RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 GCC2Q8IWJ2 1684 aa8.68□□□□□ -1.02
TFE3-202ENST00000481606 MYO5BQ9ULV0 1848 aa8.68□□□□□ -1.02
TFE3-202ENST00000481606 KCNA4P22459 653 aa8.67□□□□□ -1.02
TFE3-202ENST00000481606 MSH6P52701 1360 aa8.67□□□□□ -1.02
TFE3-202ENST00000481606 IDI1Q13907 227 aa8.67□□□□□ -1.02
TFE3-202ENST00000481606 ANKRD30AQ9BXX3 1397 aa8.67□□□□□ -1.02
TFE3-202ENST00000481606 COL16A1Q07092 1604 aaPredicted RBP8.66□□□□□ -1.02
TFE3-202ENST00000481606 CHD2O14647 1828 aaKnown RBP8.66□□□□□ -1.02
TFE3-202ENST00000481606 BCANQ96GW7 911 aa8.65□□□□□ -1.02
TFE3-202ENST00000481606 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
TFE3-202ENST00000481606 ADGRL2O95490 1459 aa8.64□□□□□ -1.03
TFE3-202ENST00000481606 ZFYVE9O95405 1425 aa8.64□□□□□ -1.03
TFE3-202ENST00000481606 JCADQ9P266 1359 aa8.64□□□□□ -1.03
TFE3-202ENST00000481606 LOC105371045A0A1W2PR82 267 aa8.64□□□□□ -1.03
TFE3-202ENST00000481606 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
TFE3-202ENST00000481606 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
TFE3-202ENST00000481606 PLEKHG1Q9ULL1 1385 aa8.63□□□□□ -1.03
TFE3-202ENST00000481606 TMEM131LA2VDJ0 1609 aa8.63□□□□□ -1.03
TFE3-202ENST00000481606 LRP6O75581 1613 aa8.63□□□□□ -1.03
TFE3-202ENST00000481606 APLP2Q06481 763 aa8.63□□□□□ -1.03
TFE3-202ENST00000481606 PPP4R3CPQ6ZMV5 832 aa8.63□□□□□ -1.03
TFE3-202ENST00000481606 PPP1R15AO75807 674 aaPredicted RBP8.62□□□□□ -1.03
TFE3-202ENST00000481606 SLC52A1Q9NWF4 448 aa8.62□□□□□ -1.03
TFE3-202ENST00000481606 SLAIN2Q9P270 581 aa8.62□□□□□ -1.03
TFE3-202ENST00000481606 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
TFE3-202ENST00000481606 AHDC1Q5TGY3 1603 aaPredicted RBP8.62□□□□□ -1.03
TFE3-202ENST00000481606 UNC13BO14795 1591 aa8.61□□□□□ -1.03
TFE3-202ENST00000481606 DIP2AQ14689 1571 aa8.61□□□□□ -1.03
TFE3-202ENST00000481606 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.61□□□□□ -1.03
TFE3-202ENST00000481606 ANKRD50Q9ULJ7 1429 aa8.61□□□□□ -1.03
TFE3-202ENST00000481606 E9PCH4 1651 aa8.6□□□□□ -1.03
TFE3-202ENST00000481606 MEX3CQ5U5Q3 659 aaKnown RBP8.6□□□□□ -1.03
TFE3-202ENST00000481606 C14orf37Q86TY3 774 aa8.6□□□□□ -1.03
TFE3-202ENST00000481606 SPATA31A6Q5VVP1 1343 aa8.59□□□□□ -1.03
TFE3-202ENST00000481606 ADAMTS13Q76LX8 1427 aa8.59□□□□□ -1.03
TFE3-202ENST00000481606 NCOA3Q9Y6Q9 1424 aa8.59□□□□□ -1.03
TFE3-202ENST00000481606 TRPM2O94759 1503 aa8.59□□□□□ -1.03
TFE3-202ENST00000481606 CHGAP10645 457 aaKnown RBP8.58□□□□□ -1.04
TFE3-202ENST00000481606 FAM50AQ14320 339 aaKnown RBP8.58□□□□□ -1.04
TFE3-202ENST00000481606 TRIM52Q96A61 297 aa8.58□□□□□ -1.04
TFE3-202ENST00000481606 HDGFP51858 240 aaKnown RBP8.57□□□□□ -1.04
TFE3-202ENST00000481606 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
TFE3-202ENST00000481606 TBX22Q9Y458 520 aa8.57□□□□□ -1.04
TFE3-202ENST00000481606 IQGAP3Q86VI3 1631 aa8.57□□□□□ -1.04
TFE3-202ENST00000481606 XRN1Q8IZH2 1706 aaKnown RBP8.57□□□□□ -1.04
TFE3-202ENST00000481606 ASXL1Q8IXJ9 1541 aa8.56□□□□□ -1.04
TFE3-202ENST00000481606 NHSL1Q5SYE7 1610 aa8.56□□□□□ -1.04
TFE3-202ENST00000481606 ATF3P18847 181 aa8.56□□□□□ -1.04
TFE3-202ENST00000481606 ZNF772Q68DY9 489 aaPredicted RBP8.56□□□□□ -1.04
TFE3-202ENST00000481606 CADPS2Q86UW7 1296 aa8.56□□□□□ -1.04
TFE3-202ENST00000481606 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.56□□□□□ -1.04
TFE3-202ENST00000481606 PIK3R4Q99570 1358 aa8.56□□□□□ -1.04
TFE3-202ENST00000481606 NRXN3Q9Y4C0 1643 aa8.55□□□□□ -1.04
TFE3-202ENST00000481606 UPF1Q92900 1129 aaKnown RBP eCLIP8.55□□□□□ -1.04
TFE3-202ENST00000481606 DCCP43146 1447 aa8.54□□□□□ -1.04
TFE3-202ENST00000481606 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
TFE3-202ENST00000481606 CDK12Q9NYV4 1490 aaPredicted RBP8.54□□□□□ -1.04
TFE3-202ENST00000481606 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
TFE3-202ENST00000481606 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
TFE3-202ENST00000481606 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
TFE3-202ENST00000481606 C19orf44Q9H6X5 657 aa8.54□□□□□ -1.04
TFE3-202ENST00000481606 SETBP1Q9Y6X0 1596 aa8.53□□□□□ -1.04
TFE3-202ENST00000481606 BRINP3Q76B58 766 aa8.53□□□□□ -1.04
TFE3-202ENST00000481606 SPHKAPQ2M3C7 1700 aa8.53□□□□□ -1.04
TFE3-202ENST00000481606 NALCNQ8IZF0 1738 aa8.53□□□□□ -1.04
TFE3-202ENST00000481606 MST1RQ04912 1400 aa8.53□□□□□ -1.04
TFE3-202ENST00000481606 RXRBP28702 533 aa8.52□□□□□ -1.05
TFE3-202ENST00000481606 AMOTL2Q9Y2J4 779 aa8.52□□□□□ -1.05
TFE3-202ENST00000481606 RGS12O14924 1447 aa8.52□□□□□ -1.05
TFE3-202ENST00000481606 SETD5Q9C0A6 1442 aa8.52□□□□□ -1.05
TFE3-202ENST00000481606 AFF2P51816 1311 aa8.52□□□□□ -1.05
TFE3-202ENST00000481606 ROCK1Q13464 1354 aa8.51□□□□□ -1.05
TFE3-202ENST00000481606 NCBP3Q53F19 620 aaKnown RBP8.51□□□□□ -1.05
TFE3-202ENST00000481606 ADGRL3Q9HAR2 1447 aa8.51□□□□□ -1.05
TFE3-202ENST00000481606 NUP155O75694 1391 aa8.5□□□□□ -1.05
TFE3-202ENST00000481606 PNPLA6Q8IY17 1366 aa8.49□□□□□ -1.05
TFE3-202ENST00000481606 NEXMIFQ5QGS0 1516 aa8.49□□□□□ -1.05
TFE3-202ENST00000481606 METP08581 1390 aa8.48□□□□□ -1.05
TFE3-202ENST00000481606 CLTCL1P53675 1640 aa8.48□□□□□ -1.05
TFE3-202ENST00000481606 DDX17Q92841 729 aaKnown RBP8.48□□□□□ -1.05
TFE3-202ENST00000481606 C8orf37Q96NL8 207 aa8.48□□□□□ -1.05
TFE3-202ENST00000481606 ZNF326Q5BKZ1 582 aaKnown RBP8.47□□□□□ -1.05
TFE3-202ENST00000481606 LRRC59Q96AG4 307 aaKnown RBP8.47□□□□□ -1.05
TFE3-202ENST00000481606 LAMC1P11047 1609 aa8.47□□□□□ -1.05
TFE3-202ENST00000481606 KIF1BO60333 1816 aa8.46□□□□□ -1.06
TFE3-202ENST00000481606 RBM6P78332 1123 aaKnown RBP8.46□□□□□ -1.06
TFE3-202ENST00000481606 C1orf167Q5SNV9 1468 aa8.45□□□□□ -1.06
TFE3-202ENST00000481606 ADAMTS2O95450 1211 aa8.45□□□□□ -1.06
TFE3-202ENST00000481606 ITGAEP38570 1179 aa8.45□□□□□ -1.06
TFE3-202ENST00000481606 QTRT2Q9H974 415 aaKnown RBP8.45□□□□□ -1.06
TFE3-202ENST00000481606 PTCH1Q13635 1447 aa8.45□□□□□ -1.06
TFE3-202ENST00000481606 ATAD2Q6PL18 1390 aa8.44□□□□□ -1.06
TFE3-202ENST00000481606 COL22A1Q8NFW1 1626 aaPredicted RBP8.43□□□□□ -1.06
TFE3-202ENST00000481606 NGLY1Q96IV0 654 aa8.43□□□□□ -1.06
TFE3-202ENST00000481606 SLC4A1APQ9BWU0 796 aaKnown RBP8.42□□□□□ -1.06
TFE3-202ENST00000481606 ROBO2Q9HCK4 1378 aa8.42□□□□□ -1.06
TFE3-202ENST00000481606 MARF1Q9Y4F3 1742 aaKnown RBP8.41□□□□□ -1.06
TFE3-202ENST00000481606 CDC42BPGQ6DT37 1551 aa8.41□□□□□ -1.06
TFE3-202ENST00000481606 ATRNO75882 1429 aa8.41□□□□□ -1.06
TFE3-202ENST00000481606 PRAG1Q86YV5 1406 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms