□□ 2.9
SHISA4-203ENST00000481699 NEXMIFQ5QGS0 1516 aa33.13■■■□□ 2.89
SHISA4-203ENST00000481699 ARHGAP23Q9P227 1491 aa33.13■■■□□ 2.89
SHISA4-203ENST00000481699 ZFYVE9O95405 1425 aa33.12■■■□□ 2.89
SHISA4-203ENST00000481699 BCANQ96GW7 911 aa33.1■■■□□ 2.89
SHISA4-203ENST00000481699 PPLO60437 1756 aa33.09■■■□□ 2.89
SHISA4-203ENST00000481699 SCAF11Q99590 1463 aaKnown RBP33.08■■■□□ 2.89
SHISA4-203ENST00000481699 MYOM2P54296 1465 aa33.07■■■□□ 2.88
SHISA4-203ENST00000481699 ZEB1P37275 1124 aaPredicted RBP33.07■■■□□ 2.88
SHISA4-203ENST00000481699 LTKP29376 864 aa33.06■■■□□ 2.88
SHISA4-203ENST00000481699 IFT172Q9UG01 1749 aa33.05■■■□□ 2.88
SHISA4-203ENST00000481699 ADGRF5Q8IZF2 1346 aa33.03■■■□□ 2.88
SHISA4-203ENST00000481699 NCKAP5LQ9HCH0 1330 aa33.02■■■□□ 2.88
SHISA4-203ENST00000481699 DISP3Q9P2K9 1392 aa33.02■■■□□ 2.88
SHISA4-203ENST00000481699 SENP3Q9H4L4 574 aaPredicted RBP33.02■■■□□ 2.88
SHISA4-203ENST00000481699 ILDR2Q71H61 639 aa33.01■■■□□ 2.87
SHISA4-203ENST00000481699 PLEKHG1Q9ULL1 1385 aa33■■■□□ 2.87
SHISA4-203ENST00000481699 STRCQ7RTU9 1775 aa32.97■■■□□ 2.87
SHISA4-203ENST00000481699 POLR1AO95602 1720 aaPredicted RBP32.96■■■□□ 2.87
SHISA4-203ENST00000481699 PRAG1Q86YV5 1406 aa32.95■■■□□ 2.87
SHISA4-203ENST00000481699 NPHP4O75161 1426 aaPredicted RBP32.94■■■□□ 2.86
SHISA4-203ENST00000481699 NRXN1Q9ULB1 1477 aa32.94■■■□□ 2.86
SHISA4-203ENST00000481699 PIK3C2GO75747 1445 aa32.94■■■□□ 2.86
SHISA4-203ENST00000481699 MED14O60244 1454 aa32.9■■■□□ 2.86
SHISA4-203ENST00000481699 SETBP1Q9Y6X0 1596 aa32.88■■■□□ 2.85
SHISA4-203ENST00000481699 NBPF8Q3BBV2 869 aa32.88■■■□□ 2.85
SHISA4-203ENST00000481699 CFAP70Q5T0N1 1121 aa32.87■■■□□ 2.85
SHISA4-203ENST00000481699 SLC26A8Q96RN1 970 aa32.87■■■□□ 2.85
SHISA4-203ENST00000481699 C14orf93Q9H972 538 aaKnown RBP32.86■■■□□ 2.85
SHISA4-203ENST00000481699 DMRT2Q9Y5R5 561 aa32.86■■■□□ 2.85
SHISA4-203ENST00000481699 IQGAP1P46940 1657 aa32.85■■■□□ 2.85
SHISA4-203ENST00000481699 LAMC1P11047 1609 aa32.83■■■□□ 2.85
SHISA4-203ENST00000481699 ALKQ9UM73 1620 aa32.82■■■□□ 2.84
SHISA4-203ENST00000481699 TBX22Q9Y458 520 aa32.82■■■□□ 2.84
SHISA4-203ENST00000481699 SOCS7O14512 581 aa32.81■■■□□ 2.84
SHISA4-203ENST00000481699 DIP2AQ14689 1571 aa32.81■■■□□ 2.84
SHISA4-203ENST00000481699 ADAMTS13Q76LX8 1427 aa32.81■■■□□ 2.84
SHISA4-203ENST00000481699 ROCK2O75116 1388 aaKnown RBP32.8■■■□□ 2.84
SHISA4-203ENST00000481699 NRXN3Q9Y4C0 1643 aa32.8■■■□□ 2.84
SHISA4-203ENST00000481699 KIAA1210Q9ULL0 1709 aa32.77■■■□□ 2.84
SHISA4-203ENST00000481699 RALGAPBQ86X10 1494 aa32.77■■■□□ 2.84
SHISA4-203ENST00000481699 TRPM1Q7Z4N2 1603 aa32.76■■■□□ 2.83
SHISA4-203ENST00000481699 NBPF1Q3BBV0 1214 aa32.74■■■□□ 2.83
SHISA4-203ENST00000481699 TMEM132EQ6IEE7 984 aa32.74■■■□□ 2.83
SHISA4-203ENST00000481699 CARD11Q9BXL7 1154 aa32.73■■■□□ 2.83
SHISA4-203ENST00000481699 METP08581 1390 aa32.71■■■□□ 2.83
SHISA4-203ENST00000481699 PIK3R4Q99570 1358 aa32.7■■■□□ 2.83
SHISA4-203ENST00000481699 STK26Q9P289 416 aa32.68■■■□□ 2.82
SHISA4-203ENST00000481699 SETD1AO15047 1707 aaKnown RBP32.67■■■□□ 2.82
SHISA4-203ENST00000481699 LTBP4Q8N2S1 1624 aa32.66■■■□□ 2.82
SHISA4-203ENST00000481699 GPRASP1Q5JY77 1395 aa32.65■■■□□ 2.82
SHISA4-203ENST00000481699 YTHDC2Q9H6S0 1430 aaKnown RBP32.65■■■□□ 2.82
SHISA4-203ENST00000481699 ADGRB1O14514 1584 aa32.65■■■□□ 2.82
SHISA4-203ENST00000481699 LRPPRCP42704 1394 aaKnown RBP32.64■■■□□ 2.82
SHISA4-203ENST00000481699 ASXL1Q8IXJ9 1541 aa32.64■■■□□ 2.82
SHISA4-203ENST00000481699 AMOTL2Q9Y2J4 779 aa32.63■■■□□ 2.81
SHISA4-203ENST00000481699 TRAK1Q9UPV9 953 aa32.61■■■□□ 2.81
SHISA4-203ENST00000481699 KCNA6P17658 529 aa32.6■■■□□ 2.81
SHISA4-203ENST00000481699 EIF3AQ14152 1382 aaKnown RBP32.58■■■□□ 2.81
SHISA4-203ENST00000481699 PTPRUQ92729 1446 aa32.58■■■□□ 2.81
SHISA4-203ENST00000481699 ABCC11Q96J66 1382 aa32.58■■■□□ 2.81
SHISA4-203ENST00000481699 POGKQ9P215 609 aa32.53■■■□□ 2.8
SHISA4-203ENST00000481699 USP47Q96K76 1375 aa32.53■■■□□ 2.8
SHISA4-203ENST00000481699 CHD2O14647 1828 aaKnown RBP32.52■■■□□ 2.8
SHISA4-203ENST00000481699 EIF4G2P78344 907 aaKnown RBP eCLIP32.52■■■□□ 2.8
SHISA4-203ENST00000481699 ZNF335Q9H4Z2 1342 aaPredicted RBP32.51■■■□□ 2.8
SHISA4-203ENST00000481699 TECPR2O15040 1411 aa32.51■■■□□ 2.79
SHISA4-203ENST00000481699 NWD1Q149M9 1564 aa32.5■■■□□ 2.79
SHISA4-203ENST00000481699 IQSEC2Q5JU85 1478 aa32.49■■■□□ 2.79
SHISA4-203ENST00000481699 XRN1Q8IZH2 1706 aaKnown RBP32.49■■■□□ 2.79
SHISA4-203ENST00000481699 DLC1Q96QB1 1528 aa32.49■■■□□ 2.79
SHISA4-203ENST00000481699 PTCH1Q13635 1447 aa32.49■■■□□ 2.79
SHISA4-203ENST00000481699 KNDC1Q76NI1 1749 aa32.48■■■□□ 2.79
SHISA4-203ENST00000481699 SIRT1Q96EB6 747 aa32.48■■■□□ 2.79
SHISA4-203ENST00000481699 PRAM1Q96QH2 718 aa32.48■■■□□ 2.79
SHISA4-203ENST00000481699 NKTRP30414 1462 aaKnown RBP32.48■■■□□ 2.79
SHISA4-203ENST00000481699 CPS1P31327 1500 aa32.47■■■□□ 2.79
SHISA4-203ENST00000481699 PROSER2Q86WR7 435 aaPredicted RBP32.47■■■□□ 2.79
SHISA4-203ENST00000481699 ROBO2Q9HCK4 1378 aa32.46■■■□□ 2.79
SHISA4-203ENST00000481699 FAM135BQ49AJ0 1406 aa32.46■■■□□ 2.79
SHISA4-203ENST00000481699 CENPJQ9HC77 1338 aaPredicted RBP32.46■■■□□ 2.79
SHISA4-203ENST00000481699 SAFB2Q14151 953 aaKnown RBP eCLIP32.44■■■□□ 2.78
SHISA4-203ENST00000481699 WAPLQ7Z5K2 1190 aa32.43■■■□□ 2.78
SHISA4-203ENST00000481699 HSPA5P11021 654 aaKnown RBP32.42■■■□□ 2.78
SHISA4-203ENST00000481699 ARHGEF28Q8N1W1 1705 aaKnown RBP32.42■■■□□ 2.78
SHISA4-203ENST00000481699 ST20-MTHFSA0A0A6YYL1 179 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms