RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 IQGAP3Q86VI3 1631 aa14.15□□□□□ -0.14
CLIP4-210ENST00000481628 PLEKHG1Q9ULL1 1385 aa14.14□□□□□ -0.15
CLIP4-210ENST00000481628 FAM50AQ14320 339 aaKnown RBP14.14□□□□□ -0.15
CLIP4-210ENST00000481628 E9PCH4 1651 aa14.13□□□□□ -0.15
CLIP4-210ENST00000481628 MYO5BQ9ULV0 1848 aa14.12□□□□□ -0.15
CLIP4-210ENST00000481628 RIMS2Q9UQ26 1411 aa14.11□□□□□ -0.15
CLIP4-210ENST00000481628 DIP2AQ14689 1571 aa14.1□□□□□ -0.15
CLIP4-210ENST00000481628 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
CLIP4-210ENST00000481628 CHD2O14647 1828 aaKnown RBP14.1□□□□□ -0.15
CLIP4-210ENST00000481628 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
CLIP4-210ENST00000481628 NCOA3Q9Y6Q9 1424 aa14.08□□□□□ -0.15
CLIP4-210ENST00000481628 ADAMTS13Q76LX8 1427 aa14.07□□□□□ -0.16
CLIP4-210ENST00000481628 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
CLIP4-210ENST00000481628 HDGFP51858 240 aaKnown RBP14.06□□□□□ -0.16
CLIP4-210ENST00000481628 PROSER2Q86WR7 435 aaPredicted RBP14.06□□□□□ -0.16
CLIP4-210ENST00000481628 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
CLIP4-210ENST00000481628 MSH6P52701 1360 aa14.06□□□□□ -0.16
CLIP4-210ENST00000481628 PIK3R4Q99570 1358 aa14.06□□□□□ -0.16
CLIP4-210ENST00000481628 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLIP4-210ENST00000481628 RGS17Q9UGC6 210 aaPredicted RBP14.03□□□□□ -0.16
CLIP4-210ENST00000481628 TRPM2O94759 1503 aa14.02□□□□□ -0.16
CLIP4-210ENST00000481628 NUP155O75694 1391 aa14.02□□□□□ -0.17
CLIP4-210ENST00000481628 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
CLIP4-210ENST00000481628 SETBP1Q9Y6X0 1596 aa14.01□□□□□ -0.17
CLIP4-210ENST00000481628 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-210ENST00000481628 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-210ENST00000481628 COL16A1Q07092 1604 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-210ENST00000481628 NRXN3Q9Y4C0 1643 aa14.01□□□□□ -0.17
CLIP4-210ENST00000481628 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
CLIP4-210ENST00000481628 PHLPP1O60346 1717 aa14□□□□□ -0.17
CLIP4-210ENST00000481628 XRN1Q8IZH2 1706 aaKnown RBP13.99□□□□□ -0.17
CLIP4-210ENST00000481628 BCANQ96GW7 911 aa13.99□□□□□ -0.17
CLIP4-210ENST00000481628 SLAIN2Q9P270 581 aa13.99□□□□□ -0.17
CLIP4-210ENST00000481628 AHDC1Q5TGY3 1603 aaPredicted RBP13.99□□□□□ -0.17
CLIP4-210ENST00000481628 RRBP1Q9P2E9 1410 aaKnown RBP13.98□□□□□ -0.17
CLIP4-210ENST00000481628 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
CLIP4-210ENST00000481628 DCCP43146 1447 aa13.98□□□□□ -0.17
CLIP4-210ENST00000481628 PTPRUQ92729 1446 aa13.98□□□□□ -0.17
CLIP4-210ENST00000481628 JCADQ9P266 1359 aa13.97□□□□□ -0.17
CLIP4-210ENST00000481628 CHGAP10645 457 aaKnown RBP13.96□□□□□ -0.17
CLIP4-210ENST00000481628 NEXMIFQ5QGS0 1516 aa13.95□□□□□ -0.18
CLIP4-210ENST00000481628 CLTCL1P53675 1640 aa13.94□□□□□ -0.18
CLIP4-210ENST00000481628 NAIPQ13075 1403 aa13.94□□□□□ -0.18
CLIP4-210ENST00000481628 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
CLIP4-210ENST00000481628 C19orf44Q9H6X5 657 aa13.94□□□□□ -0.18
CLIP4-210ENST00000481628 SHPRHQ149N8 1683 aa13.94□□□□□ -0.18
CLIP4-210ENST00000481628 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
CLIP4-210ENST00000481628 POTEAQ6S8J7 498 aa13.92□□□□□ -0.18
CLIP4-210ENST00000481628 SPATA31A6Q5VVP1 1343 aa13.91□□□□□ -0.18
CLIP4-210ENST00000481628 LRP6O75581 1613 aa13.91□□□□□ -0.18
CLIP4-210ENST00000481628 ITGAEP38570 1179 aa13.91□□□□□ -0.18
CLIP4-210ENST00000481628 AMOTL2Q9Y2J4 779 aa13.91□□□□□ -0.18
CLIP4-210ENST00000481628 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
CLIP4-210ENST00000481628 HFM1A2PYH4 1435 aa13.9□□□□□ -0.19
CLIP4-210ENST00000481628 MST1RQ04912 1400 aa13.9□□□□□ -0.19
CLIP4-210ENST00000481628 METP08581 1390 aa13.89□□□□□ -0.19
CLIP4-210ENST00000481628 ATF3P18847 181 aa13.89□□□□□ -0.19
CLIP4-210ENST00000481628 NHSL1Q5SYE7 1610 aa13.89□□□□□ -0.19
CLIP4-210ENST00000481628 ASXL1Q8IXJ9 1541 aa13.89□□□□□ -0.19
CLIP4-210ENST00000481628 ADGRL3Q9HAR2 1447 aa13.89□□□□□ -0.19
CLIP4-210ENST00000481628 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
CLIP4-210ENST00000481628 C14orf37Q86TY3 774 aa13.88□□□□□ -0.19
CLIP4-210ENST00000481628 KIF1BO60333 1816 aa13.87□□□□□ -0.19
CLIP4-210ENST00000481628 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
CLIP4-210ENST00000481628 PTCH1Q13635 1447 aa13.87□□□□□ -0.19
CLIP4-210ENST00000481628 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
CLIP4-210ENST00000481628 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
CLIP4-210ENST00000481628 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
CLIP4-210ENST00000481628 LAMC1P11047 1609 aa13.85□□□□□ -0.19
CLIP4-210ENST00000481628 ZNF326Q5BKZ1 582 aaKnown RBP13.84□□□□□ -0.19
CLIP4-210ENST00000481628 PPLO60437 1756 aa13.81□□□□□ -0.2
CLIP4-210ENST00000481628 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
CLIP4-210ENST00000481628 ZNF772Q68DY9 489 aaPredicted RBP13.8□□□□□ -0.2
CLIP4-210ENST00000481628 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
CLIP4-210ENST00000481628 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
CLIP4-210ENST00000481628 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
CLIP4-210ENST00000481628 PNPLA6Q8IY17 1366 aa13.78□□□□□ -0.2
CLIP4-210ENST00000481628 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
CLIP4-210ENST00000481628 CDC42BPGQ6DT37 1551 aa13.76□□□□□ -0.21
CLIP4-210ENST00000481628 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
CLIP4-210ENST00000481628 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
CLIP4-210ENST00000481628 SPATA31E1Q6ZUB1 1445 aa13.75□□□□□ -0.21
CLIP4-210ENST00000481628 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
CLIP4-210ENST00000481628 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
CLIP4-210ENST00000481628 TECPR2O15040 1411 aa13.74□□□□□ -0.21
CLIP4-210ENST00000481628 TRIM52Q96A61 297 aa13.74□□□□□ -0.21
CLIP4-210ENST00000481628 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
CLIP4-210ENST00000481628 COL22A1Q8NFW1 1626 aaPredicted RBP13.73□□□□□ -0.21
CLIP4-210ENST00000481628 KNDC1Q76NI1 1749 aa13.73□□□□□ -0.21
CLIP4-210ENST00000481628 AFF2P51816 1311 aa13.72□□□□□ -0.21
CLIP4-210ENST00000481628 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
CLIP4-210ENST00000481628 ANKRD30BQ9BXX2 1392 aa13.71□□□□□ -0.22
CLIP4-210ENST00000481628 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
CLIP4-210ENST00000481628 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
CLIP4-210ENST00000481628 RXRBP28702 533 aa13.7□□□□□ -0.22
CLIP4-210ENST00000481628 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
CLIP4-210ENST00000481628 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
CLIP4-210ENST00000481628 PIK3C2GO75747 1445 aa13.7□□□□□ -0.22
CLIP4-210ENST00000481628 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLIP4-210ENST00000481628 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms